Build: #1 failed

Job: Pipeline PR Test 6.7.4 failed

Stages & jobs

  1. Default Stage

Build log

The build generated 193 lines of output. Download or view full build log. You can find logs from previous runs here.

20-May-2026 16:19:44 Build PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal - Pipeline PR Test 6.7.4 #1 (PIPESPECS-PPRT589-PPRT674-1) is being prepared for building on agent casaci-4.cv.nrao.edu, bamboo version: 9.6.17
20-May-2026 16:19:44 Remote agent on host casaci-4.cv.nrao.edu
20-May-2026 16:19:44 Build working directory is /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:44 Executing build PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal - Pipeline PR Test 6.7.4 #1 (PIPESPECS-PPRT589-PPRT674-1)
20-May-2026 16:19:44 Starting task 'Source Code Checkout' of type 'com.atlassian.bamboo.plugins.vcs:task.vcs.checkout'
20-May-2026 16:19:44 Build always requires a clean checkout
20-May-2026 16:19:44 Cleaning build directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'
20-May-2026 16:19:44 Checking out into /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:44 Updating source code to revision: 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:44 /usr/bin/git version
20-May-2026 16:19:44 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:44 /usr/bin/git ls-remote ssh://0c8f5f11-393f-4849-ba21-3cdffee47bd8@127.0.0.1:43903/pipe/pipeline.git
20-May-2026 16:19:45 Fetching 'refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal' from 'ssh://git@open-bitbucket.nrao.edu:7999/pipe/pipeline.git'.
20-May-2026 16:19:45 /usr/bin/git fetch -f -p ssh://0c8f5f11-393f-4849-ba21-3cdffee47bd8@127.0.0.1:43903/pipe/pipeline.git +refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal:refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal --update-head-ok --progress --verbose
20-May-2026 16:19:45 Warning: Permanently added '[127.0.0.1]:43903' (RSA) to the list of known hosts.
20-May-2026 16:19:45 X11 forwarding request failed on channel 0
20-May-2026 16:19:45 remote: Enumerating objects: 9, done.       
20-May-2026 16:19:45 remote: Counting objects:  11% (1/9)       
20-May-2026 16:19:45 remote: Counting objects:  22% (2/9)       
20-May-2026 16:19:45 remote: Counting objects:  33% (3/9)       
20-May-2026 16:19:45 remote: Counting objects:  44% (4/9)       
20-May-2026 16:19:45 remote: Counting objects:  55% (5/9)       
20-May-2026 16:19:45 remote: Counting objects:  66% (6/9)       
20-May-2026 16:19:45 remote: Counting objects:  77% (7/9)       
20-May-2026 16:19:45 remote: Counting objects:  88% (8/9)       
20-May-2026 16:19:45 remote: Counting objects: 100% (9/9)       
20-May-2026 16:19:45 remote: Counting objects: 100% (9/9), done.       
20-May-2026 16:19:45 remote: Compressing objects:  20% (1/5)       
20-May-2026 16:19:45 remote: Compressing objects:  40% (2/5)       
20-May-2026 16:19:45 remote: Compressing objects:  60% (3/5)       
20-May-2026 16:19:45 remote: Compressing objects:  80% (4/5)       
20-May-2026 16:19:45 remote: Compressing objects: 100% (5/5)       
20-May-2026 16:19:45 remote: Compressing objects: 100% (5/5), done.       
20-May-2026 16:19:45 remote: Total 5 (delta 4), reused 0 (delta 0), pack-reused 0       
20-May-2026 16:19:45 From ssh://127.0.0.1:43903/pipe/pipeline
20-May-2026 16:19:45 * [new branch]          PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal -> PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
20-May-2026 16:19:45 /usr/bin/git log -1 --encoding=UTF-8 --format=%H 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:45 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:45 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:45 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:45 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:45 fatal: unable to write parameters to config file
20-May-2026 16:19:45 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:45 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:45 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:45 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:45 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:45 Warning: failed to checkout source code to directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674', trying to recover...
20-May-2026 16:19:45 Cleaned source directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:45 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:45 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:45 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:45 fatal: unable to write parameters to config file
20-May-2026 16:19:45 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:45 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:45 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:45 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:45 Failed to execute git operations on any configured Bitbucket instances. Proceeding with final failing...
20-May-2026 16:19:45 Updating source code to revision: 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:45 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:45 Fetching 'refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal' from 'ssh://git@open-bitbucket.nrao.edu:7999/pipe/pipeline.git'.
20-May-2026 16:19:45 /usr/bin/git fetch -f -p ssh://0390fb2d-ae1f-4cc5-a920-bc60b17ad72b@127.0.0.1:43903/pipe/pipeline.git +refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal:refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal --update-head-ok --progress --verbose
20-May-2026 16:19:45 Warning: Permanently added '[127.0.0.1]:43903' (RSA) to the list of known hosts.
20-May-2026 16:19:45 X11 forwarding request failed on channel 0
20-May-2026 16:19:45 From ssh://127.0.0.1:43903/pipe/pipeline
20-May-2026 16:19:45 = [up to date]          PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal -> PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
20-May-2026 16:19:45 /usr/bin/git log -1 --encoding=UTF-8 --format=%H 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:45 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:45 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:45 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:45 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:45 fatal: unable to write parameters to config file
20-May-2026 16:19:45 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:45 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:45 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:45 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:45 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:45 Warning: failed to checkout source code to directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674', trying to recover...
20-May-2026 16:19:45 Cleaned source directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:45 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:45 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:45 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:45 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:45 fatal: unable to write parameters to config file
20-May-2026 16:19:45 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:45 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:45 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:45 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:45 Failed to execute git operations on any configured Bitbucket instances. Proceeding with final failing...
20-May-2026 16:19:46 Updating source code to revision: 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:46 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:46 Fetching 'refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal' from 'ssh://git@open-bitbucket.nrao.edu:7999/pipe/pipeline.git'.
20-May-2026 16:19:46 /usr/bin/git fetch -f -p ssh://8606c575-2255-418d-9693-42e220eb05d2@127.0.0.1:43903/pipe/pipeline.git +refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal:refs/heads/PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal --update-head-ok --progress --verbose
20-May-2026 16:19:46 Warning: Permanently added '[127.0.0.1]:43903' (RSA) to the list of known hosts.
20-May-2026 16:19:46 X11 forwarding request failed on channel 0
20-May-2026 16:19:46 From ssh://127.0.0.1:43903/pipe/pipeline
20-May-2026 16:19:46 = [up to date]          PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal -> PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
20-May-2026 16:19:46 /usr/bin/git log -1 --encoding=UTF-8 --format=%H 9aa8f21df25a7564190c77409285e2ee6c8b9efa
20-May-2026 16:19:46 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:46 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:46 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:46 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:46 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:46 fatal: unable to write parameters to config file
20-May-2026 16:19:46 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:46 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:46 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:46 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:46 /usr/bin/git log -1 --encoding=UTF-8 --format=%H HEAD
20-May-2026 16:19:46 Warning: failed to checkout source code to directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674', trying to recover...
20-May-2026 16:19:46 Cleaned source directory '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:46 Checking out revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa.
20-May-2026 16:19:46 Creating local git repository in '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674/.git'.
20-May-2026 16:19:46 /usr/bin/git clone /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915 --shared --no-checkout '-c filter.lfs.smudge=' '-c filter.lfs.required=false' /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
20-May-2026 16:19:46 Cloning into '/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674'...
20-May-2026 16:19:46 error: invalid key:  filter.lfs.smudge
20-May-2026 16:19:46 fatal: unable to write parameters to config file
20-May-2026 16:19:46 Checkout to revision 9aa8f21df25a7564190c77409285e2ee6c8b9efa has failed.
20-May-2026 16:19:46 /usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915
20-May-2026 16:19:46 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:46 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:46 Failed to execute git operations on any configured Bitbucket instances. Proceeding with final failing...
20-May-2026 16:19:46 Error occurred while running Task '(1)' of type com.atlassian.bamboo.plugins.vcs:task.vcs.checkout.
20-May-2026 16:19:46 java.lang.RuntimeException: com.atlassian.bamboo.plugins.stash.repository.StashRepositoryException: Could not connect to Bitbucket
20-May-2026 16:19:46         at com.atlassian.bamboo.executor.RetryingTaskExecutor.rerun(RetryingTaskExecutor.java:142)
20-May-2026 16:19:46         at com.atlassian.bamboo.executor.RetryingTaskExecutor.runTask(RetryingTaskExecutor.java:99)
20-May-2026 16:19:46         at com.atlassian.bamboo.executor.RetryingTaskExecutor.retry(RetryingTaskExecutor.java:208)
20-May-2026 16:19:46         at com.atlassian.bamboo.executor.RetryingTaskExecutor.retry(RetryingTaskExecutor.java:189)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.execute(VcsCheckoutTask.java:130)
20-May-2026 16:19:46         at com.atlassian.bamboo.task.TaskExecutorImpl.lambda$executeTasks$3(TaskExecutorImpl.java:323)
20-May-2026 16:19:46         at com.atlassian.bamboo.task.TaskExecutorImpl.executeTaskWithPrePostActions(TaskExecutorImpl.java:258)
20-May-2026 16:19:46         at com.atlassian.bamboo.task.TaskExecutorImpl.executeTasks(TaskExecutorImpl.java:323)
20-May-2026 16:19:46         at com.atlassian.bamboo.task.TaskExecutorImpl.executePreparationTasks(TaskExecutorImpl.java:97)
20-May-2026 16:19:46         at com.atlassian.bamboo.build.pipeline.tasks.PrepareBuildTask.call(PrepareBuildTask.java:81)
20-May-2026 16:19:46         at com.atlassian.bamboo.v2.build.agent.DefaultBuildAgent.executeBuildPhase(DefaultBuildAgent.java:242)
20-May-2026 16:19:46         at com.atlassian.bamboo.v2.build.agent.DefaultBuildAgent.build(DefaultBuildAgent.java:214)
20-May-2026 16:19:46         at com.atlassian.bamboo.v2.build.agent.BuildAgentControllerImpl.lambda$waitAndPerformBuild$0(BuildAgentControllerImpl.java:183)
20-May-2026 16:19:46         at com.atlassian.bamboo.variable.CustomVariableContextImpl.withVariableSubstitutor(CustomVariableContextImpl.java:115)
20-May-2026 16:19:46         at com.atlassian.bamboo.v2.build.agent.BuildAgentControllerImpl.waitAndPerformBuild(BuildAgentControllerImpl.java:176)
20-May-2026 16:19:46         at com.atlassian.bamboo.v2.build.agent.DefaultBuildAgent.lambda$start$0(DefaultBuildAgent.java:159)
20-May-2026 16:19:46         at com.atlassian.bamboo.security.ImpersonationHelper.runWith(ImpersonationHelper.java:26)
20-May-2026 16:19:46         at com.atlassian.bamboo.security.ImpersonationHelper.runWithSystemAuthority(ImpersonationHelper.java:17)
20-May-2026 16:19:46         at com.atlassian.bamboo.security.ImpersonationHelper.lambda$makeRunnableWithSystemAuthority$0(ImpersonationHelper.java:38)
20-May-2026 16:19:46         at java.base/java.lang.Thread.run(Thread.java:840)
20-May-2026 16:19:46 Caused by: com.atlassian.bamboo.plugins.stash.repository.StashRepositoryException: Could not connect to Bitbucket
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.stash.v2.BitbucketServerWorkingCopyManager.lambda$retrieveSourceCode$4(BitbucketServerWorkingCopyManager.java:109)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.stash.v2.AbstractBitbucketServerExecutor.executeOnMirrorWithPrimaryFallback(AbstractBitbucketServerExecutor.java:61)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.stash.v2.BitbucketServerWorkingCopyManager.retrieveSourceCode(BitbucketServerWorkingCopyManager.java:103)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.fillWorkingDirFromVcs(VcsCheckoutTask.java:214)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.vcs.task.VcsCheckoutTask.lambda$execute$0(VcsCheckoutTask.java:131)
20-May-2026 16:19:46         at com.atlassian.bamboo.executor.RetryingTaskExecutor.rerun(RetryingTaskExecutor.java:112)
20-May-2026 16:19:46         ... 19 more
20-May-2026 16:19:46 Caused by: com.atlassian.bamboo.plugins.git.GitCommandException: command [/usr/bin/git remote set-url origin file:///opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache/0f87d47f932221ddde4439d2df095beaaa849915] failed with code 128. Working directory was [/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674]., stderr:
20-May-2026 16:19:46 fatal: not a git repository (or any parent up to mount point /opt)
20-May-2026 16:19:46 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCommandProcessor.runCommand(GitCommandProcessor.java:792)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCommandProcessor.runCommand(GitCommandProcessor.java:721)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCommandProcessor.runCommand(GitCommandProcessor.java:712)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCommandProcessor.setOrigin(GitCommandProcessor.java:606)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCommandProcessor.setOriginToLocalDirectory(GitCommandProcessor.java:663)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.NativeGitOperationHelper.checkout(NativeGitOperationHelper.java:509)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.lambda$checkout$1(GitWorkingCopyManager.java:262)
20-May-2026 16:19:46         at io.atlassian.util.concurrent.ManagedLocks$ManagedLockImpl.withLock(ManagedLocks.java:293)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.GitCacheDirectory$LoggingManagedLock.withLock(GitCacheDirectory.java:48)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.checkout(GitWorkingCopyManager.java:250)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.checkout(GitWorkingCopyManager.java:202)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.git.v2.GitWorkingCopyManager.retrieveSourceCode(GitWorkingCopyManager.java:122)
20-May-2026 16:19:46         at com.atlassian.bamboo.plugins.stash.v2.BitbucketServerWorkingCopyManager.lambda$retrieveSourceCode$4(BitbucketServerWorkingCopyManager.java:105)
20-May-2026 16:19:46         ... 24 more
20-May-2026 16:19:46 Failed to prepare the build 'PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal - Pipeline PR Test 6.7.4 #1 (PIPESPECS-PPRT589-PPRT674-1)'
20-May-2026 16:19:46
Substituting variable: ${bamboo.agentId} with 159678466
20-May-2026 16:19:46
Substituting variable: ${bamboo.agentId} with 159678466
20-May-2026 16:19:46
Substituting variable: ${bamboo.agentId} with 159678466
20-May-2026 16:19:46 Starting task 'Cleanup' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
20-May-2026 16:19:46
Beginning to execute external process for build 'PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal - Pipeline PR Test 6.7.4 #1 (PIPESPECS-PPRT589-PPRT674-1)'
... running command line:
/opt/ci_workspace/casa/bamboo/agent9/temp/PIPESPECS-PPRT589-PPRT674-1-ScriptBuildTask-7908146587247827225.sh
... in: /opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
bamboo_planRepository_1_branch=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_capability_buildmachinetype=dockertest
bamboo_planRepository_1_branchDisplayName=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_resultsUrl=https://open-bamboo.nrao.edu/browse/PIPESPECS-PPRT589-PPRT674-1
bamboo_build_working_directory=/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
bamboo_planRepository_1_name=Pipeline
bamboo_buildKey=PIPESPECS-PPRT589-PPRT674
bamboo_shortPlanName=Pipeline Pull Request Test
bamboo_capability_hostname=casaci-4
bamboo_planRepository_name=Pipeline
bamboo_buildNumber=1
bamboo_simpleBuildTimeStamp=20260520161943
bamboo_shortJobName=Pipeline PR Test 6.7.4
bamboo_buildResultsUrl=https://open-bamboo.nrao.edu/browse/PIPESPECS-PPRT589-PPRT674-1
bamboo_username=vsuorant@nrao.edu
bamboo_planRepository_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/pipe/pipeline.git
bamboo_ManualBuildTriggerReason_stageName=Default Stage
bamboo_agentId=159678466
bamboo_planName=PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_shortPlanKey=PPRT589
bamboo_repository_pr_key=1828
bamboo_build_commandline_com_atlassian_bamboo_plugins_scripttask_task_builder_script_8=/opt/ci_workspace/casa/bamboo/agent5/temp/PIPESPECS-PPRT589-PPRT674-1-ScriptBuildTask-7514399755083000811.sh
bamboo_al_password=********
bamboo_shortJobKey=PPRT674
bamboo_signature=3116870A355D5035B7A1486D75B5396BAFC8FADE
bamboo_planRepository_revision=9aa8f21df25a7564190c77409285e2ee6c8b9efa
bamboo_buildTimeStamp=2026-05-20T16:19:43.923-04:00
bamboo_repository_pr_targetBranch=main
bamboo_buildResultKey=PIPESPECS-PPRT589-PPRT674-1
bamboo_buildPlanName=PIPESPECS - Pipeline Pull Request Test - PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal - Pipeline PR Test 6.7.4
bamboo_planRepository_1_revision=9aa8f21df25a7564190c77409285e2ee6c8b9efa
bamboo_repository_pr_sourceBranch=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_buildFailed=false
bamboo_capability_system_docker_executable=/usr/bin/docker
bamboo_planRepository_branch=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_agentWorkingDirectory=/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir
bamboo_capability_system_git_executable=/usr/bin/git
bamboo_capability_system_jdk_JDK_17=/usr/lib/jvm/java-17-openjdk-17.0.19.0.10-2.el9.x86_64
bamboo_capability_system_jdk_JDK_17_0_19__JRE_=/usr/lib/jvm/java-17-openjdk-17.0.19.0.10-2.el9.x86_64
bamboo_planRepository_branchDisplayName=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_planRepository_1_type=bbserver
bamboo_planRepository_branchName=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_shortPlanBranchName=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
bamboo_capability_system_jdk_JDK=/usr/lib/jvm/java-17-openjdk-17.0.19.0.10-2.el9.x86_64
bamboo_plan_storageTag=plan-158925507
bamboo_planRepository_1_username=
bamboo_planRepository_type=bbserver
bamboo_git_cache_directory=/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/_git-repositories-cache
bamboo_ManualBuildTriggerReason_userName=vsuorant
bamboo_tmp_directory=/opt/ci_workspace/casa/bamboo/agent9/temp
bamboo_working_directory=/opt/ci_workspace/casa/bamboo/agent9/xml-data/build-dir/PIPESPECS-PPRT589-PPRT674
bamboo_planKey=PIPESPECS-PPRT589
bamboo_RerunBuildTriggerReason_noOfRetries=1
bamboo_planRepository_1_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/pipe/pipeline.git
bamboo_planRepository_username=
bamboo_triggerReason_key=com.atlassian.bamboo.plugin.system.triggerReason:RerunBuildTriggerReason
bamboo_planRepository_1_branchName=PIPE-3037-change-newly-flagged-qa-score-for-hif_applycal
20-May-2026 16:19:46 Starting cleanup
20-May-2026 16:19:46 Removed pipelinetest-159678466
20-May-2026 16:19:46 Finished task 'Cleanup' with result: Success
20-May-2026 16:19:46 Running on server: post build plugin 'Build Hanging Detection Configuration'
20-May-2026 16:19:46 Running on server: post build plugin 'NCover Results Collector'
20-May-2026 16:19:46 Running on server: post build plugin 'Build Labeller'
20-May-2026 16:19:46 Running on server: post build plugin 'Clover Delta Calculator'
20-May-2026 16:19:46 Running on server: post build plugin 'Maven Dependencies Postprocessor'
20-May-2026 16:19:46 All post build plugins have finished
20-May-2026 16:19:46 Generating build results summary...
20-May-2026 16:19:46 Saving build results to disk...
20-May-2026 16:19:46 Store variable context...
20-May-2026 16:19:46 Finished building PIPESPECS-PPRT589-PPRT674-1.

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