2025-02-18 17:47:59        INFO        FITSReader::showHDU +        TUNIT19 = 'DEG/DAY '
2025-02-18 17:47:59        INFO        FITSReader::showHDU +               
2025-02-18 17:47:59        INFO        FITSReader::showHDU +        END
2025-02-18 17:47:59        INFO        FITSReader::showBinaryTable         3 rows, 19 cols, 408 bytes total
2025-02-18 17:47:59        INFO        FITSReader::showBinaryTable         the first 20 cols of the first 5 rows:
2025-02-18 17:47:59        INFO        FITSReader::showBinaryTable         0: | 1 | 1331+30500002_0      | 0 |      | 0 | 0 | 0 | 0 | 0 | 1.5502e+06 | -157.215 | 30.5092 | 2000 | -157.263 | 30.5314 | 0 | 1.42041e+09 | 0 | 0 |
2025-02-18 17:47:59        INFO        FITSReader::showBinaryTable +        1: | 2 | 1445+09900002_0      | 0 |      | 0 | 0 | 0 | 0 | 0 | 1.5502e+06 | -138.681 | 9.97669 | 2000 | -138.732 | 9.99458 | 0 | 1.42041e+09 | 0 | 0 |
2025-02-18 17:47:59        INFO        FITSReader::showBinaryTable +        2: | 3 | N5921_2              | 0 |      | 0 | 0 | 0 | 0 | 0 | 1.5502e+06 | -129.5 | 5.06667 | 2000 | -129.552 | 5.08192 | 0 | 1.42041e+09 | 0 | 0 |
2025-02-18 17:47:59        INFO        FITSReader::listFits         <<<------ Binary Table HDU
2025-02-18 17:47:59        INFO        FITSReader::listFits         finish processing of Header-Data Units.
2025-02-18 17:47:59        INFO        MSFitsInput::MSFitsInput        Converting FITS file 'ngc5921.fits' to MeasurementSet 'fromfits.ms'
2025-02-18 17:47:59        INFO        MSFitsInput::setupMeasurementSet        Using tile shape [2, 63, 1040] for VLA with obstype=0
2025-02-18 17:47:59        INFO        MSFitsInput::fillMSMainTable        Reading and writing 22653 visibility groups
2025-02-18 17:47:59        INFO        MSFitsInput::readRandomGroupUVFits        extname=AIPS FQ  nrows=1 ncols=5 rowsize=24 pcount=0 gcount=1
2025-02-18 17:47:59        INFO        MSFitsInput::readRandomGroupUVFits        extname=AIPS AN  nrows=28 ncols=13 rowsize=66 pcount=0 gcount=1
2025-02-18 17:47:59        INFO        MSFitsInput::readRandomGroupUVFits        extname=AIPS SU  nrows=3 ncols=19 rowsize=136 pcount=0 gcount=1
2025-02-18 17:47:59        INFO        MSFitsInput::fillExtraTables        Filling SOURCE table (this may take some time).
2025-02-18 17:48:00        INFO        ms::tofits        By selection 22653 rows to be converted are reduced to 4509
2025-02-18 17:48:00        INFO        MSFitsOutput::write         nchan=63 startchan=0 stepchan=1 avgchan=1
2025-02-18 17:48:00        INFO        MSFitsOutput::write        Converting MeasurementSet /Users/casaci/bamboohome/xml-data/build-dir/CASASPECS-PR57-TTO14/casa6/casatestutils/nosedir/test_tool_ms/tab76328_1123 to FITS file 'testfile.fits'
2025-02-18 17:48:00        INFO        MSFitsOutput::_writeMain        Writing DATA column
2025-02-18 17:48:00        INFO        MSFitsOutput::_writeMain        Frequency reference frame is LSRK
2025-02-18 17:48:00        INFO        MSFitsOutput::write        Writing AIPS FQ table
2025-02-18 17:48:00        INFO        MSFitsOutput::writeFQ        Found 1 spectral windows
2025-02-18 17:48:00        INFO        MSFitsOutput::write        Writing AIPS AN table
2025-02-18 17:48:00        INFO        MSFitsOutput::writeAN        Using ITRF frame for antenna positions.
2025-02-18 17:48:00        INFO        MSFitsOutput::writeAN        Found 28 antennas in array #1
2025-02-18 17:48:01        INFO        MSFitsOutput::write         nchan=3 startchan=0 stepchan=1 avgchan=1
2025-02-18 17:48:01        INFO        MSFitsOutput::write        Converting MeasurementSet /opt/casa/data/casatestdata/unittest/mstool/uvfits_test.ms to FITS file 'xyz.uvfits'
2025-02-18 17:48:01        INFO        MSFitsOutput::_writeMain        CORRECTED_DATA does not exist, writing DATA
2025-02-18 17:48:01        INFO        MSFitsOutput::_writeMain        Frequency reference frame is LSRK
2025-02-18 17:48:01        INFO        MSFitsOutput::write        Writing AIPS FQ table
2025-02-18 17:48:01        INFO        MSFitsOutput::writeFQ        Found 2 spectral windows
2025-02-18 17:48:01        INFO        MSFitsOutput::write        Writing AIPS AN table
2025-02-18 17:48:01        INFO        MSFitsOutput::writeAN        Using ITRF frame for antenna positions.
2025-02-18 17:48:01        INFO        MSFitsOutput::writeAN        Found 8 antennas in array #1
2025-02-18 17:48:01        INFO        MSFitsInput::MSFitsInput        Converting FITS file 'xyz.uvfits' to MeasurementSet 'ke.ms'
2025-02-18 17:48:01        INFO        MSFitsInput::setupMeasurementSet        Using tile shape [1, 3, 43690] for SMA with obstype=0
2025-02-18 17:48:02        INFO        MSFitsInput::fillMSMainTableColWise        SOURCE not found in UU VV WW DATE DATE BASELINE FREQSEL
2025-02-18 17:48:02        INFO        MSFitsInput::fillMSMainTableColWise        Reading and writing 630 visibility groups
2025-02-18 17:48:02        INFO        MSFitsInput::readRandomGroupUVFits        extname=AIPS FQ  nrows=2 ncols=5 rowsize=24 pcount=0 gcount=1
2025-02-18 17:48:02        INFO        MSFitsInput::readRandomGroupUVFits        extname=AIPS AN  nrows=8 ncols=13 rowsize=66 pcount=0 gcount=1
2025-02-18 17:48:02        INFO        MSFitsInput::fillExtraTables        Filling SOURCE table (this may take some time).
2025-02-18 17:48:02        WARN        MSFitsInput::fillExtraTable        No systemic velocity for field 0
2025-02-18 17:48:02        WARN        MSFitsInput::fillExtraTable        No rest frequency for field 0
2025-02-18 17:48:02        WARN        MSFitsInput::fillExtraTable        No systemic velocity for field 0
2025-02-18 17:48:02        WARN        MSFitsInput::fillExtraTable        No rest frequency for field 0
2025-02-18 17:48:03        INFO        MSFitsInput::MSFitsInput        Converting FITS file '/opt/casa/data/casatestdata/unittest/mstool/1331+305_I.UVFITS' to MeasurementSet 'my.ms'
2025-02-18 17:48:03        SEVERE        ms::fromfits        Stokes I cannot be decomposed into proper correlation types without making assumptions. This functionality is not supported at File: ../../msfits/MSFits/MSFitsInput.cc, line: 747 at File: ../../msfits/MSFits/MSFitsInput.cc, line: 597
2025-02-18 17:48:13        INFO        NewMSSimulator::NewMSSimulator(MeasurementSet& theMS)         Opening MeasurementSet /Users/casaci/bamboohome/xml-data/build-dir/CASASPECS-PR57-TTO14/casa6/casatestutils/nosedir/test_tool_simulator/settrop_split_ant_spw_copy.ms with 15990 rows
2025-02-18 17:48:13        INFO        NewMSSimulator::NewMSSimulator(MeasurementSet& theMS)            last spectral window ID = 1
2025-02-18 17:48:14        INFO        Simulator::create_corrupt()         Creating TF Calibration structure for data corruption.
2025-02-18 17:48:14        INFO        SVC::sizeUpSim()         For simint = 0.1s, found 60 solution intervals.
2025-02-18 17:48:14        INFO        T::createCorruptor()          PWV fluctuations = 0.15 of mean PWV which is 3mm
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         Initializing ATM
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         altitude=5000m, Pground=560mb, Tground=270K, humidity= 20%, water scale height=2000m
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         Spectral window 230(ch 64/128)
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         After setting WH2O to 3
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         Dry and Wet Opacity from RefractiveIndexProfile = 0.0108571, 0.12934 at 230 GHz (ch64)
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         Dry and Wet Opacity from SkyStatus              = 0.0108571, 0.12934
2025-02-18 17:48:14        INFO        AtmCorr::initAtm         Sky plus ground and CMB Brightness Temp across Spw 0, for spill=0.85 Tground=270 pwv=3
2025-02-18 17:48:14        INFO        AtmCorr::initAtm          Zenith Tebb[229,230,230.984]=[73.1745,73.4238,74.3213]
2025-02-18 17:48:14        INFO        AtmCorr::init(Seed,Beta,Scale,AntCols)         creating new fBM of size 245,205 (may take a few minutes) ...
2025-02-18 17:48:14        INFO        SVC[Tf Jones]::setSimulate()         Calculating corruption terms for simulated Tf Jones: output table=settrop_table simint=0.1s t=0.1
2025-02-18 17:48:14        INFO        SVC[Tf Jones]::setSimulate()         Writing calTable = settrop_table (Tf Jones)
2025-02-18 17:48:14        INFO                Writing solutions to table: settrop_table
2025-02-18 17:48:14        INFO        Simulator::corrupt()         Doing visibility corruption.
2025-02-18 17:48:14        INFO        Simulator::corrupt()         simulated Tf Jones: output table=settrop_table simint=0.1s t=0spwok = [1] in corrupt mode.
2025-02-18 17:48:15        INFO        Simulator::reset()         Resetting all visibility corruption components
2025-02-18 17:48:15        INFO        Simulator::reset()         Reset all image-plane corruption components
2025-02-18 17:48:17        INFO        NewMSSimulator::initAnt()         Using global coordinates for the antennas
2025-02-18 17:48:17        INFO        NewMSSimulator::initAnt()         Added rows to ANTENNA table
2025-02-18 17:48:17        INFO        MSsimulator::initFeeds()         Added rows to FEED table
2025-02-18 17:48:17        INFO        MSsimulator::initSpWindows()         Creating new spectral window LBand, ID 1
2025-02-18 17:48:17        INFO        simulator::settimes()        Times
2025-02-18 17:48:17        INFO        simulator::settimes()+             Integration time 2000s
2025-02-18 17:48:17        INFO        simulator::settimes()             Times will be interpreted as hour angles for first source
2025-02-18 17:48:17        INFO        NewMSSimulator::observe()        First source: fake @ 19:53:50.00   +40.06.00.00       J2000
2025-02-18 17:48:17        INFO        NewMSSimulator::observe()+        Full time range: 03-Oct-2019/21:16:01.8 -- 04-Oct-2019/07:16:01.8 TAI with int = 2000
2025-02-18 17:48:17        INFO        NewMSSimulator::observe()        Calculating a total of 18 integrations
2025-02-18 17:48:17        INFO        Simulator::reset()         Resetting all visibility corruption components
2025-02-18 17:48:17        INFO        Simulator::reset()         Reset all image-plane corruption components
2025-02-18 17:48:17        INFO        AgentFlagger::open        Table type is Measurement Set
2025-02-18 17:48:17        INFO        AgentFlagger::initAgents        There are initially 1 agents in the list. Agents: unflag
2025-02-18 17:48:17        INFO        AgentFlagger::initAgents        There are 1 valid agents in the list. Agents: unflag
2025-02-18 17:48:17        INFO        FlagMSHandler::        Chunk = 1 [progress: 100%], Observation = 0, Array = 0, Scan = 1, Field = 0 (fake), Spw = 0, Channels = 5, Corrs = [ RR LL ], Total Rows = 6318
2025-02-18 17:48:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (63180/63180)
2025-02-18 17:48:17        INFO        FlagMSHandler::nextChunk         ====================================================================================
2025-02-18 17:48:17        INFO        Unflag::tableSummary        => Percentage of data un-flagged in table selection: 100%
2025-02-18 17:48:17        INFO        AgentFlagger::run        => Writing flags to the MS
2025-02-18 17:48:17        INFO        NewMSSimulator::NewMSSimulator(MeasurementSet& theMS)         Opening MeasurementSet /Users/casaci/bamboohome/xml-data/build-dir/CASASPECS-PR57-TTO14/casa6/casatestutils/nosedir/test_tool_simulator/myms.ms with 6318 rows
2025-02-18 17:48:17        INFO        NewMSSimulator::NewMSSimulator(MeasurementSet& theMS)            last spectral window ID = 1
2025-02-18 17:48:17        INFO        Simulator::predict()         Predicting visibilities using model: [] and componentList: mycomplist.cl
2025-02-18 17:48:17        INFO        Simulator::predict()         The data column will be replaced
2025-02-18 17:48:17        INFO        Simulator::getVPRecord         Using default Voltage Patterns from the VPManager
2025-02-18 17:48:17        INFO        Simulator::getVPRecord         Temporary alert : The state of the vpmanager tool has been modified by loading these primary beam models. If any of your scripts rely on the vpmanager state being preserved throughout your CASA session, please use vp.saveastable() and vp.loadfromtable() as needed.
2025-02-18 17:48:17        INFO        Simulator::createSkyEquation()         Synthesis gridding
2025-02-18 17:48:17        INFO        Simulator::createSkyEquation()         Fourier transforms will use image centers as tangent points
2025-02-18 17:48:17        INFO        Simulator::reset()         Resetting all visibility corruption components
2025-02-18 17:48:17        INFO        Simulator::reset()         Reset all image-plane corruption components
Cloning into 'casa-build-utils'...
/Library/Developer/CommandLineTools/usr/bin/python3: No module named twine