Build: #47 failed

Job: OSX10.15 failed

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Build log

The build generated 463 lines of output. Download or view full build log.

11-Feb-2020 16:03:25 Build CASA - Casa 6 Master Package - OSX10.15 #47 (CASA-C6MP-OSX1015-47) started building on agent cbt-osx1015-bld-c6.cv.nrao.edu
11-Feb-2020 16:03:25 Remote agent on host cbt-osx1015-bld-c6.cv.nrao.edu
11-Feb-2020 16:03:25 Build working directory is /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015
11-Feb-2020 16:03:26 Executing build CASA - Casa 6 Master Package - OSX10.15 #47 (CASA-C6MP-OSX1015-47)
11-Feb-2020 16:03:26 Starting task 'Clean working directory task' of type 'com.atlassian.bamboo.plugins.bamboo-artifact-downloader-plugin:cleanWorkingDirectoryTask'
11-Feb-2020 16:03:26 Cleaning working directory '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015'
11-Feb-2020 16:03:26 Finished task 'Clean working directory task' with result: Success
11-Feb-2020 16:03:26 Running pre-build action: VCS Version Collector
11-Feb-2020 16:03:26
Substituting variable: ${bamboo.repository.branch.name} with master
11-Feb-2020 16:03:26
Substituting variable: ${bamboo.agentWorkingDirectory} with /Users/casaci/bamboohome/xml-data/build-dir
11-Feb-2020 16:03:26
Substituting variable: ${bamboo.agentWorkingDirectory} with /Users/casaci/bamboohome/xml-data/build-dir
11-Feb-2020 16:03:26 Starting task 'Build Tools wheel' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
11-Feb-2020 16:03:26
Beginning to execute external process for build 'CASA - Casa 6 Master Package - OSX10.15 #47 (CASA-C6MP-OSX1015-47)'
... running command line:
/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-47-ScriptBuildTask-1447815079818472791.sh
... in: /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015
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11-Feb-2020 16:03:26 Set cache size limit to 50.0 GB
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11-Feb-2020 16:04:10 Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
11-Feb-2020 16:04:10 Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
11-Feb-2020 16:04:10 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/casacore'...
11-Feb-2020 16:04:41 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source'...
11-Feb-2020 16:05:34 Submodule path 'casatools/casacore': checked out '87ff9dafbd637da80cc116a51282bdfc704f11f0'
11-Feb-2020 16:05:39 Submodule path 'casatools/grpc-source': checked out 'cca868ac8f3641df4003a82b7fc54c921e14f765'
11-Feb-2020 16:05:39 Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
11-Feb-2020 16:05:39 Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
11-Feb-2020 16:05:39 Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
11-Feb-2020 16:05:40 Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
11-Feb-2020 16:05:40 Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
11-Feb-2020 16:05:40 Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
11-Feb-2020 16:05:40 Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
11-Feb-2020 16:05:40 Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
11-Feb-2020 16:05:40 Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
11-Feb-2020 16:05:40 Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
11-Feb-2020 16:05:40 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/abseil-cpp'...
11-Feb-2020 16:05:41 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/benchmark'...
11-Feb-2020 16:05:42 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty'...
11-Feb-2020 16:05:43 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/boringssl'...
11-Feb-2020 16:06:05 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
11-Feb-2020 16:06:26 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/cares/cares'...
11-Feb-2020 16:06:28 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/gflags'...
11-Feb-2020 16:06:28 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/googletest'...
11-Feb-2020 16:06:30 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/protobuf'...
11-Feb-2020 16:06:38 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/zlib'...
11-Feb-2020 16:06:39 Submodule path 'casatools/grpc-source/third_party/abseil-cpp': checked out 'cc4bed2d74f7c8717e31f9579214ab52a9c9c610'
11-Feb-2020 16:06:39 Submodule path 'casatools/grpc-source/third_party/benchmark': checked out '5b7683f49e1e9223cf9927b24f6fd3d6bd82e3f8'
11-Feb-2020 16:06:40 Submodule path 'casatools/grpc-source/third_party/bloaty': checked out '73594cde8c9a52a102c4341c244c833aa61b9c06'
11-Feb-2020 16:06:40 Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
11-Feb-2020 16:06:40 Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
11-Feb-2020 16:06:40 Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
11-Feb-2020 16:06:40 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
11-Feb-2020 16:06:41 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
11-Feb-2020 16:06:42 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
11-Feb-2020 16:06:43 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/googletest': checked out 'a2b8a8e07628e5fd60644b6dd99c1b5e7d7f1f47'
11-Feb-2020 16:06:43 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer': checked out '1b543d6e5073b56be214394890c9193979a3d7e1'
11-Feb-2020 16:06:43 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/re2': checked out 'c964d9b07816f9b52ca692e23b8b3dba33beec54'
11-Feb-2020 16:06:44 Submodule path 'casatools/grpc-source/third_party/boringssl': checked out 'be2ee342d3781ddb954f91f8a7e660c6f59e87e5'
11-Feb-2020 16:06:45 Submodule path 'casatools/grpc-source/third_party/boringssl-with-bazel': checked out '886e7d75368e3f4fab3f4d0d3584e4abfc557755'
11-Feb-2020 16:06:46 Submodule path 'casatools/grpc-source/third_party/cares/cares': checked out '3be1924221e1326df520f8498d704a5c4c8d0cce'
11-Feb-2020 16:06:46 Submodule path 'casatools/grpc-source/third_party/gflags': checked out '30dbc81fb5ffdc98ea9b14b1918bfe4e8779b26e'
11-Feb-2020 16:06:46 Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
11-Feb-2020 16:06:46 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/gflags/doc'...
11-Feb-2020 16:06:47 Submodule path 'casatools/grpc-source/third_party/gflags/doc': checked out '971dd2a4fadac9cdab174c523c22df79efd63aa5'
11-Feb-2020 16:06:47 Submodule path 'casatools/grpc-source/third_party/googletest': checked out 'ec44c6c1675c25b9827aacd08c02433cccde7780'
11-Feb-2020 16:06:48 Submodule path 'casatools/grpc-source/third_party/protobuf': checked out '2761122b810fe8861004ae785cc3ab39f384d342'
11-Feb-2020 16:06:48 Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
11-Feb-2020 16:06:48 Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
11-Feb-2020 16:06:49 Submodule path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark': checked out '360e66c1c4777c99402cf8cd535aa510fee16573'
11-Feb-2020 16:06:49 Submodule path 'casatools/grpc-source/third_party/zlib': checked out 'cacf7f1d4e3d44d871b605da3b647f07d718623f'
11-Feb-2020 16:06:49 found java version 1.8
11-Feb-2020 16:06:50 configuring CASAtools... this may take a little while...
11-Feb-2020 16:07:45 configure: host os is darwin
11-Feb-2020 16:07:45 checking whether the C++ compiler works... yes
11-Feb-2020 16:07:45 checking for C++ compiler default output file name... a.out
11-Feb-2020 16:07:45 checking for suffix of executables...
11-Feb-2020 16:07:45 checking whether we are cross compiling... no
11-Feb-2020 16:07:45 checking for suffix of object files... o
11-Feb-2020 16:07:45 checking whether we are using the GNU C++ compiler... yes
11-Feb-2020 16:07:45 checking whether /usr/bin/c++ accepts -g... yes
11-Feb-2020 16:07:46 checking for OpenMP flag of C++ compiler... unknown
11-Feb-2020 16:07:46 checking for OpenMP flag of C++ compiler... (cached) unknown
11-Feb-2020 16:07:46 configure: C++11 compiler /usr/bin/c++
11-Feb-2020 16:07:46 checking for std::defaultfloat... yes
11-Feb-2020 16:07:46 checking whether C++ compiler accepts -fcx-fortran-rules... no
11-Feb-2020 16:07:46 checking for flags to support C++11 libc++... no
11-Feb-2020 16:07:46 configure: c++ compiler is /usr/bin/c++
11-Feb-2020 16:07:46 configure:  temporary directory /tmp/casatools-config-90658
11-Feb-2020 16:07:46 configure: creating /tmp/casatools-config-90658
11-Feb-2020 16:07:47 checking whether we are using the GNU C compiler... yes
11-Feb-2020 16:07:47 checking whether /usr/bin/cc accepts -g... yes
11-Feb-2020 16:07:47 checking for /usr/bin/cc option to accept ISO C89... none needed
11-Feb-2020 16:07:47 configure: C compiler /usr/bin/cc
11-Feb-2020 16:07:47 checking whether C compiler accepts -fcx-fortran-rules... no
11-Feb-2020 16:07:47 checking for gfortran-mp-5... no
11-Feb-2020 16:07:47 checking for gfortran-mp-4.9... no
11-Feb-2020 16:07:47 checking for gfortran-mp-4.8... no
11-Feb-2020 16:07:47 checking for gfortran... no
11-Feb-2020 16:07:47 checking whether we are using the GNU Fortran compiler... no
11-Feb-2020 16:07:47 checking whether  accepts -g... no
11-Feb-2020 16:07:47 checking for gfortran-mp-5... gfortran-mp-5
11-Feb-2020 16:07:47 checking whether we are using the GNU Fortran compiler... (cached) no
11-Feb-2020 16:07:47 checking whether gfortran-mp-5 accepts -g... (cached) no
11-Feb-2020 16:07:47 configure: Fortran compiler /opt/casa/03/bin/gfortran-mp-5
11-Feb-2020 16:07:47 checking for ccache... /opt/casa/03/bin/ccache
11-Feb-2020 16:07:47 checking for pread... yes
11-Feb-2020 16:07:48 checking for pwrite... yes
11-Feb-2020 16:07:48 checking for boostlib >= 1.41... yes
11-Feb-2020 16:07:48 checking for python... /opt/casa/03/bin/python
11-Feb-2020 16:07:48 checking for a version of Python >= '2.1.0'... yes
11-Feb-2020 16:07:48 checking for a version of Python >= '2.7.0'... yes
11-Feb-2020 16:07:48 checking for the distutils Python package... yes
11-Feb-2020 16:07:48 checking for Python include path... /opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/include/python3.6m
11-Feb-2020 16:07:48 checking for Python library path...
11-Feb-2020 16:07:48 checking for Python site-packages path... /opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages
11-Feb-2020 16:07:48 checking python extra libraries...  -ldl  -framework CoreFoundation
11-Feb-2020 16:07:48 checking python extra linking flags... -L/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/config-3.6m-darwin -lpython3.6m -ldl -framework CoreFoundation
11-Feb-2020 16:07:48 checking consistency of all components of python development environment... yes
11-Feb-2020 16:07:48 checking for python... /opt/casa/03/bin/python
11-Feb-2020 16:07:48 checking for numpy includedir... /opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/numpy/core/include
11-Feb-2020 16:07:49 checking whether linking to numpy library works... yes
11-Feb-2020 16:07:49 checking for readline in -lreadline... yes
11-Feb-2020 16:07:49 checking for flex... flex
11-Feb-2020 16:07:49 checking lex output file root... lex.yy
11-Feb-2020 16:07:49 checking lex library... none needed
11-Feb-2020 16:07:49 checking whether yytext is a pointer... no
11-Feb-2020 16:07:49 checking for bison... bison -y
11-Feb-2020 16:07:49 checking if compiler needs -Werror to reject unknown flags... yes
11-Feb-2020 16:07:49 checking whether pthreads work with -pthread... yes
11-Feb-2020 16:07:49 checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
11-Feb-2020 16:07:49 checking if more special flags are required for pthreads... -D_THREAD_SAFE
11-Feb-2020 16:07:49 checking for PTHREAD_PRIO_INHERIT... yes
11-Feb-2020 16:07:49 checking for pkg-config... /opt/casa/03/bin/pkg-config
11-Feb-2020 16:07:49 checking pkg-config is at least version 0.9.0... yes
11-Feb-2020 16:07:50 checking how to run the C++ preprocessor... /usr/bin/c++ -E
11-Feb-2020 16:07:50 checking for grep that handles long lines and -e... /usr/bin/grep
11-Feb-2020 16:07:50 checking for egrep... /usr/bin/grep -E
11-Feb-2020 16:07:50 checking for ANSI C header files... yes
11-Feb-2020 16:07:50 checking for sys/types.h... yes
11-Feb-2020 16:07:50 checking for sys/stat.h... yes
11-Feb-2020 16:07:50 checking for stdlib.h... yes
11-Feb-2020 16:07:50 checking for string.h... yes
11-Feb-2020 16:07:50 checking for memory.h... yes
11-Feb-2020 16:07:50 checking for strings.h... yes
11-Feb-2020 16:07:50 checking for inttypes.h... yes
11-Feb-2020 16:07:51 checking for stdint.h... yes
11-Feb-2020 16:07:51 checking for unistd.h... yes
11-Feb-2020 16:07:51 checking for CFITSIO... yes
11-Feb-2020 16:07:51 checking for WCSLIB... yes
11-Feb-2020 16:07:51 checking for rpfitsin_ in -lrpfits... no
11-Feb-2020 16:07:51 checking for rpfitsin_ in -lrpfits... yes
11-Feb-2020 16:07:51 checking for gsl-config... /opt/casa/03/bin/gsl-config
11-Feb-2020 16:07:51 checking requested gsl version (2.0)... yes
11-Feb-2020 16:07:51 checking for swig... /opt/casa/03/bin/swig
11-Feb-2020 16:07:51 checking swig version... 3.0.12
11-Feb-2020 16:07:51 checking requested swig version (3.0.0)... yes
11-Feb-2020 16:07:51 checking for libxml2 library... checking for xml2-config... /opt/casa/03/bin/xml2-config
11-Feb-2020 16:07:51 yes
11-Feb-2020 16:07:51 checking for EIGEN... yes
11-Feb-2020 16:07:51 configure: removing /tmp/casatools-config-90658
11-Feb-2020 16:07:51 configure: creating ./config.status
11-Feb-2020 16:07:51 config.status: creating build.properties
11-Feb-2020 16:07:51 config.status: creating setup.py
11-Feb-2020 16:08:14 casacore/casa/Json/JsonGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/casa/Json/JsonGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/casa/Json/JsonGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/images/Images/ImageExprGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/images/Images/ImageExprGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/images/Images/ImageExprGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSAntennaGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSAntennaGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSAntennaGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSArrayGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSArrayGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSArrayGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSCorrGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSCorrGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSCorrGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFeedGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFeedGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFeedGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFieldGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFieldGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSFieldGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSObservationGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSObservationGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSObservationGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSScanGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSScanGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSScanGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSSpwGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSSpwGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSSpwGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSStateGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSStateGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSStateGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSTimeGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSTimeGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSTimeGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSUvDistGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSUvDistGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/ms/MSSel/MSUvDistGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/tables/TaQL/RecordGram.yy:39.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    39 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/tables/TaQL/RecordGram.yy:39.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    39 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/tables/TaQL/RecordGram.yy:41.1-7: warning: POSIX Yacc does not support %expect [-Wyacc]
11-Feb-2020 16:08:14    41 | %expect 1                   /* do not report 1 shift/reduce conflict */
11-Feb-2020 16:08:14 casacore/tables/TaQL/RecordGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casacore/tables/TaQL/TableGram.yy:35.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casacore/tables/TaQL/TableGram.yy:35.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    35 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casacore/tables/TaQL/TableGram.yy:43.1-7: warning: POSIX Yacc does not support %expect [-Wyacc]
11-Feb-2020 16:08:14    43 | %expect 2
11-Feb-2020 16:08:14 casacore/tables/TaQL/TableGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 casa-source/code/synthesis/CalLibrary/CalLibraryGram.yy:34.1-12: warning: POSIX Yacc does not support %pure-parser [-Wyacc]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14 casa-source/code/synthesis/CalLibrary/CalLibraryGram.yy:34.1-12: warning: deprecated directive: ?%pure-parser?, use ?%define api.pure? [-Wdeprecated]
11-Feb-2020 16:08:14    34 | %pure-parser                /* make parser re-entrant */
11-Feb-2020 16:08:14       | %define api.pure
11-Feb-2020 16:08:14 casa-source/code/synthesis/CalLibrary/CalLibraryGram.yy: warning: 8 shift/reduce conflicts [-Wconflicts-sr]
11-Feb-2020 16:08:14 casa-source/code/synthesis/CalLibrary/CalLibraryGram.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
11-Feb-2020 16:08:14 _debug_build_: False
11-Feb-2020 16:08:14 Using /opt/casa/03 for third party libraries
11-Feb-2020 16:08:14 6.1.0.49 6.1.0.49
11-Feb-2020 16:08:14
11-Feb-2020 16:08:14 6.1.0.49
11-Feb-2020 16:08:14 6.1.0.49
11-Feb-2020 16:08:14 6 1 0 49   
11-Feb-2020 16:08:14 6.1.0.49
11-Feb-2020 16:08:14 generating version header...
11-Feb-2020 16:08:14 <inc> coordsys, image, synthesisimstore, componentlist, msmetadata, table
11-Feb-2020 16:08:14 <tgt> libmsmetadata < msmetadata
11-Feb-2020 16:08:14 <tgt> libtable < table
11-Feb-2020 16:08:14 <tgt> libcomponentlistcoordsysimage < componentlist coordsys image
11-Feb-2020 16:08:14 <tgt> libsynthesisimstore < synthesisimstore
11-Feb-2020 16:08:14 <tgt> synthesismaskhandler : synthesismaskhandler
11-Feb-2020 16:08:14 <tgt> utils : utils
11-Feb-2020 16:08:14 <tgt> miriadfiller : miriadfiller
11-Feb-2020 16:08:14 <tgt> coordsys : libcomponentlistcoordsysimage
11-Feb-2020 16:08:14 <tgt> mstransformer : mstransformer
11-Feb-2020 16:08:14 <tgt> vpmanager : vpmanager
11-Feb-2020 16:08:14 <tgt> image : libcomponentlistcoordsysimage
11-Feb-2020 16:08:14 <tgt> measures : measures
11-Feb-2020 16:08:14 <tgt> sakura : sakura
11-Feb-2020 16:08:14 <tgt> atmosphere : atmosphere
11-Feb-2020 16:08:14 <tgt> quanta : quanta
11-Feb-2020 16:08:14 <tgt> vlafiller : vlafiller
11-Feb-2020 16:08:14 <tgt> synthesisdeconvolver : synthesisdeconvolver
11-Feb-2020 16:08:14 <tgt> synthesisimstore : libsynthesisimstore
11-Feb-2020 16:08:14 <tgt> synthesisnormalizer : libsynthesisimstore synthesisnormalizer
11-Feb-2020 16:08:14 <tgt> regionmanager : regionmanager
11-Feb-2020 16:08:14 <tgt> calanalysis : calanalysis
11-Feb-2020 16:08:14 <tgt> iterbotsink : iterbotsink
11-Feb-2020 16:08:14 <tgt> singledishms : singledishms
11-Feb-2020 16:08:14 <tgt> synthesisimager : libsynthesisimstore synthesisimager
11-Feb-2020 16:08:14 <tgt> imager : imager
11-Feb-2020 16:08:14 <tgt> simulator : simulator
11-Feb-2020 16:08:14 <tgt> componentlist : libcomponentlistcoordsysimage
11-Feb-2020 16:08:14 <tgt> spectralline : spectralline
11-Feb-2020 16:08:14 <tgt> msmetadata : libmsmetadata
11-Feb-2020 16:08:14 <tgt> imagepol : imagepol libcomponentlistcoordsysimage
11-Feb-2020 16:08:14 <tgt> agentflagger : agentflagger
11-Feb-2020 16:08:14 <tgt> sdm : sdm
11-Feb-2020 16:08:14 <tgt> atcafiller : atcafiller
11-Feb-2020 16:08:14 <tgt> imagemetadata : imagemetadata
11-Feb-2020 16:08:14 <tgt> calibrater : calibrater
11-Feb-2020 16:08:14 <tgt> logsink : logsink
11-Feb-2020 16:08:14 <tgt> functional : functional
11-Feb-2020 16:08:14 <tgt> ms : libmsmetadata libtable ms
11-Feb-2020 16:08:14 <tgt> synthesisutils : libsynthesisimstore synthesisutils
11-Feb-2020 16:08:14 <tgt> table : libtable
11-Feb-2020 16:08:14
11-Feb-2020 16:08:14 Casacore version 3.1.2
11-Feb-2020 16:08:14 copying the grpc source directory...
11-Feb-2020 16:08:14         ]=> ['rsync', '-aq', 'grpc-source/', 'build/grpc.macosx-10.15-x86_64-3.6'] (cwd: /Volumes/DATA/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools)
11-Feb-2020 16:08:14
11-Feb-2020 16:08:14 Xcode version: Xcode 11.3
11-Feb-2020 16:08:14
11-Feb-2020 16:08:14 Traceback (most recent call last):
11-Feb-2020 16:08:14   File "./setup.py", line 2369, in <module>
11-Feb-2020 16:08:14     os.path.join('build', distutils_dir_name('grpc-install')) )
11-Feb-2020 16:08:14   File "./setup.py", line 680, in build_grpc
11-Feb-2020 16:08:14     xcodeversionmajor, xcodeversionminor, xcodeversionpatch = xcodeversion.split(".")
11-Feb-2020 16:08:14 ValueError: not enough values to unpack (expected 3, got 2)
11-Feb-2020 16:08:14 Finished task 'Build Tools wheel' with result: Success
11-Feb-2020 16:08:14
Substituting variable: ${bamboo.repository.branch.name} with master
11-Feb-2020 16:08:14
Substituting variable: ${bamboo.agentWorkingDirectory} with /Users/casaci/bamboohome/xml-data/build-dir
11-Feb-2020 16:08:14
Substituting variable: ${bamboo.agentWorkingDirectory} with /Users/casaci/bamboohome/xml-data/build-dir
11-Feb-2020 16:08:14 Starting task 'Build Tasks wheel' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
11-Feb-2020 16:08:14
Beginning to execute external process for build 'CASA - Casa 6 Master Package - OSX10.15 #47 (CASA-C6MP-OSX1015-47)'
... running command line:
/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-47-ScriptBuildTask-4254177295222500616.sh
... in: /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015
... using extra environment variables:
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11-Feb-2020 16:08:14 Set cache size limit to 50.0 GB
11-Feb-2020 16:08:14 Building task wheel
11-Feb-2020 16:08:14 Failing task since return code of [/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-47-ScriptBuildTask-4254177295222500616.sh] was 1 while expected 0
11-Feb-2020 16:08:14 Finished task 'Build Tasks wheel' with result: Failed
11-Feb-2020 16:08:14 Running post build plugin 'Docker Container Cleanup'
11-Feb-2020 16:08:14 Running post build plugin 'NCover Results Collector'
11-Feb-2020 16:08:14 Running post build plugin 'Clover Results Collector'
11-Feb-2020 16:08:14 Running post build plugin 'npm Cache Cleanup'
11-Feb-2020 16:08:14 Running post build plugin 'Artifact Copier'
11-Feb-2020 16:08:14 Publishing an artifact: OSX10.15  tools wheel
11-Feb-2020 16:08:14 Unable to publish artifact [OSX10.15  tools wheel]: the source directory /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/dist does not exist.
11-Feb-2020 16:08:14 The artifact is required, build will now fail.
11-Feb-2020 16:08:14 The artifact hasn't been successfully published after 2.242 ms
11-Feb-2020 16:08:14 Publishing an artifact: OSX10.15 tasks wheel
11-Feb-2020 16:08:14 Unable to publish artifact [OSX10.15 tasks wheel]: the source directory /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatasks/dist does not exist.
11-Feb-2020 16:08:14 The artifact hasn't been successfully published after 291.5 ?s
11-Feb-2020 16:08:14 Publishing an artifact: OSX10.15 shell wheel
11-Feb-2020 16:08:14 Unable to publish artifact [OSX10.15 shell wheel]: the source directory /Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casashell/dist does not exist.
11-Feb-2020 16:08:14 The artifact hasn't been successfully published after 438.6 ?s
11-Feb-2020 16:08:14 Finalising the build...
11-Feb-2020 16:08:14 Stopping timer.
11-Feb-2020 16:08:14 Build CASA-C6MP-OSX1015-47 completed.
11-Feb-2020 16:08:15 Running on server: post build plugin 'NCover Results Collector'
11-Feb-2020 16:08:15 Running on server: post build plugin 'Build Hanging Detection Configuration'
11-Feb-2020 16:08:15 Running on server: post build plugin 'Clover Delta Calculator'
11-Feb-2020 16:08:15 Running on server: post build plugin 'Maven Dependencies Postprocessor'
11-Feb-2020 16:08:15 All post build plugins have finished
11-Feb-2020 16:08:15 Generating build results summary...
11-Feb-2020 16:08:15 Saving build results to disk...
11-Feb-2020 16:08:15 Logging substituted variables...
11-Feb-2020 16:08:15 Indexing build results...
11-Feb-2020 16:08:15 Finished building CASA-C6MP-OSX1015-47.