Hendrik Muller Yesterday b1364209b14c59988f2bbeb0a20cdaca9d7f26a7

Pull request #1071: CAS-14778
Merge in CASA/casa6 from CAS-14778 to master

* commit '0d731f5701553c3bcd07344a0be600f6ec4afee4':
  CAS-14778 : Fix rectangular image case
  rename to cameltype and assert that dimensions are either both even or both odd
  Add test
  Copy the solution for odd pixels that was found for Matrix Cleaner over to also apply to MultiTermMatrixCleaner.cc Validated on Cygnus A, scales=[0,1], nterms=1, cellsize = 1.6 arcsec (such that the bright termination lobes correspond to just a few pixels transversely, in this way we can test the effect of the code change without simply looking at the effects of extended emission)
  Solved the problem for an odd number of pixels for Asp-CLEAN and MS-CLEAN. That is simply done by moving the slice for the beam subtraction up by one pixel. The problem does not exist for Hogbom. TBD: Verify that these fixes also fix the spectral versions and multiterm versions of the deconvolvers.

Hendrik Muller 2 days ago 0d731f5701553c3bcd07344a0be600f6ec4afee4 m

Merge master into CAS-14778 and solve conflicts

Srikrishna Sekhar 06 Aug 2026 d03371710fc33be7f53d288c28b57661ecab1afd m

CAS-14778 : Fix rectangular image case
Specifically, allow one axis to be odd and the other even. Previously
this was trapped as an exception, but this is explicitly a use-case that
tclean supports.

• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.cc (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.h (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.cc (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.h (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.cc (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.h (version d03371710fc33be7f53d288c28b57661ecab1afd) (diffs)

Hendrik Muller <hmuller@smurf.aoc.nrao.edu> 14 Jul 2026 a23393d10e4d61b542ce4f503b84139fcf2b79c1 m

rename to cameltype and assert that dimensions are either both even or both odd

• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.cc (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.h (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.cc (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.h (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.cc (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.h (version a23393d10e4d61b542ce4f503b84139fcf2b79c1) (diffs)

Hendrik Muller <hmuller@smurf.aoc.nrao.edu> 14 Jul 2026 1e86847f0d14c829305b9799311670e7888e2d85 m

Merge branch 'master' into CAS-14778

Hendrik Muller <hmuller@smurf.aoc.nrao.edu> 23 Jun 2026 5bf775ed1b2dbd34144612bdef51ffb0a450e3fa m

Add test

• casatasks/tests/tasks/test_task_tclean.py (version 5bf775ed1b2dbd34144612bdef51ffb0a450e3fa) (diffs)

Hendrik Muller <hmuller@smurf.aoc.nrao.edu> 11 Jun 2026 70e53e2ea400c1595e0086e5677cbc1ea9c2b8d6 m

Copy the solution for odd pixels that was found for Matrix Cleaner over to also apply to MultiTermMatrixCleaner.cc Validated on Cygnus A, scales=[0,1], nterms=1, cellsize = 1.6 arcsec (such that the bright termination lobes correspond to just a few pixels transversely, in this way we can test the effect of the code change without simply looking at the effects of extended emission)

• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.cc (version 70e53e2ea400c1595e0086e5677cbc1ea9c2b8d6) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MultiTermMatrixCleaner.h (version 70e53e2ea400c1595e0086e5677cbc1ea9c2b8d6) (diffs)

Hendrik Muller <hmuller@smurf.aoc.nrao.edu> 02 Jun 2026 9cd9a1feb47b028733de48ebc515e17005e9a805 m

Solved the problem for an odd number of pixels for Asp-CLEAN and MS-CLEAN. That is simply done by moving the slice for the beam subtraction up by one pixel. The problem does not exist for Hogbom. TBD: Verify that these fixes also fix the spectral versions and multiterm versions of the deconvolvers.

• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.cc (version 9cd9a1feb47b028733de48ebc515e17005e9a805) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/AspMatrixCleaner.h (version 9cd9a1feb47b028733de48ebc515e17005e9a805) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.cc (version 9cd9a1feb47b028733de48ebc515e17005e9a805) (diffs)
• casatools/src/code/synthesis/MeasurementEquations/MatrixCleaner.h (version 9cd9a1feb47b028733de48ebc515e17005e9a805) (diffs)

Rui Xue 2 days ago 64967c159b1d1a0822c427f5debfc852ba8d8775

Pull request #1934: PIPE-2738 improve docs for MAIN part2
Merge in PIPE/pipeline from PIPE-2738-improve-docs-for-MAIN-part2 to main

* commit 'd95f88f211e69f9622ec4088aabf9f8e72aa0c39':
  PIPE-2738: Modernize GitHub Pages deployment with official GitHub actions
  PIPE-2738: Fix pixi task parsing: reorder inline tasks before subsections
  PIPE-2738: disable auto-parentheses and use tilde trick for CLI task links
  PIPE-2738: Add some missed words back to `hif_applycal`

Rui Xue 2 days ago d95f88f211e69f9622ec4088aabf9f8e72aa0c39

PIPE-2738: Modernize GitHub Pages deployment with official GitHub actions
Replace third-party `peaceiris/actions-gh-pages` with official
`actions/upload-pages-artifact` and `actions/deploy-pages`. Update permissions
to use pages:write + id-token:write and add deployment environment tracking.
Eliminates automatic gh-pages branch creation.

• .github/workflows/build-gh-pages-pixi.yml (version d95f88f211e69f9622ec4088aabf9f8e72aa0c39) (diffs)

Rui Xue 2 days ago 7b5c360b11a10081908366edfedf9040c9ce32b4

PIPE-2738: Fix pixi task parsing: reorder inline tasks before subsections
Move all inline task definitions before subsection definitions to comply
with TOML structure requirements. Fixes missing test tasks (test-unit,
test-regression, test-pltest1) in pixi task list.

• pyproject.toml (version 7b5c360b11a10081908366edfedf9040c9ce32b4) (diffs)

Rui Xue 2 days ago 4f0fceefecc5ea193c434a78ea97d097baa3d807

PIPE-2738: disable auto-parentheses and use tilde trick for CLI task links
Set `add_function_parentheses = False` in `docs/source/conf.py` to
prevent Sphinx from automatically appending `()` to all function and
method cross-references across the documentation.

Additionally, updated all CLI task docstrings across the pipeline
(`pipeline/h*/cli/*.py`) to use the Sphinx tilde shorthand
(`:func:~pipeline.pkg.cli.task_name`). This replaces the verbose explicit
text alias format, keeping the source code clean while ensuring the
generated links correctly resolve to their fully qualified paths and
render without parentheses.

• docs/source/conf.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/h/cli/h_init.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/h/cli/h_tsyscal.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_antpos.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_checkproductsize.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_editimlist.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_findcont.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_makeimages.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_makeimlist.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_selfcal.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_setmodels.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hif/cli/hif_uvcontsub.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_antpos.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_bandpass.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_bandpassflag.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_diffgaincal.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_exportdata.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_flagdata.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_fluxcalflag.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_gfluxscale.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_gfluxscaleflag.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_lock_refant.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_polcalflag.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_renorm.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_restoredata.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_session_refant.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_spwphaseup.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_timegaincal.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_tsysflag.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hifa/cli/hifa_tsysflagcontamination.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hsd/cli/hsd_atmcor.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hsd/cli/hsd_baseline.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)
• pipeline/hsd/cli/hsd_imaging.py (version 4f0fceefecc5ea193c434a78ea97d097baa3d807) (diffs)

Remy Indebetouw <remy@virginia.edu> 2 days ago 42d0fc117ddf45dae7fe08789b48078ba5ae317a

PIPE-2738: Add some missed words back to `hif_applycal`
# Please enter the commit message for your changes. Lines starting
# with '#' will be kept; you may remove them yourself if you want to.
# An empty message aborts the commit.
#
# Author:    Remy Indebetouw <remy@virginia.edu>
# Date:      Wed Aug 12 21:39:26 2026 -0400
#
# interactive rebase in progress; onto 2f87b8c4e
# Last command done (1 command done):
#    reword f7c3f6078 # add some words back to hif_applycal
# Next command to do (1 remaining command):
#    pick de412898e PIPE-2738: disable auto-parentheses and use tilde trick for CLI task links
# You are currently editing a commit while rebasing branch 'PIPE-2738-improve-docs-for-MAIN-part2' on '2f87b8c4e'.
#
# Changes to be committed:
#        modified:   pipeline/hif/cli/hif_applycal.py
#

• pipeline/hif/cli/hif_applycal.py (version 42d0fc117ddf45dae7fe08789b48078ba5ae317a) (diffs)