Build: #1 failed Changes by Shawn Booth
Code commits
Pipeline
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Shawn Booth 89a62b9b6401d7c0ba1d7eb9840134778c49628c
Merge remote-tracking branch 'origin/main' into pipeline-error-communications
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Rui Xue 1fa18ea485c9483ae9961384aedc3e0d4ce45e92 m
Pull request #1790: PIPE-3061/PIPE-3027
Merge in PIPE/pipeline from PIPE-3061-examining-the-possible-memory-leak-when-running-multiple-regression-tests-on-one-pytest to main
* commit 'ebb6ced6fd1f23d977a302abef49c5d461feca85':
PIPE-3061: Update `pixi_tasks.md`
PIPE-3061: drop Python 3.10/3.11, add CASA 6.7.4 env, update docs theme
PIPE-3061: add pixi tasks for regression/unit tests and developer docs
PIPE-3061: Add `pytest-xvfb` to development requirements for headless testing support without `xvfb-run`
PIPE-3061: Update documentation to clarify xdist worker scaling and per-test timing details
PIPE-3061: Add MPI worker scaling recommendations and per-test timing details to documentation
PIPE-3061: Add usage examples for `@pytest.mark.mpi` in documentation
PIPE-3061: Further improve memory management by triggering garbage collection after clearing caches and releasing context in `PipelineTester`
PIPE-3027: Simplify MPI marker handling in pytest configuration and update description for clarity
PIPE-3027: add `@pytest.mark.mpi` marker and `--ignore-mpi-markers` option
PIPE-2061: Add fixture to clear module-level caches between tests to reduce memory footprint
PIPE-3061: Implement unsubscribe functionality in eventbus and improve the memory management for `Context` in `PipelineTester` -
Rui Xue <rx.astro@gmail.com> ebb6ced6fd1f23d977a302abef49c5d461feca85 m
PIPE-3061: Update `pixi_tasks.md`
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Rui Xue <rx.astro@gmail.com> d42126852c0284c766a041f46c36e47382b81001 m
PIPE-3061: drop Python 3.10/3.11, add CASA 6.7.4 env, update docs theme
- Bump requires-python to >=3.12; remove 3.10/3.11 classifiers
- Drop casa666-py310 and casa671-py310 pixi environments
- Add casa674-py312 feature/environment (CASA 6.7.4, Python 3.12)
- Enable casa675-py313 on osx-arm64; guard bdsf via sys_platform
marker in requirements.txt instead of platform list restriction
- Bump macos system-requirement to 15.0
- Simplify astropy pin: drop python_version conditional (3.10 gone)
- Add build-docs-fast (incremental) and build-pdf pixi tasks
- Add furo Sphinx theme to requirements_docs.txt and docs environment -
Rui Xue <rx.astro@gmail.com> 87558d0b47039b0f84760dfe0c9eae09d184db12 m
PIPE-3061: add pixi tasks for regression/unit tests and developer docs
Add two pixi tasks to pyproject.toml:
- test-regression: runs tests/regression/fast/ with pytest-xdist
(worksteal, -m "not mpi") inside a plain Python session
- test-pltest1: runs a single small ALMA-IF regression test via `casashell`
Both tasks cd into PL_WORKDIR (default: ../working) before launching,
keeping CASA logs and pipeline output out of the source tree.
PL_WORKDIR is overridable at invocation time:
PL_WORKDIR=/zfs/scratch/myrun pixi run test-regression
Also add docs/source/develdocmd/pixi_tasks.md documenting all five
pixi tasks (test-unit, test-regression, test-pltest1,
fetch-casarundata, build-docs), the available CASA environments,
PL_WORKDIR usage, and per-environment invocation examples. -
Rui Xue <rx.astro@gmail.com> 7a18fb44737e7411b666b4d547fec735bb9e78f6 m
PIPE-3061: Add `pytest-xvfb` to development requirements for headless testing support without `xvfb-run`
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Rui Xue <rx.astro@gmail.com> 1a2b9adcaa74775f5ed57162127b9132773f2488 m
PIPE-3061: Update documentation to clarify xdist worker scaling and per-test timing details
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Rui Xue <rx.astro@gmail.com> 2b588848a18322c774aaa1984949cd5c8105be68 m
PIPE-3061: Add MPI worker scaling recommendations and per-test timing details to documentation
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Ajay Vibhute 066a71cca960d6dab310199d95f057b0d7c8d10c m
Pull request #1796: PIPE-3070: changing doquantiles to boolean from string
Merge in PIPE/pipeline from PIPE-3070-change-the-value-of-doquantiles-argument-value-from-string-to-boolean to main
* commit '3225e28bc9fb8dd7374a28f163c05ba463fbe6ba':
PIPE-3070: changing doquantiles to boolean from string -
Rui Xue <rx.astro@gmail.com> a03d8c4a4d73e15e284dcdf7c14ab036edd35d73 m
PIPE-3061: Add usage examples for `@pytest.mark.mpi` in documentation
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Rui Xue 1fdf943c22c982a2fafa8be9827c6ac93cfbd1e0 m
Pull request #1789: PIPE-3060: Refactor masking logic in syspower to ensure proper boolean array handling
Merge in PIPE/pipeline from PIPE-3060-clone-typeerror-in-hifv_syspower to main
* commit '48578da916cdd083f98e572695bf6ed92de9d347':
PIPE-3060: Refactor masking logic in syspower to ensure proper boolean array handling -
Rui Xue 48182a99d008cbad907a23a6931d27675ea6fa18 m
Pull request #1792: PIPE-3063: add pipeline scripts/
Merge in PIPE/pipeline from PIPE-3063-add-scripts-for-standalone-helpers-cicd-functions to main
* commit 'b691966bbd3884dcb41b45ab29a60970f2c08337':
PIPE-3063: Update documentation in procedure_add_parallel.py to clarify task support for parallel execution
PIPE-3063: Add script to inject `parallel=True` into procedure/PPR for faster development testing -
Ajay Vibhute 3225e28bc9fb8dd7374a28f163c05ba463fbe6ba m
PIPE-3070: changing doquantiles to boolean from string
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Takeshi Nakazato bb957e3eeada2f1133358c97fbaed230fdbc2369 m
Pull request #1774: PIPE-2774 hsd atmcor selected atmtype become worse in pl2025
Merge in PIPE/pipeline from PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025 to main
* commit '6dbac1563e26e93c773bb3f9b6139dd58440b0d0':
Eliminate matplotlib.pyplot depencency
Eliminate pylab dependency
Simplify the code using numpy function
Eliminate unnecessary conditional block
Complete docstring and type annotation of smooth function
Examine separate atmowpheric features individually
Adjust smoothing box size
increase smoothing kernel size
Refactoring to reduce number of smoothing operation
bug fix on metricnorm and revised skychansel
Mitigate boundary effect of convolution
change default metric for selectModelParams to 'intsqdiff'
intsqdiff -
Rui Xue 60ddcac9ca40ee8314460cf1007d7d1310c59415 m
Pull request #1779: PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection`
Merge in PIPE/pipeline from PIPE-3034-aqua-report-datas-selection-asdm-description-section-got-comma-splitted-string to main
* commit '9a44970a9ba0fa860d5209486a307e66f954920d':
PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection` -
Rui Xue 1d2fb62039efa1638db27ef4674750eb42f4d55f m
Pull request #1777: PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder
Merge in PIPE/pipeline from PIPE-3025-remove-the-serial-model-write-enforcement-logic-in-hif_selfcal to main
* commit 'eb7e76035f6b6ca3a7d9bb131dc988dc669d61d3':
PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder -
Dirk Muders 77b65bba576542a5c2e63db2fbd0e346b73183ad m
Pull request #1778: PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning.
Merge in PIPE/pipeline from PIPE-3018_Missing_cubes_hifa_exportdata_output to main
* commit 'e26c8ead3642ecc1751599fff56925ac214f0b17':
PIPE-3018: Added doc string for add_item method to explain its behavior in detail.
PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning. -
Takeshi Nakazato 6dbac1563e26e93c773bb3f9b6139dd58440b0d0 m
Eliminate matplotlib.pyplot depencency
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Takeshi Nakazato f6934da6f8dfdba3997a01116a28b838c360f948 m
Eliminate pylab dependency
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Takeshi Nakazato 6605902ee53a01ba945f8bbcce8de86a0832c65a m
Simplify the code using numpy function
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Dirk Muders e26c8ead3642ecc1751599fff56925ac214f0b17 m
PIPE-3018: Added doc string for add_item method to explain its behavior in detail.
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Dirk Muders 993278cbb303ae10148f08146199e09e8d1d20ad m
Merge remote-tracking branch 'origin/main' into PIPE-3018_Missing_cubes_hifa_exportdata_output
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Takeshi Nakazato cfbf937b7d2cc3b77ffa1d407f47a5303e2bcde4 m
Eliminate unnecessary conditional block
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Takeshi Nakazato d906191ca22646b37e14c08e8263ea74e885fa1c m
Complete docstring and type annotation of smooth function
Also added safeguard code not to perform the smoothing operation unnecessarily. -
Takeshi Nakazato c2578a84746e49bf4c35a2698c96484bbc5d7a66 m
Merge branch 'main' into PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025
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Joshua Hoskins 75da060fa90f5525ab4ff38f6ec9e3c78812903c m
Pull request #1757: PIPE-2893 hsd baseline enable sinusoid option
Merge in PIPE/pipeline from PIPE-2893-hsd_baseline-enable-sinusoid-option to main
* commit 'a02fd8911995418b7e518da3232bd608c9c6f1b8': (26 commits)
Switching the order up in API call.
Remove a few unused imports and rearranged the import list to be better grouped and neat.
Addressing additional minor formatting suggestions.
More type-hint changes. List -> list, Dict -> dict
More type-hint changes.
Applied suggestion
Applied suggestion
More type-hint changes.
Add new test for wave_number and new sinusoid test to build_fitting_configuration() test.
Add default behavior in the build_fitting_configuration() function for when the fit_function is None.
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Update type hint according to code review suggestion.
Update type hint according to code review suggestion.
fix issue with mapped memory in insgle fitfunction case.
Changes related to Takeshi's code review.
Refactor and change tests to match up with the current build_fitting_configuration() function.
Test changes to test file to find problem.
Test changes to test file to find problem.
... -
Rui Xue b691966bbd3884dcb41b45ab29a60970f2c08337 m
PIPE-3063: Update documentation in procedure_add_parallel.py to clarify task support for parallel execution
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Rui Xue 759e9cea24c382968581f2db14b49dee6267bec1 m
PIPE-3063: Add script to inject `parallel=True` into procedure/PPR for faster development testing
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Rui Xue eb7e76035f6b6ca3a7d9bb131dc988dc669d61d3 m
PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder
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Rui Xue d87a7d922af5cbaaa24e42f894012ceb3b9d604e m
PIPE-3061: Further improve memory management by triggering garbage collection after clearing caches and releasing context in `PipelineTester`
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Rui Xue <rx.astro@gmail.com> ad99e6939dd46f3b43e47d6d9dd061d0b5908cbb m
PIPE-3027: Simplify MPI marker handling in pytest configuration and update description for clarity
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Rui Xue <rx.astro@gmail.com> ce6a72e9f88b598c68279407e4d3d312d8d934f7 m
PIPE-3027: add `@pytest.mark.mpi` marker and `--ignore-mpi-markers` option
- Add `mpi` pytest marker to `pyproject.toml`
- Auto-skip `@pytest.mark.mpi` tests in pytest_collection_modifyitems
when `MPIEnvironment.is_mpi_enabled` is False
- Add `--ignore-mpi-markers` CLI flag to disable the auto-skip, allowing
mpi-marked tests to run in a serial session
- Apply `@pytest.mark.mpi` to tests that require an MPI-enabled CASA
session: two alma_if fast tests and one vla fast test- conftest.py (version ce6a72e9f88b598c68279407e4d3d312d8d934f7) (diffs)
- pyproject.toml (version ce6a72e9f88b598c68279407e4d3d312d8d934f7) (diffs)
- tests/regression/fast/alma_if_fast_test.py (version ce6a72e9f88b598c68279407e4d3d312d8d934f7) (diffs)
- tests/regression/fast/vla_fast_test.py (version ce6a72e9f88b598c68279407e4d3d312d8d934f7) (diffs)
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Takeshi Nakazato 07f517743b331eed2d069619296b09d85dec3a2a m
Pull request #1782: PIPE-3035 bug fix to support "infiles" in VDPTaskFactory
Merge in PIPE/pipeline from PIPE-3035-paralleltemplate-doesn-t-distribute-vis-dependent-parameter-values-properly to main
* commit '7b27c5c12798e6f956051aa65083203fede4d714':
PIPE-3035 bug fix to support "infiles" in VDPTaskFactory -
Rui Xue <rx.astro@gmail.com> 70972aee0d83b0a8be223cdeb50ddca4f96ff80e m
PIPE-2061: Add fixture to clear module-level caches between tests to reduce memory footprint
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Rui Xue <rx.astro@gmail.com> 9e388ec091c0724e3181ba14affd6d25131a6290 m
PIPE-3061: Implement unsubscribe functionality in eventbus and improve the memory management for `Context` in `PipelineTester`
- pipeline/infrastructure/eventbus/__init__.py (version 9e388ec091c0724e3181ba14affd6d25131a6290) (diffs)
- pipeline/infrastructure/eventbus/eventbus.py (version 9e388ec091c0724e3181ba14affd6d25131a6290) (diffs)
- pipeline/infrastructure/timetracker.py (version 9e388ec091c0724e3181ba14affd6d25131a6290) (diffs)
- tests/testing_utils.py (version 9e388ec091c0724e3181ba14affd6d25131a6290) (diffs)
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Rui Xue <rx.astro@gmail.com> 48578da916cdd083f98e572695bf6ed92de9d347 m
PIPE-3060: Refactor masking logic in syspower to ensure proper boolean array handling
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Rui Xue 4b9c547dd168724e257904d81940e90c3f81db36 m
Pull request #1783: PIPE-3051: Add warning for nmajor limit in `CleanBase`
Merge in PIPE/pipeline from PIPE-3051-clone-hif_makeimages-stage-should-issue-warning-if-stopping-criterion-is-nmajor to main
* commit '4766493e7bd8415f96ec18d88a360ea247b71468':
PIPE-3051: Improve logging and error messages in `CleanBase`
PIPE-3051: Add warning for nmajor limit in `CleanBase` -
Rui Xue <rx.astro@gmail.com> 4766493e7bd8415f96ec18d88a360ea247b71468 m
PIPE-3051: Improve logging and error messages in `CleanBase`
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Takeshi Nakazato 7b27c5c12798e6f956051aa65083203fede4d714 m
Merge branch 'main' into PIPE-3035-paralleltemplate-doesn-t-distribute-vis-dependent-parameter-values-properly
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Ajay Vibhute bc8bd7d374246913a5b0d0428dbf1b2a1db8b69e m
Pull request #1751: PIPE-2990: fixed leading ',' in warning weblog message for ignored antennas
Merge in PIPE/pipeline from PIPE-2990-fix-leading-comma-in-warning-antennas-to-be-ignored-weblog-messages to main
* commit 'deae224f069e5606542fd1f80980c48b3d4c49c8':
PIPE-2990: minor changes suggested during PR review
PIPE-2990: added build_refantignore to build ignore refant and added test for it
PIPE-2990: fix refantignore handling
PIPE-2990: fixed leading ',' in warning weblog message for ignored antennas -
Hajime Ezawa 1663d780bb56c494683e9272d1ad43fd2da66490 m
Pull request #1749: PIPE-2913 sdpl couldn t deal with pointing distribution intersecting ra 12h
Merge in PIPE/pipeline from PIPE-2913-sdpl-couldn-t-deal-with-pointing-distribution-intersecting-ra-12h to main
* commit 'e9f658e8262ee3dcc0358d11199f92b4311bd6a4':
PIPE-2913: additional fix to hsd_baseline stage
PIPE-2913: additional fix to hsd_imaging stage
Revert "PIPE-2491: additional fix to hsd_imaging stage"
Revert "PIPE-2491: additional fix to hsd_baseline stage"
PIPE-2491: additional fix to hsd_baseline stage
PIPE-2491: additional fix to hsd_imaging stage
PIPE-2913: move rewrap_angle() to hsd/tasks/common/utils.py
PIPE-2913: additional fix to rewrap_angle()
PIPE-2913: rewrap AZ related values before pushing into datatable -
Rui Xue 569696f90eeb3328f8bc566803c156ee7b578644 m
PIPE-3051: Add warning for nmajor limit in `CleanBase`
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Ajay Vibhute ec1ef9503af9617d2b0ac7cfb1a62df76f6278ae m
Pull request #1776: PIPE-3015: ensure file is closed while getting the num rows
Merge in PIPE/pipeline from PIPE-3015-refactor-rendererutils.num_lines to main
* commit 'cc7764ad524660dcd4422eb3f0ed8983a2d24d0e':
opening file with 'utf-8' encoding
PIPE-3015: ensure file is closed while getting the num rows -
Takeshi Nakazato 567235a4cb8564e27783af5d48c14da69bb42195 m
PIPE-3035 bug fix to support "infiles" in VDPTaskFactory
There was a bug in ParallelTemplate that per-EB parameter was not distributed properly for SD tasks that takes "infiles" instead of "vis". This fix switches scope attribute depending on the name of tha parameter. -
Takeshi Nakazato 2de77ead207e8e475103d59b7ce9f69d44a57917 m
Pull request #1773: PIPE-2946 hsd imaging ignore edge channels and channels overlapped with atm lines while examining qa
Merge in PIPE/pipeline from PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa to main
* commit '0fdb5963932f33ee2464003272cceb0652d3cfba':
compliance with PEP 8
Add more explanation on channel_mask parameter
fix too busy xaxis label in contamination plot
indicate edge/ATM region with different color in the plot
Fix for NRO Pipeline error
consistently update the condition to display warning text
PIPE-2946 ignore edge channels and ATM range in contamination analysis -
Ajay Vibhute cc7764ad524660dcd4422eb3f0ed8983a2d24d0e m
opening file with 'utf-8' encoding
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Ajay Vibhute deae224f069e5606542fd1f80980c48b3d4c49c8 m
PIPE-2990: minor changes suggested during PR review
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Hajime Ezawa e9f658e8262ee3dcc0358d11199f92b4311bd6a4 m
Merge branch 'main' of https://open-bitbucket.nrao.edu/scm/pipe/pipeline into PIPE-2913-sdpl-couldn-t-deal-with-pointing-distribution-intersecting-ra-12h
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Takeshi Nakazato 0fdb5963932f33ee2464003272cceb0652d3cfba m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Rui Xue 06261ca313d3e55c704716e9e6da34e2bd9ba910 m
Pull request #1672: PIPE-888: replace the use of `list(set(...))` with `utils.deduplicate(..)` to avoid random flagcmd orders.
Merge in PIPE/pipeline from PIPE-888-the-order-of-flagging-statements-in-flagdata-commands-differs-between-pipeline-runs-at to main
* commit '10211fe16b93c4089763a8242cf9250d38a3c94c':
PIPE-888: Refactor condition checks in FluxscaleInputs and SetModelsInputs for clarity; update deduplicate function type hints to accept Iterable
PIPE-1770: remove unnecessary `warnings.catch_warnings()` context manager clause.
PIPE-2865: ensure ordered `vdp` transfer values in `hif/fluxscale` and `hif/setmodel` inputs.
PIPE-1316: preserve the order of phase/target list for `wvrgcal/tie`.
PIPE-888: replace the use of `list(set(...))` with `utils.deduplicate(..)` to avoid random flagcmd orders. -
Rui Xue <rx.astro@gmail.com> 10211fe16b93c4089763a8242cf9250d38a3c94c m
PIPE-888: Refactor condition checks in FluxscaleInputs and SetModelsInputs for clarity; update deduplicate function type hints to accept Iterable
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Rui Xue <rx.astro@gmail.com> e67a4dbf00b709517eb07779e659756019b228ef m
Merge remote-tracking branch 'origin/main' into PIPE-888-the-order-of-flagging-statements-in-flagdata-commands-differs-between-pipeline-runs-at
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Takeshi Nakazato 0dae8624162ce754d1dccbfb5c26d71b70e5fe80 m
compliance with PEP 8
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Takeshi Nakazato 11d9871595a6f22d0befdc5f8068d8cc6a0e1739 m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Ajay Vibhute e4000b70fcc588a0e70ecec252502bc40cf18c8c m
Pull request #1710: PIPE-1435 hifv testbpdcals should only flag the polarization affected by dts issues
Merge in PIPE/pipeline from PIPE-1435-hifv_testbpdcals-should-only-flag-the-polarization-affected-by-dts-issues to main
* commit '4dca9985aec72d0bb47917773ea11c5a247871c8':
PIPE-1435: minor changes suggested in PR review
PIPE-1435: avoided nested list used for weblogflagdict
PIPE-1435: showing correlation string on weblogs
PIPE-1435: displayed flagged correlation on weblogs
PIPE-1435: flagging only offending correlation per spw
PIPE-1435: flagging only offending correlation -
Ajay Vibhute 3ff4691f92f34997879e49a04e419d39f68f567f m
Pull request #1680: PIPE-2584 hifv fluxboot qa criteria
Merge in PIPE/pipeline from PIPE-2584-hifv_fluxboot-qa-criteria to main
* commit 'e247ba29224f31eb78fd7b8a81994a15b865e755':
PIPE-2584: using spws only in science scan and warning is displayed only if more than 50% science spws are missing
PIPE-2584: checking if spw is missing in all scans rather than each scan
PIPE-2584: updated matric score
PIPE-2584: added QA message when there are no rows for a given scan and spw
PIPE-2584: Checking model_data column is present and calibrator.ms is not empty before running visstat
PIPE-2584: added applies_to to the QA score
PIPE-2584: using visstat to check model column is set to 1 or not
PIPE-2584: minor changes suggested in PR
PIPE-2584: check to ensure flux density is measured
PIPE-2584: Add QA scoring checks for flagged SPWs, calibrator data, and spectral index limits -
Rui Xue <rx.astro@gmail.com> 9a44970a9ba0fa860d5209486a307e66f954920d m
PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection`
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Shawn Booth 48f6ccb438ddc048eed491ed1d5a8ab225fd50e3 m
Pull request #1758: PIPE-2320: hifa_flagdata heuristic for determining FDM spws should use msmd.almaspws
Merge in PIPE/pipeline from PIPE-2320-hifa_flagdata-heuristic-for-determining-fdm-spws-should-use-msmd.almaspws to main
* commit '84bbb0b3dd7e0e677537ac0c9a99f796ff390cc4':
PIPE-2320: removed unused import and added _fdm_spws default to class definition
PIPE-2320: added unit tests to exercise heuristics change
PIPE-2320: use CASA metadata for ALMA FDM detection -
Dirk Muders 20cf895fc0ed76bdd1a7ba243718353b540d5eda m
PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning.
- pipeline/hif/tasks/makeimages/makeimages.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/makeimages/resultobjects.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/selfcal/selfcal.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/cleanbase.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/renderer.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/resultobjects.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/tclean.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/infrastructure/imagelibrary.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
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Takeshi Nakazato 1c56a8aaaa26bc193a8fa718b5773dc9124f9652 m
Examine separate atmowpheric features individually
Previous impelentation combined all the detected atmospheric features
together to calculate metric values. This commit evaluates metric values
for each atmospheric feature individually and takes sum of them. -
Takeshi Nakazato 87641e4339e44075d04b7058bd4e3dbeca53d88d m
Adjust smoothing box size
Smoothing box size is extended to 0.016 * nchan (factor was 0.004
previously). Set upper limit depending on the width of the atmospheric
feature (nchatm * 0.2). -
Takeshi Nakazato 773c00f1db770de750090d891802c9a573ff870a m
Add more explanation on channel_mask parameter
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Takeshi Nakazato 21b281a3aeb48fe17b03939e6932cd6c9e549c32 m
increase smoothing kernel size
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Joshua Hoskins a02fd8911995418b7e518da3232bd608c9c6f1b8 m
Merge branch 'main' into PIPE-2893-hsd_baseline-enable-sinusoid-option
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Takeshi Nakazato a8f9f6ed98054530edd94b18d6aae009bc715538 m
Refactoring to reduce number of smoothing operation
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Takeshi Nakazato a9b49a4a86bcf203f35e2ec1b67676ac13ab1c83 m
bug fix on metricnorm and revised skychansel
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Takeshi Nakazato c94e640f8edeb03c5a90a6eb8c9229fcdf1ef106 m
Mitigate boundary effect of convolution
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Ajay Vibhute ebcb7dc8832e630bb76f6bcfacb8c43fba3d4b5b m
PIPE-3015: ensure file is closed while getting the num rows
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Takeshi Nakazato 53b199b8829ffc88ce98f526d45a00a3b282c9e9 m
fix too busy xaxis label in contamination plot
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Takeshi Nakazato c82c9db997ebb20a58204b5c35afa68ebc75c823 m
change default metric for selectModelParams to 'intsqdiff'
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Joshua Hoskins 3194ce03631b16ce48da5efba930d1803a3bdfdf m
Switching the order up in API call.
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Joshua Hoskins 6465560ec6763cfd690ef405d706a78ba3f3be9f m
Remove a few unused imports and rearranged the import list to be better grouped and neat.
- pipeline/hsd/heuristics/baselineparamconfig.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/hsd/heuristics/fitorder.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/hsd/tasks/baseline/baseline.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/infrastructure/basetask.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
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Joshua Hoskins fa682e7c0002f255ea9faf1598b6fd71c955089f m
Addressing additional minor formatting suggestions.
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Joshua Hoskins 18b31e45e29ff1af4d0a1a5195236276cc00973e m
More type-hint changes. List -> list, Dict -> dict
- pipeline/hsd/heuristics/baselineparamconfig.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
- pipeline/hsd/tasks/baseline/baseline.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
- pipeline/hsd/tasks/baseline/worker.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
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Ajay Vibhute e247ba29224f31eb78fd7b8a81994a15b865e755 m
PIPE-2584: using spws only in science scan and warning is displayed only if more than 50% science spws are missing
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Joshua Hoskins 253bcebeaa5f09b19b7a7636211d9463053d8ce9 m
Merge remote-tracking branch 'origin/PIPE-2893-hsd_baseline-enable-sinusoid-option' into PIPE-2893-hsd_baseline-enable-sinusoid-option
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Joshua Hoskins 59b3cb0065a2521000a6587a43a69d23d09a14ff m
More type-hint changes.
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Takeshi Nakazato 4e9f8d632e183e9ff43ff5f28f3bc70879f59b51 m
Applied suggestion
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Takeshi Nakazato 152328bc229719751b50b2bb10d76ece844414a3 m
Applied suggestion
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Joshua Hoskins e6a52b927f859d98fc02a368abf8b2b2dbc16749 m
More type-hint changes.
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Takeshi Nakazato 7fa543329f27f5097adf0fa3b93bc94327589662 m
Merge branch 'main' into PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025
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Joshua Hoskins 70714edeed87ad424dd1cafd6cf61cd10b4ce7ef m
Add new test for wave_number and new sinusoid test to build_fitting_configuration() test.
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Takeshi Nakazato 49f58bcd5d6eb9431e3e708a6b40a7595eb8415c m
indicate edge/ATM region with different color in the plot
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Takeshi Nakazato 2a4e146cfc580cac71ba3c5ba8af2888c3e66f05 m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Takeshi Nakazato 1586870cdc9e7d9aede5b7dd778bb3d14fc57502 m
Fix for NRO Pipeline error
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Ajay Vibhute 723d091829937fa1e72a62b7477c9e02ff667451 m
PIPE-2584: checking if spw is missing in all scans rather than each scan
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Takeshi Nakazato d140e9d464018097c3c15732a46f214597c1f4fb m
consistently update the condition to display warning text
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Takeshi Nakazato 59f8cf59629dfb4a60d59c39c62972a56b87367b m
PIPE-2946 ignore edge channels and ATM range in contamination analysis
Logic to determine edge channels and the range of ATM features are
moved/copied from scorecalculator.py -
Ajay Vibhute 5f9ef099ce477138f13533d4e33175b9bcf1411f m
PIPE-2990: added build_refantignore to build ignore refant and added test for it
- pipeline/hifv/tasks/circfeedpolcal/circfeedpolcal.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/finalcals/finalcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/fluxscale/fluxboot.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/fluxscale/solint.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/semiFinalBPdcals/semiFinalBPdcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/testBPdcals/testBPdcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/infrastructure/utils/utils.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/infrastructure/utils/utils_test.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
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Joshua Hoskins c5a821e2682b48ae47784c0e14bf93cd38aa2db3 m
Add default behavior in the build_fitting_configuration() function for when the fit_function is None.
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Joshua Hoskins c89294b5fdc390f470ac042db583b8ff2f39c4bb m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
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Joshua Hoskins b30e7a69112366a4a71b51fa871fb0ca3bc1cd74 m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
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Joshua Hoskins 26bc3d984f001aac91188fcfe5a9be6dcd7eb040 m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
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Shawn Booth 84bbb0b3dd7e0e677537ac0c9a99f796ff390cc4 m
PIPE-2320: removed unused import and added _fdm_spws default to class definition
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Joshua Hoskins f19281330bc1d40bf73156de99a1467654704e7d m
Update type hint according to code review suggestion.
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Joshua Hoskins c977dc6a8cc0b3c60a7c47a3a503fba07561ab0e m
Update type hint according to code review suggestion.
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Joshua Hoskins 4ef1bd75f94403b0e9e57c4dbfafa417af059eec m
fix issue with mapped memory in insgle fitfunction case.
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Joshua Hoskins 9cde0b2ba7e308ab065b85d4fa1d848b61b1f615 m
Changes related to Takeshi's code review.
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Joshua Hoskins 17eef59cf4fa18381a6ca8223288985b9aa90539 m
Refactor and change tests to match up with the current build_fitting_configuration() function.
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Joshua Hoskins 6d52ee0f6ca2c40d171ed6517d87996bd972d6cf m
Test changes to test file to find problem.