Build: #2 was successful Changes by Ajay Vibhute
Code commits
Pipeline
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Ajay Vibhute 09e379ad6933d4a0bc51b3d69e45e2e6c2c56537
Merge branch 'main' into PIPE-684-vla-mosaic-gridder-heuristic-with-field-label
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Ajay Vibhute cb4cd6204af5da6fe6f724251bf791b18b07ff40
PIPE-684: Updated the mosaic detection heuristic to use fields belonging to the current band
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Takeshi Nakazato bb957e3eeada2f1133358c97fbaed230fdbc2369 m
Pull request #1774: PIPE-2774 hsd atmcor selected atmtype become worse in pl2025
Merge in PIPE/pipeline from PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025 to main
* commit '6dbac1563e26e93c773bb3f9b6139dd58440b0d0':
Eliminate matplotlib.pyplot depencency
Eliminate pylab dependency
Simplify the code using numpy function
Eliminate unnecessary conditional block
Complete docstring and type annotation of smooth function
Examine separate atmowpheric features individually
Adjust smoothing box size
increase smoothing kernel size
Refactoring to reduce number of smoothing operation
bug fix on metricnorm and revised skychansel
Mitigate boundary effect of convolution
change default metric for selectModelParams to 'intsqdiff'
intsqdiff -
Rui Xue 60ddcac9ca40ee8314460cf1007d7d1310c59415 m
Pull request #1779: PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection`
Merge in PIPE/pipeline from PIPE-3034-aqua-report-datas-selection-asdm-description-section-got-comma-splitted-string to main
* commit '9a44970a9ba0fa860d5209486a307e66f954920d':
PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection` -
Rui Xue 1d2fb62039efa1638db27ef4674750eb42f4d55f m
Pull request #1777: PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder
Merge in PIPE/pipeline from PIPE-3025-remove-the-serial-model-write-enforcement-logic-in-hif_selfcal to main
* commit 'eb7e76035f6b6ca3a7d9bb131dc988dc669d61d3':
PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder -
Dirk Muders 77b65bba576542a5c2e63db2fbd0e346b73183ad m
Pull request #1778: PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning.
Merge in PIPE/pipeline from PIPE-3018_Missing_cubes_hifa_exportdata_output to main
* commit 'e26c8ead3642ecc1751599fff56925ac214f0b17':
PIPE-3018: Added doc string for add_item method to explain its behavior in detail.
PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning. -
Takeshi Nakazato 6dbac1563e26e93c773bb3f9b6139dd58440b0d0 m
Eliminate matplotlib.pyplot depencency
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Takeshi Nakazato f6934da6f8dfdba3997a01116a28b838c360f948 m
Eliminate pylab dependency
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Takeshi Nakazato 6605902ee53a01ba945f8bbcce8de86a0832c65a m
Simplify the code using numpy function
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Dirk Muders e26c8ead3642ecc1751599fff56925ac214f0b17 m
PIPE-3018: Added doc string for add_item method to explain its behavior in detail.
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Dirk Muders 993278cbb303ae10148f08146199e09e8d1d20ad m
Merge remote-tracking branch 'origin/main' into PIPE-3018_Missing_cubes_hifa_exportdata_output
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Takeshi Nakazato cfbf937b7d2cc3b77ffa1d407f47a5303e2bcde4 m
Eliminate unnecessary conditional block
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Takeshi Nakazato d906191ca22646b37e14c08e8263ea74e885fa1c m
Complete docstring and type annotation of smooth function
Also added safeguard code not to perform the smoothing operation unnecessarily. -
Takeshi Nakazato c2578a84746e49bf4c35a2698c96484bbc5d7a66 m
Merge branch 'main' into PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025
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Joshua Hoskins 75da060fa90f5525ab4ff38f6ec9e3c78812903c m
Pull request #1757: PIPE-2893 hsd baseline enable sinusoid option
Merge in PIPE/pipeline from PIPE-2893-hsd_baseline-enable-sinusoid-option to main
* commit 'a02fd8911995418b7e518da3232bd608c9c6f1b8': (26 commits)
Switching the order up in API call.
Remove a few unused imports and rearranged the import list to be better grouped and neat.
Addressing additional minor formatting suggestions.
More type-hint changes. List -> list, Dict -> dict
More type-hint changes.
Applied suggestion
Applied suggestion
More type-hint changes.
Add new test for wave_number and new sinusoid test to build_fitting_configuration() test.
Add default behavior in the build_fitting_configuration() function for when the fit_function is None.
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
Update type hint according to code review suggestion.
Update type hint according to code review suggestion.
fix issue with mapped memory in insgle fitfunction case.
Changes related to Takeshi's code review.
Refactor and change tests to match up with the current build_fitting_configuration() function.
Test changes to test file to find problem.
Test changes to test file to find problem.
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Rui Xue eb7e76035f6b6ca3a7d9bb131dc988dc669d61d3 m
PIPE-3025: Remove serial model write enforcement logic in tclean for 'mosaic' gridder
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Takeshi Nakazato 07f517743b331eed2d069619296b09d85dec3a2a m
Pull request #1782: PIPE-3035 bug fix to support "infiles" in VDPTaskFactory
Merge in PIPE/pipeline from PIPE-3035-paralleltemplate-doesn-t-distribute-vis-dependent-parameter-values-properly to main
* commit '7b27c5c12798e6f956051aa65083203fede4d714':
PIPE-3035 bug fix to support "infiles" in VDPTaskFactory -
Rui Xue 4b9c547dd168724e257904d81940e90c3f81db36 m
Pull request #1783: PIPE-3051: Add warning for nmajor limit in `CleanBase`
Merge in PIPE/pipeline from PIPE-3051-clone-hif_makeimages-stage-should-issue-warning-if-stopping-criterion-is-nmajor to main
* commit '4766493e7bd8415f96ec18d88a360ea247b71468':
PIPE-3051: Improve logging and error messages in `CleanBase`
PIPE-3051: Add warning for nmajor limit in `CleanBase` -
Rui Xue <rx.astro@gmail.com> 4766493e7bd8415f96ec18d88a360ea247b71468 m
PIPE-3051: Improve logging and error messages in `CleanBase`
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Takeshi Nakazato 7b27c5c12798e6f956051aa65083203fede4d714 m
Merge branch 'main' into PIPE-3035-paralleltemplate-doesn-t-distribute-vis-dependent-parameter-values-properly
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Ajay Vibhute bc8bd7d374246913a5b0d0428dbf1b2a1db8b69e m
Pull request #1751: PIPE-2990: fixed leading ',' in warning weblog message for ignored antennas
Merge in PIPE/pipeline from PIPE-2990-fix-leading-comma-in-warning-antennas-to-be-ignored-weblog-messages to main
* commit 'deae224f069e5606542fd1f80980c48b3d4c49c8':
PIPE-2990: minor changes suggested during PR review
PIPE-2990: added build_refantignore to build ignore refant and added test for it
PIPE-2990: fix refantignore handling
PIPE-2990: fixed leading ',' in warning weblog message for ignored antennas -
Hajime Ezawa 1663d780bb56c494683e9272d1ad43fd2da66490 m
Pull request #1749: PIPE-2913 sdpl couldn t deal with pointing distribution intersecting ra 12h
Merge in PIPE/pipeline from PIPE-2913-sdpl-couldn-t-deal-with-pointing-distribution-intersecting-ra-12h to main
* commit 'e9f658e8262ee3dcc0358d11199f92b4311bd6a4':
PIPE-2913: additional fix to hsd_baseline stage
PIPE-2913: additional fix to hsd_imaging stage
Revert "PIPE-2491: additional fix to hsd_imaging stage"
Revert "PIPE-2491: additional fix to hsd_baseline stage"
PIPE-2491: additional fix to hsd_baseline stage
PIPE-2491: additional fix to hsd_imaging stage
PIPE-2913: move rewrap_angle() to hsd/tasks/common/utils.py
PIPE-2913: additional fix to rewrap_angle()
PIPE-2913: rewrap AZ related values before pushing into datatable -
Rui Xue 569696f90eeb3328f8bc566803c156ee7b578644 m
PIPE-3051: Add warning for nmajor limit in `CleanBase`
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Ajay Vibhute ec1ef9503af9617d2b0ac7cfb1a62df76f6278ae m
Pull request #1776: PIPE-3015: ensure file is closed while getting the num rows
Merge in PIPE/pipeline from PIPE-3015-refactor-rendererutils.num_lines to main
* commit 'cc7764ad524660dcd4422eb3f0ed8983a2d24d0e':
opening file with 'utf-8' encoding
PIPE-3015: ensure file is closed while getting the num rows -
Takeshi Nakazato 567235a4cb8564e27783af5d48c14da69bb42195 m
PIPE-3035 bug fix to support "infiles" in VDPTaskFactory
There was a bug in ParallelTemplate that per-EB parameter was not distributed properly for SD tasks that takes "infiles" instead of "vis". This fix switches scope attribute depending on the name of tha parameter. -
Takeshi Nakazato 2de77ead207e8e475103d59b7ce9f69d44a57917 m
Pull request #1773: PIPE-2946 hsd imaging ignore edge channels and channels overlapped with atm lines while examining qa
Merge in PIPE/pipeline from PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa to main
* commit '0fdb5963932f33ee2464003272cceb0652d3cfba':
compliance with PEP 8
Add more explanation on channel_mask parameter
fix too busy xaxis label in contamination plot
indicate edge/ATM region with different color in the plot
Fix for NRO Pipeline error
consistently update the condition to display warning text
PIPE-2946 ignore edge channels and ATM range in contamination analysis -
Ajay Vibhute cc7764ad524660dcd4422eb3f0ed8983a2d24d0e m
opening file with 'utf-8' encoding
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Ajay Vibhute deae224f069e5606542fd1f80980c48b3d4c49c8 m
PIPE-2990: minor changes suggested during PR review
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Hajime Ezawa e9f658e8262ee3dcc0358d11199f92b4311bd6a4 m
Merge branch 'main' of https://open-bitbucket.nrao.edu/scm/pipe/pipeline into PIPE-2913-sdpl-couldn-t-deal-with-pointing-distribution-intersecting-ra-12h
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Takeshi Nakazato 0fdb5963932f33ee2464003272cceb0652d3cfba m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Rui Xue 06261ca313d3e55c704716e9e6da34e2bd9ba910 m
Pull request #1672: PIPE-888: replace the use of `list(set(...))` with `utils.deduplicate(..)` to avoid random flagcmd orders.
Merge in PIPE/pipeline from PIPE-888-the-order-of-flagging-statements-in-flagdata-commands-differs-between-pipeline-runs-at to main
* commit '10211fe16b93c4089763a8242cf9250d38a3c94c':
PIPE-888: Refactor condition checks in FluxscaleInputs and SetModelsInputs for clarity; update deduplicate function type hints to accept Iterable
PIPE-1770: remove unnecessary `warnings.catch_warnings()` context manager clause.
PIPE-2865: ensure ordered `vdp` transfer values in `hif/fluxscale` and `hif/setmodel` inputs.
PIPE-1316: preserve the order of phase/target list for `wvrgcal/tie`.
PIPE-888: replace the use of `list(set(...))` with `utils.deduplicate(..)` to avoid random flagcmd orders. -
Rui Xue <rx.astro@gmail.com> 10211fe16b93c4089763a8242cf9250d38a3c94c m
PIPE-888: Refactor condition checks in FluxscaleInputs and SetModelsInputs for clarity; update deduplicate function type hints to accept Iterable
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Rui Xue <rx.astro@gmail.com> e67a4dbf00b709517eb07779e659756019b228ef m
Merge remote-tracking branch 'origin/main' into PIPE-888-the-order-of-flagging-statements-in-flagdata-commands-differs-between-pipeline-runs-at
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Takeshi Nakazato 0dae8624162ce754d1dccbfb5c26d71b70e5fe80 m
compliance with PEP 8
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Takeshi Nakazato 11d9871595a6f22d0befdc5f8068d8cc6a0e1739 m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Ajay Vibhute e4000b70fcc588a0e70ecec252502bc40cf18c8c m
Pull request #1710: PIPE-1435 hifv testbpdcals should only flag the polarization affected by dts issues
Merge in PIPE/pipeline from PIPE-1435-hifv_testbpdcals-should-only-flag-the-polarization-affected-by-dts-issues to main
* commit '4dca9985aec72d0bb47917773ea11c5a247871c8':
PIPE-1435: minor changes suggested in PR review
PIPE-1435: avoided nested list used for weblogflagdict
PIPE-1435: showing correlation string on weblogs
PIPE-1435: displayed flagged correlation on weblogs
PIPE-1435: flagging only offending correlation per spw
PIPE-1435: flagging only offending correlation -
Ajay Vibhute 3ff4691f92f34997879e49a04e419d39f68f567f m
Pull request #1680: PIPE-2584 hifv fluxboot qa criteria
Merge in PIPE/pipeline from PIPE-2584-hifv_fluxboot-qa-criteria to main
* commit 'e247ba29224f31eb78fd7b8a81994a15b865e755':
PIPE-2584: using spws only in science scan and warning is displayed only if more than 50% science spws are missing
PIPE-2584: checking if spw is missing in all scans rather than each scan
PIPE-2584: updated matric score
PIPE-2584: added QA message when there are no rows for a given scan and spw
PIPE-2584: Checking model_data column is present and calibrator.ms is not empty before running visstat
PIPE-2584: added applies_to to the QA score
PIPE-2584: using visstat to check model column is set to 1 or not
PIPE-2584: minor changes suggested in PR
PIPE-2584: check to ensure flux density is measured
PIPE-2584: Add QA scoring checks for flagged SPWs, calibrator data, and spectral index limits -
Rui Xue <rx.astro@gmail.com> 9a44970a9ba0fa860d5209486a307e66f954920d m
PIPE-3034: Fix AQUA report formatting error due to single-string `vis` specifications of `TargetDataSelection`
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Shawn Booth 48f6ccb438ddc048eed491ed1d5a8ab225fd50e3 m
Pull request #1758: PIPE-2320: hifa_flagdata heuristic for determining FDM spws should use msmd.almaspws
Merge in PIPE/pipeline from PIPE-2320-hifa_flagdata-heuristic-for-determining-fdm-spws-should-use-msmd.almaspws to main
* commit '84bbb0b3dd7e0e677537ac0c9a99f796ff390cc4':
PIPE-2320: removed unused import and added _fdm_spws default to class definition
PIPE-2320: added unit tests to exercise heuristics change
PIPE-2320: use CASA metadata for ALMA FDM detection -
Dirk Muders 20cf895fc0ed76bdd1a7ba243718353b540d5eda m
PIPE-3018: Applied changes made in PIPE-3012 for the PL2025 release and changed the image library 'overwrite' parameter to 'overwrite_on_export' to clarify the meaning.
- pipeline/hif/tasks/makeimages/makeimages.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/makeimages/resultobjects.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/selfcal/selfcal.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/cleanbase.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/renderer.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/resultobjects.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/hif/tasks/tclean/tclean.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
- pipeline/infrastructure/imagelibrary.py (version 20cf895fc0ed76bdd1a7ba243718353b540d5eda) (diffs)
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Takeshi Nakazato 1c56a8aaaa26bc193a8fa718b5773dc9124f9652 m
Examine separate atmowpheric features individually
Previous impelentation combined all the detected atmospheric features
together to calculate metric values. This commit evaluates metric values
for each atmospheric feature individually and takes sum of them. -
Takeshi Nakazato 87641e4339e44075d04b7058bd4e3dbeca53d88d m
Adjust smoothing box size
Smoothing box size is extended to 0.016 * nchan (factor was 0.004
previously). Set upper limit depending on the width of the atmospheric
feature (nchatm * 0.2). -
Takeshi Nakazato 773c00f1db770de750090d891802c9a573ff870a m
Add more explanation on channel_mask parameter
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Takeshi Nakazato 21b281a3aeb48fe17b03939e6932cd6c9e549c32 m
increase smoothing kernel size
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Joshua Hoskins a02fd8911995418b7e518da3232bd608c9c6f1b8 m
Merge branch 'main' into PIPE-2893-hsd_baseline-enable-sinusoid-option
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Takeshi Nakazato a8f9f6ed98054530edd94b18d6aae009bc715538 m
Refactoring to reduce number of smoothing operation
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Takeshi Nakazato a9b49a4a86bcf203f35e2ec1b67676ac13ab1c83 m
bug fix on metricnorm and revised skychansel
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Takeshi Nakazato c94e640f8edeb03c5a90a6eb8c9229fcdf1ef106 m
Mitigate boundary effect of convolution
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Ajay Vibhute ebcb7dc8832e630bb76f6bcfacb8c43fba3d4b5b m
PIPE-3015: ensure file is closed while getting the num rows
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Takeshi Nakazato 53b199b8829ffc88ce98f526d45a00a3b282c9e9 m
fix too busy xaxis label in contamination plot
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Takeshi Nakazato c82c9db997ebb20a58204b5c35afa68ebc75c823 m
change default metric for selectModelParams to 'intsqdiff'
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Joshua Hoskins 3194ce03631b16ce48da5efba930d1803a3bdfdf m
Switching the order up in API call.
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Joshua Hoskins 6465560ec6763cfd690ef405d706a78ba3f3be9f m
Remove a few unused imports and rearranged the import list to be better grouped and neat.
- pipeline/hsd/heuristics/baselineparamconfig.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/hsd/heuristics/fitorder.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/hsd/tasks/baseline/baseline.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
- pipeline/infrastructure/basetask.py (version 6465560ec6763cfd690ef405d706a78ba3f3be9f) (diffs)
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Joshua Hoskins fa682e7c0002f255ea9faf1598b6fd71c955089f m
Addressing additional minor formatting suggestions.
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Joshua Hoskins 18b31e45e29ff1af4d0a1a5195236276cc00973e m
More type-hint changes. List -> list, Dict -> dict
- pipeline/hsd/heuristics/baselineparamconfig.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
- pipeline/hsd/tasks/baseline/baseline.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
- pipeline/hsd/tasks/baseline/worker.py (version 18b31e45e29ff1af4d0a1a5195236276cc00973e) (diffs)
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Ajay Vibhute e247ba29224f31eb78fd7b8a81994a15b865e755 m
PIPE-2584: using spws only in science scan and warning is displayed only if more than 50% science spws are missing
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Joshua Hoskins 253bcebeaa5f09b19b7a7636211d9463053d8ce9 m
Merge remote-tracking branch 'origin/PIPE-2893-hsd_baseline-enable-sinusoid-option' into PIPE-2893-hsd_baseline-enable-sinusoid-option
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Joshua Hoskins 59b3cb0065a2521000a6587a43a69d23d09a14ff m
More type-hint changes.
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Takeshi Nakazato 4e9f8d632e183e9ff43ff5f28f3bc70879f59b51 m
Applied suggestion
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Takeshi Nakazato 152328bc229719751b50b2bb10d76ece844414a3 m
Applied suggestion
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Joshua Hoskins e6a52b927f859d98fc02a368abf8b2b2dbc16749 m
More type-hint changes.
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Takeshi Nakazato 7fa543329f27f5097adf0fa3b93bc94327589662 m
Merge branch 'main' into PIPE-2774-hsd_atmcor-selected-atmtype-become-worse-in-pl2025
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Joshua Hoskins 70714edeed87ad424dd1cafd6cf61cd10b4ce7ef m
Add new test for wave_number and new sinusoid test to build_fitting_configuration() test.
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Takeshi Nakazato 49f58bcd5d6eb9431e3e708a6b40a7595eb8415c m
indicate edge/ATM region with different color in the plot
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Takeshi Nakazato 2a4e146cfc580cac71ba3c5ba8af2888c3e66f05 m
Merge branch 'main' into PIPE-2946-hsd_imaging-ignore-edge-channels-and-channels-overlapped-with-atm-lines-while-examining-qa
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Takeshi Nakazato 1586870cdc9e7d9aede5b7dd778bb3d14fc57502 m
Fix for NRO Pipeline error
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Ajay Vibhute 723d091829937fa1e72a62b7477c9e02ff667451 m
PIPE-2584: checking if spw is missing in all scans rather than each scan
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Luke Maud bb47a3ac56b40d76bf5b29d088ae96b6aecd9f28 m
Pull request #1753: PIPE-2694: add check of candidate fields and return None if not found
Merge in PIPE/pipeline from PIPE-2694-hifa_gfluxscale-qa-undefined-score-due-to-incorrect-field-assessment-min-arg-empty to main
* commit '99b7229a29a2ecfad502e62ab58714b851191497':
PIPE-2694 removed empty spaces
PIPE-2694_correct_return_based_on_PR_text
PIPE-2694_description_edit
PIPE-2694_edits_to_clean_up_logic_after_first_PR
PIPE-2694: add check of candidate fields and return None if not found -
Takeshi Nakazato d140e9d464018097c3c15732a46f214597c1f4fb m
consistently update the condition to display warning text
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Takeshi Nakazato 59f8cf59629dfb4a60d59c39c62972a56b87367b m
PIPE-2946 ignore edge channels and ATM range in contamination analysis
Logic to determine edge channels and the range of ATM features are
moved/copied from scorecalculator.py -
Shawn Booth ac059c739e7b9d5e3e4900639cb9de77c0a1ebe6 m
Pull request #1738: PIPE-2473: Change hifv_hanning to use new mstransform with pass through
Merge in PIPE/pipeline from PIPE-2473-change-hifv_hanning-to-use-new-mstransform-with-pass-through to main
* commit '61ae98b99f4c16b7da408b5648fc28d92572ee09':
PIPE-2473: fixed docstrings using Return instead of preferred Return; used assigned variable temp_ms instead of hard-coded strings; updated CASA version to 6.7.3 for hanningsmooth parameter exposure
PIPE-2473: added backfill of inputs.spws_to_smooth for automatic detection workflow; added test cases to exercise inputs.spws_to_smooth cases
PIPE-2473: added unit tests to cover the hanning module
PIPE-2473: enabled spw selection for hanningsmooth CASA task and removed use of ms tools; cleaned up some code logic and fixed potential error routes -
Ajay Vibhute 5f9ef099ce477138f13533d4e33175b9bcf1411f m
PIPE-2990: added build_refantignore to build ignore refant and added test for it
- pipeline/hifv/tasks/circfeedpolcal/circfeedpolcal.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/finalcals/finalcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/fluxscale/fluxboot.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/fluxscale/solint.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/semiFinalBPdcals/semiFinalBPdcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/hifv/tasks/testBPdcals/testBPdcals.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/infrastructure/utils/utils.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
- pipeline/infrastructure/utils/utils_test.py (version 5f9ef099ce477138f13533d4e33175b9bcf1411f) (diffs)
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Shawn Booth 7b4b761df7dc444059837a8201775dbe9b74ec10 m
Pull request #1743: PIPE-1836: Clean Up Deprecation Warnings
Merge in PIPE/pipeline from pipe-1836-clean-up-deprecation-warnings to main
* commit 'bb482b1f169f76d0610ff8b695fafc94f0b37405':
PIPE-2666: fixed indentation issue in mako file
PIPE-2663: added explicit data format 'o' to mimic plot_date default
PIPE-1836: improved numpy code per reviewer comments
PIPE-1836: removed more deprecated newshape keyword arguments
PIPE-1836: remove deprecated newshape keyword argument in np.reshape; added filter argument to tar.extractall calls
PIPE-2665: fixed additional array-to-scalar deprecation warnings; switched deprecated fig.set_constrained_layout_pads call in favor of fig.get_layout_engine().set
PIPE-1836: fixed numpy rename leading to import error
PIPE-2984: fixed pyparsing deprecation warnings in conversion.py
PIPE-1836: changed deprecated interpolation parameter in numpy.percentile to use method name instead
PIPE-2666: replace use of deprecated matplotlib.pyplot.cm.get_cmap
PIPE-2665: fixed numpy scalar conversion warnings when converting an array to a scalar
PIPE-2663: converted all deprecated calls to pyplot.plot_date to pyplot.plot -
Luke Maud c51d15a957cd2cf7aa627407563c3836d2577c2d m
Pull request #1765: PIPE-2932 change fraction flag limit to 0.5 and logics to equal and greater than
Merge in PIPE/pipeline from PIPE-2932-stop-hifa_diffgaincal-from-also-flagging-target-solutions-when-some-scan-groups-are-fully to main
* commit '6357f6a46b48c324e28a1bbec8a4909fa5f7f9db':
PIPE-2932 update comment with comma
PIPE-2932 change fraction flag limit to 0.5 and logics to equal and greater than -
Kristin Berry 6357f6a46b48c324e28a1bbec8a4909fa5f7f9db m
PIPE-2932 update comment with comma
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Rui Xue 5f73f8ce047cc9d78f02675f1755fa8bb243e808 m
Pull request #1752: PIPE-1677: multiple mses in vlass imaging pipeline
Merge in PIPE/pipeline from PIPE-1677-multiple-mses-in-vlass-imaging-pipeline to main
* commit '4fa7558f183f744ef44c52687ea70abdbe63022b':
PIPE-1677: Refactor `get_sourcename` method in `ImageParamsHeuristics` for improved readability
PIPE-1677: Refactor logging statements in `ImageParamsHeuristics` and `ImageParamsHeuristicsVlassQl`
PIPE-1677: Update `is_eph_obj` method in VLASS heuristics to include type hints and detailed docstrings
PIPE-1677: Remove the `spwsel_lsrk` specification workaround for multi-MS case.
PIPE-1667: Override `is_eph_obj` in `ImageParamsHeuristicsVlassQl` to disable ephemeris checks
PIPE-1677: Add multi-MS support for the VLASS imaging pipeline in `hif_editimlist`, `hif_makeimages`/`hif_tclean`, and imaging heuristics classes.
PIPE-1677: Support multiple MSes in `Transformimagedata`
PIPE-1677: Improve `vlass_selfcal.mako` for better multi-vis support
PIPE-1677: Adjust `hifv_checkflag` summary rendering for better multi-vis support
PIPE-1677: Refactor `hifv_statwt` rendering to support multiple MSes for VLASS
PIPE-1677: Convert `hifv_exportvlassdata` to a "multi-vis" task and add support for archiving multiple self-calibration tables and flag versions -
Rui Xue 4fa7558f183f744ef44c52687ea70abdbe63022b m
PIPE-1677: Refactor `get_sourcename` method in `ImageParamsHeuristics` for improved readability
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Luke Maud 464b85b3f776af89d91eb7e023091e2eee133dde m
Pull request #1740: PIPE-2901 add commentary explanations into hifa heursitics snr code
Merge in PIPE/pipeline from PIPE-2901-add-commentary-explanations-into-hifa-heursitics-snr-code to main
* commit 'd43d5679e37928cbc9f1d50a362290982cb42343':
PIPE-2901: Improve comments and variable naming in SNR calculations for clarity
PIPE-2901: Fix some minor typos with small codestyle updates
PIPE-2901: updated gaincalSNR function in fluxscale/qa.py for compatability with snr.py calculations
PIPE-2901: correct all parameters nbaselines to nEffectiveAntennas
PIPE-2901: edit to n-3 equation and rename nbaselines to nEffectiveAntennas
add PIPE-2901 explination and update hard coded ant numbers to fiducal variable -
Joshua Hoskins c5a821e2682b48ae47784c0e14bf93cd38aa2db3 m
Add default behavior in the build_fitting_configuration() function for when the fit_function is None.
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Rui Xue d43d5679e37928cbc9f1d50a362290982cb42343 m
PIPE-2901: Improve comments and variable naming in SNR calculations for clarity
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Joshua Hoskins c89294b5fdc390f470ac042db583b8ff2f39c4bb m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
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Joshua Hoskins b30e7a69112366a4a71b51fa871fb0ca3bc1cd74 m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
-
Joshua Hoskins 26bc3d984f001aac91188fcfe5a9be6dcd7eb040 m
Fixed _get_fir_param() function error or lack thereof and added new .is_sinusoid_fit()
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Rui Xue a8a3f62d8cc3c19a44797d23af0ff9f091b455ed m
Pull request #1763: PIPE-3004: Refactor FieldTable._read_table to optimize scan checks and reduce unnecessary computations
Merge in PIPE/pipeline from PIPE-3004-refactoring-fieldtable._read_table to main
* commit '7f44fe5b8df0412da26d172ccf0a1797cc97efbb':
PIPE-3004: Minor updates to improve readability of scan determination logic
PIPE-3004: Refactor FieldTable._read_table to optimize scan checks and reduce unnecessary computations -
Rui Xue <rx.astro@gmail.com> 7f44fe5b8df0412da26d172ccf0a1797cc97efbb m
PIPE-3004: Minor updates to improve readability of scan determination logic
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Luke Maud f13422f29445a6e51af26d2b34aef050f72452f3 m
PIPE-2932 change fraction flag limit to 0.5 and logics to equal and greater than
-
Rui Xue 30e1473dcb3773a1b02c07f4b222313243e30e1d m
PIPE-3004: Refactor FieldTable._read_table to optimize scan checks and reduce unnecessary computations
-
Rui Xue <rx.astro@gmail.com> b9ab438464dd42f47c0b3456c7a24fca7a28bb32 m
PIPE-1677: Refactor logging statements in `ImageParamsHeuristics` and `ImageParamsHeuristicsVlassQl`
-
Rui Xue <rx.astro@gmail.com> f036033eb1e92fd746c033492a0a59b5311c0130 m
PIPE-1677: Update `is_eph_obj` method in VLASS heuristics to include type hints and detailed docstrings
- pipeline/hif/heuristics/imageparams_base.py (version f036033eb1e92fd746c033492a0a59b5311c0130) (diffs)
- pipeline/hif/heuristics/imageparams_vlass_quick_look.py (version f036033eb1e92fd746c033492a0a59b5311c0130) (diffs)
- pipeline/hif/heuristics/imageparams_vlass_single_epoch_continuum.py (version f036033eb1e92fd746c033492a0a59b5311c0130) (diffs)
-
Shawn Booth 7e7c567325cfb66a6ec4fbef286b7e35453bd9d4 m
Pull request #1759: PIPE-2999: auto-cleanup of testing directory from almaimportdata_test.py
Merge in PIPE/pipeline from PIPE-2999-auto-cleanup-of-testing-directory-from-almaimportdata_test.py to main
* commit 'fe959666c96e7b94bd4e02784ba0eebbcdae8aad':
PIPE-2999: added fixture to prevent leftover directory after running recipe_converter_test.py
PIPE-2999: use pytest's tmp_path fixture to clean up temp directories -
Shawn Booth 571d3827104cc21a36f6d92209f12f04f557fd5b m
Pull request #1761: PIPE-2503: add small b2b / polcal tests in the regression test collections
Merge in PIPE/pipeline from PIPE-2503-add-small-b2b-polcal-tests-in-the-regression-test-collections to main
* commit '0b8a3cd5a9b16714a4faa3caf0d82e861a7ca4c3':
PIPE-2503: turned back on polcal and B2B regression tests; updated polcal test to use different dataset -
Shawn Booth fe959666c96e7b94bd4e02784ba0eebbcdae8aad m
PIPE-2999: added fixture to prevent leftover directory after running recipe_converter_test.py
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Kristin Berry 99b7229a29a2ecfad502e62ab58714b851191497 m
PIPE-2694 removed empty spaces
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Shawn Booth 84bbb0b3dd7e0e677537ac0c9a99f796ff390cc4 m
PIPE-2320: removed unused import and added _fdm_spws default to class definition
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Shawn Booth 8791506dff62feb3a95804c61117920eb1cd20e4 m
Pull request #1760: PIPE-1654: Add weblog rendering failure detection to regression tests
Merge in PIPE/pipeline from PIPE-1654-detect-weblog-rendering-failures-in-regression-tester to main
* commit '15b8691d7f4c9da10b6b7f69347c99aa17035891':
PIPE-1654: moved SIMULATE_WEBLOG_FAILURE logic into conftest.py to isolate from production code
PIPE-1654: add weblog rendering failure detection to regression tests -
Shawn Booth 15b8691d7f4c9da10b6b7f69347c99aa17035891 m
PIPE-1654: moved SIMULATE_WEBLOG_FAILURE logic into conftest.py to isolate from production code
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Shawn Booth 0b8a3cd5a9b16714a4faa3caf0d82e861a7ca4c3 m
PIPE-2503: turned back on polcal and B2B regression tests; updated polcal test to use different dataset
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Joshua Hoskins f19281330bc1d40bf73156de99a1467654704e7d m
Update type hint according to code review suggestion.
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Kristin Berry e4672d848e3dc731b02352f8516950a4c511cbc1 m
Pull request #1690: PIPE-2845: PIPE-2103 followup features and bugfixes
Merge in PIPE/pipeline from PIPE-2845-pipe-2103-followup-tasks to main
* commit '09431438bcf5ed154523ddbbb83606b401a4c005':
PIPE-2845: Clean up old comments and update failuretype for spw-wide failures
PIPE-2845: Fix issue with antenna-based failure reporting and plot on/off toggle.
PIPE-2845: Switch issue reporting from aggregated by spw to aggregated by spw and then ant.
PIPE-2845: Turn plotting off by default and only output skip spw message once per spw.
PIPE-2845: Update formatting to add more spaces.
PIPE-2845: Update atmosphere line fitting to map to fit frequencies directly, rather than relying on the frequencies in the spw array in case the fit is outside the array. Prevents an out of bounds error. -
Joshua Hoskins c977dc6a8cc0b3c60a7c47a3a503fba07561ab0e m
Update type hint according to code review suggestion.