Pipeline

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  Dirk Muders 07 Jul 2026 0199f3a67825f32f63d28bb09bfaae319dc182b1

  Pull request #1846: PIPE-3057 / PIPE-3053: Modify uvcontsub and IF imaging for new MS frames
  Merge in PIPE/pipeline from PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames to main
  
  * commit '5c610c885dd2b5760246f65f709426e49bce774f':
    PIPE-3003: Rolled back VLA flagging template name changes.
    PIPE-3003: Added new MS name extensions to sanitize method. Use actual MS name root to get default flagging task templates.
    PIPE-3057: Fixed contfilehandler test.
    PIPE-3003: Make `MstransformResults.output_data_type` optional for VLA compatibility
    PIPE-3057/PIPE-3053: Changed all "_topo" methods and variable names to "_ms_frame". Changed advisechansel calls to use the MS native frequency frame as desired frame to convert to.
    PIPE-3003: Removed duplicate lines.
    PIPE-3003: Changed 'cont+line' phrasing to 'transformed'.
    PIPE-3003: Fixed empty results return use case.
    PIPE-3003: Added ephemeris object handling code.
    PIPE-3003: Edited doc strings and log messages. Attempt to return more useful empty result (not yet working).
    PIPE-3003: Remove inputs parameters that CASA's mstransform does not understand.
    PIPE-3003: Added DataType.RAW to 'processing_data_types' to prepare for out-of-sequence call handling.
    PIPE-3003: Fixed bug (previous instead of new MS name) in creating '*.flagtargetstemplate.txt' files for new MSes in hif_mstransform and hif_uvcontsub.
    PIPE-3003: Implemented new hif_mstransform mode to create imaging MSes with re-gridding to the native frequency frame (SOURCE still to be excluded). Changed 'processing_data_type' to 'processing_data_types' in all pipeline tasks.
    PIPE-3003: Added new imaging datatypes.
    PIPE-2955: Consolidate parameter cleanup for unsupported inputs to `casatasks/mstransform`
    PIPE-2955: Add `per_spw` option to `hif_mstransform` for splitting MSes on each spectral window
• 

  Dirk Muders 06 Jul 2026 5c610c885dd2b5760246f65f709426e49bce774f m

  Merge branch 'PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames' of https://open-bitbucket.nrao.edu/scm/pipe/pipeline into PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames
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  Dirk Muders 06 Jul 2026 24896f9a345d22a094663e2f6491a7f0518a1964 m

  Merge remote-tracking branch 'origin/main' into PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames
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  Dirk Muders 03 Jul 2026 8170c0a79f794bc8a1a35842cd92799fc5489e14 m

  PIPE-3003: Rolled back VLA flagging template name changes.

  • pipeline/hifv/tasks/flagging/flagtargetsdata.py (version 8170c0a79f794bc8a1a35842cd92799fc5489e14) (diffs)
• 

  Dirk Muders 02 Jul 2026 433e041161529782c6e105baa2855adfc9969c79 m

  Merge remote-tracking branch 'origin/main' into PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames
• 

  Dirk Muders 02 Jul 2026 90db66902743413a05e9c6675aafc9c55f5420b3 m

  PIPE-3003: Added new MS name extensions to sanitize method. Use actual MS name root to get default flagging task templates.

  • pipeline/hifa/tasks/flagging/flagtargetsalma.py (version 90db66902743413a05e9c6675aafc9c55f5420b3) (diffs)
  • pipeline/hifv/tasks/flagging/flagtargetsdata.py (version 90db66902743413a05e9c6675aafc9c55f5420b3) (diffs)
  • pipeline/infrastructure/filenamer.py (version 90db66902743413a05e9c6675aafc9c55f5420b3) (diffs)
• 

  Dirk Muders 26 Jun 2026 f96aaf600a7c4b71d168412e650b829c022c945a m

  PIPE-3057: Fixed contfilehandler test.

  • pipeline/infrastructure/contfilehandler_test.py (version f96aaf600a7c4b71d168412e650b829c022c945a) (diffs)
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  Rui Xue 25 Jun 2026 77e56105fe4aa3d98971e2d8513ee71ef35291c5 m

  PIPE-3003: Make `MstransformResults.output_data_type` optional for VLA compatibility
  Fixes TypeError in VLA mstransform by adding default value (None) to
  output_data_type parameter in base class constructor.

  • pipeline/hif/tasks/mstransform/mstransform.py (version 77e56105fe4aa3d98971e2d8513ee71ef35291c5) (diffs)
  • pipeline/hifv/tasks/mstransform/mstransform.py (version 77e56105fe4aa3d98971e2d8513ee71ef35291c5) (diffs)
• 

  Dirk Muders 22 Jun 2026 1d84cc3bc4371186195c5eddda8e4b5f48d63c50 m

  Merge remote-tracking branch 'origin/main' into PIPE-3057_PIPE-3053_Modify_uvcontsub_and_IF_imaging_for_new_MS_frames
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  Dirk Muders 29 May 2026 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651 m

  PIPE-3057/PIPE-3053: Changed all "_topo" methods and variable names to "_ms_frame". Changed advisechansel calls to use the MS native frequency frame as desired frame to convert to.

  • pipeline/hif/heuristics/imageparams_base.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/heuristics/imageparams_vlass_single_epoch_continuum.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/tasks/makeimlist/cleantarget.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/tasks/tclean/tclean.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/tasks/uvcontsub/renderer.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/tasks/uvcontsub/uvcontsub.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/hif/templates/uvcontsub.mako (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/infrastructure/contfilehandler.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
  • pipeline/infrastructure/contfilehandler_test.py (version 4bb5f121b78a8dd6d77b7f8be3aaff61bd058651) (diffs)
• 

  Dirk Muders 15 May 2026 ab3127c68df4f8163703cf41161dc9fe29fa6c08 m

  PIPE-3003: Removed duplicate lines.

  • pipeline/hif/tasks/mstransform/mstransform.py (version ab3127c68df4f8163703cf41161dc9fe29fa6c08) (diffs)
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  Dirk Muders 05 May 2026 49e61c18fdad26871b77b7207a803fb239c194c2 m

  Merge remote-tracking branch 'origin/main' into PIPE-3003_mstransform_for_new_imaging_workflow
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  Dirk Muders 17 Apr 2026 01fef6b634dc6246d044c60d4351b41fe4e31b31 m

  PIPE-3003: Changed 'cont+line' phrasing to 'transformed'.

  • pipeline/hif/tasks/mstransform/mstransform.py (version 01fef6b634dc6246d044c60d4351b41fe4e31b31) (diffs)
  • pipeline/hif/tasks/mstransform/qa.py (version 01fef6b634dc6246d044c60d4351b41fe4e31b31) (diffs)
• 

  Dirk Muders 17 Apr 2026 eb307c28780c00106ad92d4f5d8c6deb82b2a69e m

  PIPE-3003: Fixed empty results return use case.

  • pipeline/hif/tasks/mstransform/mstransform.py (version eb307c28780c00106ad92d4f5d8c6deb82b2a69e) (diffs)
  • pipeline/hif/tasks/mstransform/renderer.py (version eb307c28780c00106ad92d4f5d8c6deb82b2a69e) (diffs)
  • pipeline/hif/templates/mstransform.mako (version eb307c28780c00106ad92d4f5d8c6deb82b2a69e) (diffs)
• 

  Dirk Muders 17 Apr 2026 16267f3d10528545e7337987ae9d19e6d7b8ad50 m

  Merge remote-tracking branch 'origin/main' into PIPE-3003_mstransform_for_new_imaging_workflow
• 

  Dirk Muders 14 Apr 2026 b6d772bd3e0fbfc3e8f8e670a701210b74d3f09c m

  PIPE-3003: Added ephemeris object handling code.

  • pipeline/hif/tasks/mstransform/mstransform.py (version b6d772bd3e0fbfc3e8f8e670a701210b74d3f09c) (diffs)
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  Dirk Muders 10 Apr 2026 f46eaa125022b717c3675f77e84bbd4b67b9fd89 m

  PIPE-3003: Edited doc strings and log messages. Attempt to return more useful empty result (not yet working).

  • pipeline/hif/tasks/mstransform/mstransform.py (version f46eaa125022b717c3675f77e84bbd4b67b9fd89) (diffs)
• 

  Dirk Muders 10 Apr 2026 56eabfa575555d6e819c4ee793ebf7ce26a6fb9a m

  PIPE-3003: Remove inputs parameters that CASA's mstransform does not understand.

  • pipeline/hif/tasks/mstransform/mstransform.py (version 56eabfa575555d6e819c4ee793ebf7ce26a6fb9a) (diffs)
• 

  Dirk Muders 10 Apr 2026 1bce1ca34e40109943000d6c0e1115f9feb71f8a m

  PIPE-3003: Added DataType.RAW to 'processing_data_types' to prepare for out-of-sequence call handling.

  • pipeline/hif/tasks/mstransform/mstransform.py (version 1bce1ca34e40109943000d6c0e1115f9feb71f8a) (diffs)
• 

  Dirk Muders 10 Apr 2026 10e6c8dbdac4bad017cc311246e0a7c12a4aab93 m

  PIPE-3003: Fixed bug (previous instead of new MS name) in creating '*.flagtargetstemplate.txt' files for new MSes in hif_mstransform and hif_uvcontsub.

  • pipeline/hif/tasks/mstransform/mstransform.py (version 10e6c8dbdac4bad017cc311246e0a7c12a4aab93) (diffs)
  • pipeline/hif/tasks/uvcontsub/uvcontsub.py (version 10e6c8dbdac4bad017cc311246e0a7c12a4aab93) (diffs)
• 

  Dirk Muders 10 Apr 2026 1a1adace0ec04d4174d03506ad22d17404036448 m

  PIPE-3003: Implemented new hif_mstransform mode to create imaging MSes with re-gridding to the native frequency frame (SOURCE still to be excluded). Changed 'processing_data_type' to 'processing_data_types' in all pipeline tasks.

  • pipeline/domain/datatype.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/h/tasks/exportdata/exportdata.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/cli/hif_mstransform.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/checkproductsize/checkproductsize.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/correctedampflag/correctedampflag.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/editimlist/editimlist.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/findcont/findcont.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/makecutoutimages/makecutoutimages.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/makeimages/makeimages.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/makeimlist/makeimlist.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/makermsimages/makermsimages.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/mstransform/mstransform.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/selfcal/selfcal.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/tclean/tclean.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/transformimagedata/transformimagedata.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hif/tasks/uvcontsub/uvcontsub.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifa/tasks/flagging/flagtargetsalma.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifa/tasks/imageprecheck/imageprecheck.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/exportvlassdata/exportvlassdata.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/flagging/checkflag.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/flagging/flagdetervla.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/flagging/flagtargetsdata.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/flagging/targetflag.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/pbcor/pbcor.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/plotsummary/plotsummary.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/selfcal/selfcal.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hifv/tasks/statwt/statwt.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/atmcor/atmcor.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/baseline.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/detection.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/maskline.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/simplegrid.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/validation.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baseline/worker.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baselineflag/baselineflag.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/baselineflag/worker.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/imaging/gridding.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/imaging/imaging.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/hsd/tasks/imaging/worker.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
  • pipeline/infrastructure/vdp.py (version 1a1adace0ec04d4174d03506ad22d17404036448) (diffs)
• 

  Dirk Muders 25 Mar 2026 24e452b1afcf6606f52216588a0c4781df17b556 m

  PIPE-3003: Added new imaging datatypes.

  • pipeline/domain/datatype.py (version 24e452b1afcf6606f52216588a0c4781df17b556) (diffs)
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  Dirk Muders 25 Mar 2026 e6f757aef621c8d89111533bae809ef2e8d0fc28 m

  Merge remote-tracking branch 'origin/main' into PIPE-3003_mstransform_for_new_imaging_workflow
• 

  Rui Xue 22 Feb 2026 a65831367c034182e27f48c7f99347052fc6095c m

  Merge remote-tracking branch 'origin/main' into mstransform-per-spw-parallel-split
• 

  Rui Xue 30 Jan 2026 17f6f52ccc7dba0f9d23f59bbb9b8cb6a59996b3 m

  PIPE-2955: Consolidate parameter cleanup for unsupported inputs to `casatasks/mstransform`

  • pipeline/hif/tasks/mstransform/mstransform.py (version 17f6f52ccc7dba0f9d23f59bbb9b8cb6a59996b3) (diffs)
  • pipeline/hifv/tasks/mstransform/mstransform.py (version 17f6f52ccc7dba0f9d23f59bbb9b8cb6a59996b3) (diffs)
• 

  Rui Xue 28 Jan 2026 1a1cf9eecd79b9968b59e768b95d5c3adab164a9 m

  PIPE-2955: Add `per_spw` option to `hif_mstransform` for splitting MSes on each spectral window

  • pipeline/hif/cli/hif_mstransform.py (version 1a1cf9eecd79b9968b59e768b95d5c3adab164a9) (diffs)
  • pipeline/hif/tasks/mstransform/mstransform.py (version 1a1cf9eecd79b9968b59e768b95d5c3adab164a9) (diffs)