Build: #7 failed

Job: Pipeline PR Test 6.6.6 failed

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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_topology_export_xml.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_set_proc_cpubind.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_distances_s.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/HWLOC_TOPOLOGY_DIFF_OBJ_ATTR.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_File_get_amode.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_Type_size.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_cuda_get_device_osdev.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_Attr_delete.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_Neighbor_allgather.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/HWLOC_CPUBIND_THREAD.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_obj_type_is_memory.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/HWLOC_DISTANCES_ADD_FLAG_GROUP_INACCURATE.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_distances_get_by_depth.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_topology_diff_load_xmlbuffer.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_Get.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_File_iread_all.3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_bitmap_to_ulong.3
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/dialog2.tcl
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/items.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/tclIndex
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ctext.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/clrpick.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/check.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/states.tcl
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18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/form.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/spin.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/hello
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/entry2.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ruler.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/entry1.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/rmt
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkscale.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/style.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/sayings.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/bind.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/tcolor
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/README
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/label.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/image2.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/anilabel.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/en.msg
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/twind.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/cscroll.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/radio.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttknote.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/goldberg.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/plot.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/icon.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/vscale.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/puzzle.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/toolbar.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ixset
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/textpeer.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/rolodex
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/paned2.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/combo.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/tree.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/msgbox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/filebox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/pendulum.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/fontchoose.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/text.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/menu.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/license.terms
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkbut.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/paned1.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/entry3.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/timer
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/unicodeout.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/labelframe.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/widget
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/search.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/nl.msg
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/browse
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/hscale.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkmenu.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/dialog1.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/aniwave.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/panedwindow.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/tk.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/msgbox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/dialog.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/button.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/winTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/sizegrip.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/defaults.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/vistaTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/utils.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/combobox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/xpTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scale.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/cursors.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/treeview.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/altTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/fonts.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/panedwindow.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/classicTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/aquaTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/notebook.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/menubutton.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/ttk.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/spinbox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/entry.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/progress.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/clamTheme.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scrollbar.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/text.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/bgerror.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/menu.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/spinbox.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/entry.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/optMenu.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/share/tk8.6/fontchooser.tcl
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/python3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/casaviewer
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/casa
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/pip3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/2to3
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/bin/mpicasa
18-Dec-2024 03:22:43 casa-6.6.6-7-py3.10.el8/.revstate
18-Dec-2024 03:22:43 0
18-Dec-2024 03:24:05 Executing: ['git', 'clone', 'https://open-bitbucket.nrao.edu/scm/pipe/pipeline.git']
18-Dec-2024 03:24:05 stderr: Cloning into 'pipeline'...
18-Dec-2024 03:24:05 0
18-Dec-2024 03:24:05 Executing: ['git', 'config', '--global', 'user.name', '"bamboo"']
18-Dec-2024 03:24:05 0
18-Dec-2024 03:24:05 Executing: ['git', 'config', '--global', 'user.email', '"bamboo_merge@.nrao.edu"']
18-Dec-2024 03:24:05 0
18-Dec-2024 03:24:05 Executing: ['git', 'checkout', 'main']
18-Dec-2024 03:24:05 stderr: Already on 'main'
18-Dec-2024 03:24:05 Your branch is up to date with 'origin/main'.
18-Dec-2024 03:24:05 0
18-Dec-2024 03:24:05 Executing: ['git', 'merge', 'origin/PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class']
18-Dec-2024 03:24:05 Auto-merging pipeline/hsd/tasks/baseline/baseline.py
18-Dec-2024 03:24:05 Merge made by the 'recursive' strategy.
18-Dec-2024 03:24:05 pipeline/__init__.py                            |  34 ++++-
18-Dec-2024 03:24:05 pipeline/h/tasks/exportdata/exportdata.py       |  29 +++-
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_applycal.py                |  46 +-----
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_atmcor.py                  |  49 +-----
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_baseline.py                | 130 +---------------
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_blflag.py                  |  63 +-------
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_exportdata.py              |  10 +-
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_flagdata.py                |  54 +------
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_imaging.py                 |  16 +-
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_importdata.py              |  59 +------
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_k2jycal.py                 |  55 +------
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_restoredata.py             |  47 +-----
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_skycal.py                  |  44 +-----
18-Dec-2024 03:24:05 pipeline/hsd/cli/hsd_tsysflag.py                |  50 +-----
18-Dec-2024 03:24:05 pipeline/hsd/tasks/applycal/applycal.py         |  65 ++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/atmcor/atmcor.py             |  71 +++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/baseline/baseline.py         | 195 +++++++++++++++++++-----
18-Dec-2024 03:24:05 pipeline/hsd/tasks/baselineflag/baselineflag.py | 141 ++++++++++++-----
18-Dec-2024 03:24:05 pipeline/hsd/tasks/flagging/flagdeteralmasd.py  | 132 +++++++++++-----
18-Dec-2024 03:24:05 pipeline/hsd/tasks/imaging/imaging.py           |  41 ++++-
18-Dec-2024 03:24:05 pipeline/hsd/tasks/importdata/importdata.py     | 110 +++++++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/k2jycal/k2jycal.py           |  83 ++++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/restoredata/restoredata.py   |  80 ++++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/skycal/skycal.py             |  88 +++++++++--
18-Dec-2024 03:24:05 pipeline/hsd/tasks/tsysflag/tsysflag.py         | 136 +++++++++++------
18-Dec-2024 03:24:05 pipeline/hsdn/cli/hsdn_exportdata.py            |  12 +-
18-Dec-2024 03:24:05 pipeline/hsdn/cli/hsdn_importdata.py            |  62 ++------
18-Dec-2024 03:24:05 pipeline/hsdn/cli/hsdn_restoredata.py           |  64 ++------
18-Dec-2024 03:24:05 pipeline/hsdn/tasks/importdata/importdata.py    |  55 ++++++-
18-Dec-2024 03:24:05 pipeline/hsdn/tasks/restoredata/restoredata.py  |  80 +++++++++-
18-Dec-2024 03:24:05 pipeline/infrastructure/basetask.py             |   6 +-
18-Dec-2024 03:24:05 pipeline/infrastructure/doctools.py             | 101 ++++++++++++
18-Dec-2024 03:24:05 requirements.txt                                |   1 +
18-Dec-2024 03:24:05 33 files changed, 1232 insertions(+), 977 deletions(-)
18-Dec-2024 03:24:05 create mode 100644 pipeline/infrastructure/doctools.py
18-Dec-2024 03:24:05 0
18-Dec-2024 03:24:05 casadir: casa-6.6.6-7-py3.10.el8
18-Dec-2024 03:24:05 fullpath: /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8
18-Dec-2024 03:24:05 {'HOSTNAME': '192e137b09bf', 'PWD': '/home/casatest/casa-build-utils/pipeline', 'HOME': '/home/casatest', 'SHLVL': '1', 'PATH': '/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8:/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin:/home/casatest/casa-build-utils/pipeline/workdir/pipeline:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin', 'OLDPWD': '/home/casatest', '_': '/usr/local/bin/python3.8', 'LC_CTYPE': 'C.UTF-8'}
18-Dec-2024 03:24:05 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '--extra-index-url=https://pypi.org/simple', '--disable-pip-version-check', '--use-pep517', '--upgrade-strategy=only-if-needed', 'numpy==1.23.5', '-r', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt']
18-Dec-2024 03:24:05 Looking in indexes: https://pypi.org/simple, https://pypi.org/simple
18-Dec-2024 03:24:05 Ignoring astropy: markers 'python_version < "3.10"' don't match your environment
18-Dec-2024 03:24:05 Ignoring bdsf: markers 'python_version < "3.10" or (sys_platform == "darwin" and platform_machine == "x86_64")' don't match your environment
18-Dec-2024 03:24:05 Collecting numpy==1.23.5
18-Dec-2024 03:24:05   Downloading numpy-1.23.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.1 MB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.1/17.1 MB 21.0 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Collecting csscompressor==0.9.5
18-Dec-2024 03:24:05   Downloading csscompressor-0.9.5.tar.gz (237 kB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 237.8/237.8 kB 8.4 MB/s eta 0:00:00
18-Dec-2024 03:24:05   Installing build dependencies: started
18-Dec-2024 03:24:05   Installing build dependencies: finished with status 'done'
18-Dec-2024 03:24:05   Getting requirements to build wheel: started
18-Dec-2024 03:24:05   Getting requirements to build wheel: finished with status 'done'
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): started
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:05 Collecting cachetools==5.3.1
18-Dec-2024 03:24:05   Downloading cachetools-5.3.1-py3-none-any.whl (9.3 kB)
18-Dec-2024 03:24:05 Collecting mako==1.2.4
18-Dec-2024 03:24:05   Downloading Mako-1.2.4-py3-none-any.whl (78 kB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 78.7/78.7 kB 1.5 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Collecting pypubsub==4.0.3
18-Dec-2024 03:24:05   Downloading Pypubsub-4.0.3-py3-none-any.whl (61 kB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 61.4/61.4 kB 1.7 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Collecting intervaltree==3.1.0
18-Dec-2024 03:24:05   Downloading intervaltree-3.1.0.tar.gz (32 kB)
18-Dec-2024 03:24:05   Installing build dependencies: started
18-Dec-2024 03:24:05   Installing build dependencies: finished with status 'done'
18-Dec-2024 03:24:05   Getting requirements to build wheel: started
18-Dec-2024 03:24:05   Getting requirements to build wheel: finished with status 'done'
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): started
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:05 Collecting logutils==0.3.5
18-Dec-2024 03:24:05   Downloading logutils-0.3.5.tar.gz (27 kB)
18-Dec-2024 03:24:05   Installing build dependencies: started
18-Dec-2024 03:24:05   Installing build dependencies: finished with status 'done'
18-Dec-2024 03:24:05   Getting requirements to build wheel: started
18-Dec-2024 03:24:05   Getting requirements to build wheel: finished with status 'done'
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): started
18-Dec-2024 03:24:05   Preparing metadata (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:05 Collecting ps_mem==3.14
18-Dec-2024 03:24:05   Downloading ps_mem-3.14-py2.py3-none-any.whl (19 kB)
18-Dec-2024 03:24:05 Collecting astropy==6.1.4
18-Dec-2024 03:24:05   Downloading astropy-6.1.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (10.0 MB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.0/10.0 MB 15.3 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Collecting docstring-inheritance
18-Dec-2024 03:24:05   Downloading docstring_inheritance-2.2.2-py3-none-any.whl (24 kB)
18-Dec-2024 03:24:05 Collecting MarkupSafe>=0.9.2
18-Dec-2024 03:24:05   Downloading MarkupSafe-3.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
18-Dec-2024 03:24:05 Collecting sortedcontainers<3.0,>=2.0
18-Dec-2024 03:24:05   Downloading sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
18-Dec-2024 03:24:05 Requirement already satisfied: pyerfa>=2.0.1.1 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (2.0.1.4)
18-Dec-2024 03:24:05 Collecting PyYAML>=3.13
18-Dec-2024 03:24:05   Downloading PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (751 kB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 751.2/751.2 kB 13.5 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Collecting astropy-iers-data>=0.2024.8.27.10.28.29
18-Dec-2024 03:24:05   Downloading astropy_iers_data-0.2024.12.16.0.35.48-py3-none-any.whl (1.9 MB)
18-Dec-2024 03:24:05      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 24.6 MB/s eta 0:00:00
18-Dec-2024 03:24:05 Requirement already satisfied: packaging>=19.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (24.1)
18-Dec-2024 03:24:05 Building wheels for collected packages: csscompressor, intervaltree, logutils
18-Dec-2024 03:24:05   Building wheel for csscompressor (pyproject.toml): started
18-Dec-2024 03:24:32   Building wheel for csscompressor (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:32   Created wheel for csscompressor: filename=csscompressor-0.9.5-py3-none-any.whl size=240333 sha256=3871ae77d0261602f35c1713b7d8a3ea762f15a4f09ee18dcbd0cb872c22e75f
18-Dec-2024 03:24:32   Stored in directory: /home/casatest/.cache/pip/wheels/74/75/00/e4b2f02c36016a6df23980e58d041705aa9bea376b1600d42f
18-Dec-2024 03:24:32   Building wheel for intervaltree (pyproject.toml): started
18-Dec-2024 03:24:32   Building wheel for intervaltree (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:32   Created wheel for intervaltree: filename=intervaltree-3.1.0-py2.py3-none-any.whl size=26097 sha256=8a5d9ef66646ef7526fa6fe60ceab74c563248ae80f18a7eb21cdbb87ace9a40
18-Dec-2024 03:24:32   Stored in directory: /home/casatest/.cache/pip/wheels/f1/52/97/0884d240db33fb0bbc0c2c9549ff13f6a81ec91bf0c1807615
18-Dec-2024 03:24:32   Building wheel for logutils (pyproject.toml): started
18-Dec-2024 03:24:32   Building wheel for logutils (pyproject.toml): finished with status 'done'
18-Dec-2024 03:24:32   Created wheel for logutils: filename=logutils-0.3.5-py3-none-any.whl size=19928 sha256=ccc52da5f00a51c23eb2558a68d243a01714b3110d3053d5239c04c6309a5f06
18-Dec-2024 03:24:32   Stored in directory: /home/casatest/.cache/pip/wheels/fa/b9/12/e139e8d532cc359011f4a8a9586ee962882e4a99d214262b67
18-Dec-2024 03:24:32 Successfully built csscompressor intervaltree logutils
18-Dec-2024 03:24:32 Installing collected packages: sortedcontainers, ps_mem, logutils, csscompressor, PyYAML, pypubsub, numpy, MarkupSafe, intervaltree, docstring-inheritance, cachetools, astropy-iers-data, mako, astropy
18-Dec-2024 03:24:32   Attempting uninstall: numpy
18-Dec-2024 03:24:32     Found existing installation: numpy 2.0.1
18-Dec-2024 03:24:32     Uninstalling numpy-2.0.1:
18-Dec-2024 03:24:32       Successfully uninstalled numpy-2.0.1
18-Dec-2024 03:24:32 Successfully installed MarkupSafe-3.0.2 PyYAML-6.0.2 astropy-6.1.4 astropy-iers-data-0.2024.12.16.0.35.48 cachetools-5.3.1 csscompressor-0.9.5 docstring-inheritance-2.2.2 intervaltree-3.1.0 logutils-0.3.5 mako-1.2.4 numpy-1.23.5 ps_mem-3.14 pypubsub-4.0.3 sortedcontainers-2.4.0
18-Dec-2024 03:24:32 0
18-Dec-2024 03:24:32 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '.']
18-Dec-2024 03:24:32 Processing /home/casatest/casa-build-utils/pipeline/workdir/pipeline
18-Dec-2024 03:24:32   Preparing metadata (setup.py): started
18-Dec-2024 03:24:32   Preparing metadata (setup.py): finished with status 'done'
18-Dec-2024 03:24:32 Installing collected packages: Pipeline
18-Dec-2024 03:24:32 stderr:   DEPRECATION: Pipeline is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559
18-Dec-2024 03:24:32   Running setup.py install for Pipeline: started
18-Dec-2024 03:24:32   Running setup.py install for Pipeline: finished with status 'done'
18-Dec-2024 03:24:32 Successfully installed Pipeline-0.0.dev0
18-Dec-2024 03:24:32 stderr:
18-Dec-2024 03:24:32 stderr: [notice] A new release of pip available: 22.3.1 -> 24.3.1
18-Dec-2024 03:24:32 stderr: [notice] To update, run: pip install --upgrade pip
18-Dec-2024 03:24:32 0
18-Dec-2024 03:24:32 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/python3', '-m', 'pytest', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline', '--junitxml=/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml']
18-Dec-2024 03:24:32 stderr:
18-Dec-2024 03:24:32 stderr: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
18-Dec-2024 03:24:32 stderr:
18-Dec-2024 03:24:32 stderr: Warning: measurespath must exist as a directory and it must be owned by the user.
18-Dec-2024 03:24:32 stderr: Warning: no auto update is possible on this measurespath by this user.
18-Dec-2024 03:24:32 stderr:
18-Dec-2024 03:24:32 stderr: The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
18-Dec-2024 03:24:32 stderr: The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
18-Dec-2024 03:24:32 stderr: visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
18-Dec-2024 03:24:32 stderr:
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        Warning: measurespath must exist as a directory and it must be owned by the user.
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        Warning: no auto update is possible on this measurespath by this user.
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
18-Dec-2024 03:24:32 stderr: 2024-12-18 08:24:32        SEVERE        ::casa        
18-Dec-2024 03:24:32 stderr: ImportError while loading conftest '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/conftest.py'.
18-Dec-2024 03:24:32 stderr: conftest.py:8: in <module>
18-Dec-2024 03:24:32 stderr:     from casatasks import casalog
18-Dec-2024 03:24:32 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatasks/__init__.py:5: in <module>
18-Dec-2024 03:24:32 stderr:     from casatools import logsink as _logsink
18-Dec-2024 03:24:32 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:257: in <module>
18-Dec-2024 03:24:32 stderr:     raise config_except
18-Dec-2024 03:24:32 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:116: in <module>
18-Dec-2024 03:24:32 stderr:     do_auto_updates(config, logger)
18-Dec-2024 03:24:32 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/do_auto_updates.py:73: in do_auto_updates
18-Dec-2024 03:24:32 stderr:     data_update(configDict.measurespath, logger=logger, auto_update_rules=True, verbose=verbose)
18-Dec-2024 03:24:32 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/data_update.py:158: in data_update
18-Dec-2024 03:24:32 stderr:     raise AutoUpdatesNotAllowed("data_update: path must exist as a directory and it must be owned by the user, path = %s" % path)
18-Dec-2024 03:24:32 stderr: E   casaconfig.private.CasaconfigErrors.AutoUpdatesNotAllowed: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
18-Dec-2024 03:24:32 measures data is not available
18-Dec-2024 03:24:32 4
18-Dec-2024 03:24:32 mkdir: cannot create directory 'workdir': File exists
18-Dec-2024 03:24:32 cp: cannot stat '/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml': No such file or directory
18-Dec-2024 03:24:33 chown: cannot access '/pkgout/*': No such file or directory
18-Dec-2024 03:24:33 Failing task since return code of [/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT937-PPT666-7-ScriptBuildTask-2995766506948709812.sh] was 1 while expected 0
18-Dec-2024 03:24:33 Finished task 'Test' with result: Failed
18-Dec-2024 03:24:33 Starting task 'Cleanup' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
18-Dec-2024 03:24:33
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class - Pipeline PR Test 6.6.6 #7 (PIPE-PPRT937-PPT666-7)'
... running command line:
/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT937-PPT666-7-ScriptBuildTask-4591680424890340339.sh
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT937-PPT666
18-Dec-2024 03:24:33 Starting cleanup
18-Dec-2024 03:24:33 Error response from daemon: No such container: pipeline-test
18-Dec-2024 03:24:33 Error response from daemon: No such container: pipeline-test
18-Dec-2024 03:24:33 Cleanup complete
18-Dec-2024 03:24:33 Finished task 'Cleanup' with result: Success
18-Dec-2024 03:24:33 Running post build plugin 'Docker Container Cleanup'
18-Dec-2024 03:24:33
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class - Pipeline PR Test 6.6.6 #7 (PIPE-PPRT937-PPT666-7)'
... running command line:
/usr/bin/docker rm -f pipelinetest
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT937-PPT666
18-Dec-2024 03:24:47 pipelinetest
18-Dec-2024 03:24:47 Running post build plugin 'NCover Results Collector'
18-Dec-2024 03:24:47 Running post build plugin 'Build Results Label Collector'
18-Dec-2024 03:24:47 Running post build plugin 'Clover Results Collector'
18-Dec-2024 03:24:47 Running post build plugin 'npm Cache Cleanup'
18-Dec-2024 03:24:47 Running post build plugin 'Artifact Copier'
18-Dec-2024 03:24:47 Publishing an artifact: Result xml
18-Dec-2024 03:24:47 Failing as no matching files has been found and empty artifacts are not allowed.
18-Dec-2024 03:24:47 Unable to publish artifact [Result xml]:
18-Dec-2024 03:24:47 The artifact is required, build will now fail.
18-Dec-2024 03:24:47 The artifact hasn't been successfully published after 89.86 ms
18-Dec-2024 03:24:47 Finalising the build...
18-Dec-2024 03:24:47 Stopping timer.
18-Dec-2024 03:24:47 Build PIPE-PPRT937-PPT666-7 completed.
18-Dec-2024 03:24:47 Running on server: post build plugin 'Build Hanging Detection Configuration'
18-Dec-2024 03:24:47 Running on server: post build plugin 'NCover Results Collector'
18-Dec-2024 03:24:47 Running on server: post build plugin 'Build Labeller'
18-Dec-2024 03:24:47 Running on server: post build plugin 'Clover Delta Calculator'
18-Dec-2024 03:24:47 Running on server: post build plugin 'Maven Dependencies Postprocessor'
18-Dec-2024 03:24:47 All post build plugins have finished
18-Dec-2024 03:24:47 Generating build results summary...
18-Dec-2024 03:24:47 Saving build results to disk...
18-Dec-2024 03:24:47 Store variable context...
18-Dec-2024 03:24:47 Finished building PIPE-PPRT937-PPT666-7.