Build: #6 failed

Job: Pipeline PR Test 6.6.6 failed

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  1. Default Stage

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17-Dec-2024 03:49:32 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_get_type_or_above_depth.3
17-Dec-2024 03:49:32 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/MPI_File_open.3
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17-Dec-2024 03:49:32 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/hwloc_topology_refresh.3
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/images/
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/images/earth.gif
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/images/flagup.xbm
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/clrpick.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/check.tcl
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/form.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/spin.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/hello
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ruler.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/entry1.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/rmt
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkscale.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/style.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/sayings.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/bind.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/tcolor
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/README
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/label.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/image2.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/anilabel.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/en.msg
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/twind.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/cscroll.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/radio.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttknote.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/goldberg.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/plot.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/icon.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/vscale.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/puzzle.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/toolbar.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ixset
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/rolodex
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/paned2.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/combo.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/tree.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/msgbox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/filebox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/pendulum.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/fontchoose.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/text.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/menu.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/license.terms
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkbut.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/paned1.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/entry3.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/timer
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17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/labelframe.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/widget
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/search.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/nl.msg
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/browse
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/hscale.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/ttkmenu.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/dialog1.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/demos/aniwave.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/panedwindow.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/tk.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/msgbox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/dialog.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/button.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/winTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/sizegrip.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/defaults.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/vistaTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/utils.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/combobox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/xpTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scale.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/cursors.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/treeview.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/altTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/fonts.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/panedwindow.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/classicTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/aquaTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/notebook.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/menubutton.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/ttk.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/spinbox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/entry.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/progress.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/clamTheme.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scrollbar.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/text.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/bgerror.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/menu.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/spinbox.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/entry.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/optMenu.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/share/tk8.6/fontchooser.tcl
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/python3
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/casaviewer
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/casa
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/pip3
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/2to3
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/bin/mpicasa
17-Dec-2024 03:49:45 casa-6.6.6-7-py3.10.el8/.revstate
17-Dec-2024 03:49:45 0
17-Dec-2024 03:51:01 Executing: ['git', 'clone', 'https://open-bitbucket.nrao.edu/scm/pipe/pipeline.git']
17-Dec-2024 03:51:01 stderr: Cloning into 'pipeline'...
17-Dec-2024 03:51:01 0
17-Dec-2024 03:51:01 Executing: ['git', 'config', '--global', 'user.name', '"bamboo"']
17-Dec-2024 03:51:01 0
17-Dec-2024 03:51:01 Executing: ['git', 'config', '--global', 'user.email', '"bamboo_merge@.nrao.edu"']
17-Dec-2024 03:51:01 0
17-Dec-2024 03:51:01 Executing: ['git', 'checkout', 'main']
17-Dec-2024 03:51:01 stderr: Already on 'main'
17-Dec-2024 03:51:01 Your branch is up to date with 'origin/main'.
17-Dec-2024 03:51:01 0
17-Dec-2024 03:51:01 Executing: ['git', 'merge', 'origin/PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class']
17-Dec-2024 03:51:01 Auto-merging pipeline/hsd/tasks/baseline/baseline.py
17-Dec-2024 03:51:01 Merge made by the 'recursive' strategy.
17-Dec-2024 03:51:01 pipeline/__init__.py                            |  34 ++++-
17-Dec-2024 03:51:01 pipeline/hsd/cli/hsd_applycal.py                |  46 +-----
17-Dec-2024 03:51:01 pipeline/hsd/cli/hsd_atmcor.py                  |  49 +-----
17-Dec-2024 03:51:01 pipeline/hsd/cli/hsd_baseline.py                | 130 +---------------
17-Dec-2024 03:51:01 pipeline/hsd/cli/hsd_blflag.py                  |  63 +-------
17-Dec-2024 03:51:01 pipeline/hsd/tasks/applycal/applycal.py         |  65 ++++++--
17-Dec-2024 03:51:01 pipeline/hsd/tasks/atmcor/atmcor.py             |  71 +++++++--
17-Dec-2024 03:51:01 pipeline/hsd/tasks/baseline/baseline.py         | 195 +++++++++++++++++++-----
17-Dec-2024 03:51:01 pipeline/hsd/tasks/baselineflag/baselineflag.py | 141 ++++++++++++-----
17-Dec-2024 03:51:01 pipeline/infrastructure/basetask.py             |   6 +-
17-Dec-2024 03:51:01 pipeline/infrastructure/doctools.py             | 101 ++++++++++++
17-Dec-2024 03:51:01 requirements.txt                                |   1 +
17-Dec-2024 03:51:01 12 files changed, 523 insertions(+), 379 deletions(-)
17-Dec-2024 03:51:01 create mode 100644 pipeline/infrastructure/doctools.py
17-Dec-2024 03:51:01 0
17-Dec-2024 03:51:01 casadir: casa-6.6.6-7-py3.10.el8
17-Dec-2024 03:51:01 fullpath: /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8
17-Dec-2024 03:51:01 {'HOSTNAME': 'de5eae497f94', 'PWD': '/home/casatest/casa-build-utils/pipeline', 'HOME': '/home/casatest', 'SHLVL': '1', 'PATH': '/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8:/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin:/home/casatest/casa-build-utils/pipeline/workdir/pipeline:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin', 'OLDPWD': '/home/casatest', '_': '/usr/local/bin/python3.8', 'LC_CTYPE': 'C.UTF-8'}
17-Dec-2024 03:51:01 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '--extra-index-url=https://pypi.org/simple', '--disable-pip-version-check', '--use-pep517', '--upgrade-strategy=only-if-needed', 'numpy==1.23.5', '-r', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt']
17-Dec-2024 03:51:01 Looking in indexes: https://pypi.org/simple, https://pypi.org/simple
17-Dec-2024 03:51:01 Ignoring astropy: markers 'python_version < "3.10"' don't match your environment
17-Dec-2024 03:51:01 Ignoring bdsf: markers 'python_version < "3.10" or (sys_platform == "darwin" and platform_machine == "x86_64")' don't match your environment
17-Dec-2024 03:51:01 Collecting numpy==1.23.5
17-Dec-2024 03:51:01   Downloading numpy-1.23.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.1 MB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.1/17.1 MB ? eta 0:00:00
17-Dec-2024 03:51:01 Collecting csscompressor==0.9.5
17-Dec-2024 03:51:01   Downloading csscompressor-0.9.5.tar.gz (237 kB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 237.8/237.8 kB 17.1 MB/s eta 0:00:00
17-Dec-2024 03:51:01   Installing build dependencies: started
17-Dec-2024 03:51:01   Installing build dependencies: finished with status 'done'
17-Dec-2024 03:51:01   Getting requirements to build wheel: started
17-Dec-2024 03:51:01   Getting requirements to build wheel: finished with status 'done'
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): started
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01 Collecting cachetools==5.3.1
17-Dec-2024 03:51:01   Downloading cachetools-5.3.1-py3-none-any.whl (9.3 kB)
17-Dec-2024 03:51:01 Collecting mako==1.2.4
17-Dec-2024 03:51:01   Downloading Mako-1.2.4-py3-none-any.whl (78 kB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 78.7/78.7 kB 3.5 MB/s eta 0:00:00
17-Dec-2024 03:51:01 Collecting pypubsub==4.0.3
17-Dec-2024 03:51:01   Downloading Pypubsub-4.0.3-py3-none-any.whl (61 kB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 61.4/61.4 kB 3.5 MB/s eta 0:00:00
17-Dec-2024 03:51:01 Collecting intervaltree==3.1.0
17-Dec-2024 03:51:01   Downloading intervaltree-3.1.0.tar.gz (32 kB)
17-Dec-2024 03:51:01   Installing build dependencies: started
17-Dec-2024 03:51:01   Installing build dependencies: finished with status 'done'
17-Dec-2024 03:51:01   Getting requirements to build wheel: started
17-Dec-2024 03:51:01   Getting requirements to build wheel: finished with status 'done'
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): started
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01 Collecting logutils==0.3.5
17-Dec-2024 03:51:01   Downloading logutils-0.3.5.tar.gz (27 kB)
17-Dec-2024 03:51:01   Installing build dependencies: started
17-Dec-2024 03:51:01   Installing build dependencies: finished with status 'done'
17-Dec-2024 03:51:01   Getting requirements to build wheel: started
17-Dec-2024 03:51:01   Getting requirements to build wheel: finished with status 'done'
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): started
17-Dec-2024 03:51:01   Preparing metadata (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01 Collecting ps_mem==3.14
17-Dec-2024 03:51:01   Downloading ps_mem-3.14-py2.py3-none-any.whl (19 kB)
17-Dec-2024 03:51:01 Collecting astropy==6.1.4
17-Dec-2024 03:51:01   Downloading astropy-6.1.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (10.0 MB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.0/10.0 MB 28.1 MB/s eta 0:00:00
17-Dec-2024 03:51:01 Collecting docstring-inheritance
17-Dec-2024 03:51:01   Downloading docstring_inheritance-2.2.2-py3-none-any.whl (24 kB)
17-Dec-2024 03:51:01 Collecting MarkupSafe>=0.9.2
17-Dec-2024 03:51:01   Downloading MarkupSafe-3.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
17-Dec-2024 03:51:01 Collecting sortedcontainers<3.0,>=2.0
17-Dec-2024 03:51:01   Downloading sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
17-Dec-2024 03:51:01 Collecting PyYAML>=3.13
17-Dec-2024 03:51:01   Downloading PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (751 kB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 751.2/751.2 kB 18.2 MB/s eta 0:00:00
17-Dec-2024 03:51:01 Requirement already satisfied: packaging>=19.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (24.1)
17-Dec-2024 03:51:01 Collecting astropy-iers-data>=0.2024.8.27.10.28.29
17-Dec-2024 03:51:01   Downloading astropy_iers_data-0.2024.12.16.0.35.48-py3-none-any.whl (1.9 MB)
17-Dec-2024 03:51:01      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 20.5 MB/s eta 0:00:00
17-Dec-2024 03:51:01 Requirement already satisfied: pyerfa>=2.0.1.1 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (2.0.1.4)
17-Dec-2024 03:51:01 Building wheels for collected packages: csscompressor, intervaltree, logutils
17-Dec-2024 03:51:01   Building wheel for csscompressor (pyproject.toml): started
17-Dec-2024 03:51:01   Building wheel for csscompressor (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01   Created wheel for csscompressor: filename=csscompressor-0.9.5-py3-none-any.whl size=240333 sha256=921972cb354bb21d13520da01c78485177b8d327e66b7e76846ce93a35927ee8
17-Dec-2024 03:51:01   Stored in directory: /home/casatest/.cache/pip/wheels/74/75/00/e4b2f02c36016a6df23980e58d041705aa9bea376b1600d42f
17-Dec-2024 03:51:01   Building wheel for intervaltree (pyproject.toml): started
17-Dec-2024 03:51:01   Building wheel for intervaltree (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01   Created wheel for intervaltree: filename=intervaltree-3.1.0-py2.py3-none-any.whl size=26097 sha256=1ee4f519650e4fda03a00361905e30364530923e00d93c86100c940531bd5d12
17-Dec-2024 03:51:01   Stored in directory: /home/casatest/.cache/pip/wheels/f1/52/97/0884d240db33fb0bbc0c2c9549ff13f6a81ec91bf0c1807615
17-Dec-2024 03:51:01   Building wheel for logutils (pyproject.toml): started
17-Dec-2024 03:51:01   Building wheel for logutils (pyproject.toml): finished with status 'done'
17-Dec-2024 03:51:01   Created wheel for logutils: filename=logutils-0.3.5-py3-none-any.whl size=19928 sha256=1fe328c9bba6be8bf7534989e9b3a665d24961b4b7cd67d8c221dc49ac683be5
17-Dec-2024 03:51:01   Stored in directory: /home/casatest/.cache/pip/wheels/fa/b9/12/e139e8d532cc359011f4a8a9586ee962882e4a99d214262b67
17-Dec-2024 03:51:01 Successfully built csscompressor intervaltree logutils
17-Dec-2024 03:51:28 Installing collected packages: sortedcontainers, ps_mem, logutils, csscompressor, PyYAML, pypubsub, numpy, MarkupSafe, intervaltree, docstring-inheritance, cachetools, astropy-iers-data, mako, astropy
17-Dec-2024 03:51:28   Attempting uninstall: numpy
17-Dec-2024 03:51:28     Found existing installation: numpy 2.0.1
17-Dec-2024 03:51:28     Uninstalling numpy-2.0.1:
17-Dec-2024 03:51:28       Successfully uninstalled numpy-2.0.1
17-Dec-2024 03:51:28 Successfully installed MarkupSafe-3.0.2 PyYAML-6.0.2 astropy-6.1.4 astropy-iers-data-0.2024.12.16.0.35.48 cachetools-5.3.1 csscompressor-0.9.5 docstring-inheritance-2.2.2 intervaltree-3.1.0 logutils-0.3.5 mako-1.2.4 numpy-1.23.5 ps_mem-3.14 pypubsub-4.0.3 sortedcontainers-2.4.0
17-Dec-2024 03:51:28 0
17-Dec-2024 03:51:28 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '.']
17-Dec-2024 03:51:28 Processing /home/casatest/casa-build-utils/pipeline/workdir/pipeline
17-Dec-2024 03:51:28   Preparing metadata (setup.py): started
17-Dec-2024 03:51:28   Preparing metadata (setup.py): finished with status 'done'
17-Dec-2024 03:51:28 Installing collected packages: Pipeline
17-Dec-2024 03:51:28 stderr:   DEPRECATION: Pipeline is being installed using the legacy 'setup.py install' method, because it does not have a 'pyproject.toml' and the 'wheel' package is not installed. pip 23.1 will enforce this behaviour change. A possible replacement is to enable the '--use-pep517' option. Discussion can be found at https://github.com/pypa/pip/issues/8559
17-Dec-2024 03:51:28   Running setup.py install for Pipeline: started
17-Dec-2024 03:51:28   Running setup.py install for Pipeline: finished with status 'done'
17-Dec-2024 03:51:28 Successfully installed Pipeline-0.0.dev0
17-Dec-2024 03:51:28 stderr:
17-Dec-2024 03:51:28 stderr: [notice] A new release of pip available: 22.3.1 -> 24.3.1
17-Dec-2024 03:51:28 stderr: [notice] To update, run: pip install --upgrade pip
17-Dec-2024 03:51:28 0
17-Dec-2024 03:51:28 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/python3', '-m', 'pytest', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline', '--junitxml=/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml']
17-Dec-2024 03:51:28 stderr:
17-Dec-2024 03:51:28 stderr: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
17-Dec-2024 03:51:28 stderr:
17-Dec-2024 03:51:28 stderr: Warning: measurespath must exist as a directory and it must be owned by the user.
17-Dec-2024 03:51:28 stderr: Warning: no auto update is possible on this measurespath by this user.
17-Dec-2024 03:51:28 stderr:
17-Dec-2024 03:51:28 stderr: The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
17-Dec-2024 03:51:28 stderr: The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
17-Dec-2024 03:51:28 stderr: visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
17-Dec-2024 03:51:28 stderr:
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        Warning: measurespath must exist as a directory and it must be owned by the user.
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        Warning: no auto update is possible on this measurespath by this user.
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
17-Dec-2024 03:51:28 stderr: 2024-12-17 08:51:28        SEVERE        ::casa        
17-Dec-2024 03:51:28 stderr: ImportError while loading conftest '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/conftest.py'.
17-Dec-2024 03:51:28 stderr: conftest.py:8: in <module>
17-Dec-2024 03:51:28 stderr:     from casatasks import casalog
17-Dec-2024 03:51:28 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatasks/__init__.py:5: in <module>
17-Dec-2024 03:51:28 stderr:     from casatools import logsink as _logsink
17-Dec-2024 03:51:28 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:257: in <module>
17-Dec-2024 03:51:28 stderr:     raise config_except
17-Dec-2024 03:51:28 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:116: in <module>
17-Dec-2024 03:51:28 stderr:     do_auto_updates(config, logger)
17-Dec-2024 03:51:28 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/do_auto_updates.py:73: in do_auto_updates
17-Dec-2024 03:51:28 stderr:     data_update(configDict.measurespath, logger=logger, auto_update_rules=True, verbose=verbose)
17-Dec-2024 03:51:28 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/data_update.py:158: in data_update
17-Dec-2024 03:51:28 stderr:     raise AutoUpdatesNotAllowed("data_update: path must exist as a directory and it must be owned by the user, path = %s" % path)
17-Dec-2024 03:51:28 stderr: E   casaconfig.private.CasaconfigErrors.AutoUpdatesNotAllowed: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
17-Dec-2024 03:51:28 measures data is not available
17-Dec-2024 03:51:28 4
17-Dec-2024 03:51:28 mkdir: cannot create directory 'workdir': File exists
17-Dec-2024 03:51:28 cp: cannot stat '/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml': No such file or directory
17-Dec-2024 03:51:28 chown: cannot access '/pkgout/*': No such file or directory
17-Dec-2024 03:51:28 Failing task since return code of [/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT937-PPT666-6-ScriptBuildTask-5970612776256701569.sh] was 1 while expected 0
17-Dec-2024 03:51:28 Finished task 'Test' with result: Failed
17-Dec-2024 03:51:28 Starting task 'Cleanup' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
17-Dec-2024 03:51:28
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class - Pipeline PR Test 6.6.6 #6 (PIPE-PPRT937-PPT666-6)'
... running command line:
/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT937-PPT666-6-ScriptBuildTask-1164748724682783027.sh
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT937-PPT666
17-Dec-2024 03:51:28 Starting cleanup
17-Dec-2024 03:51:28 Error response from daemon: No such container: pipeline-test
17-Dec-2024 03:51:29 Error response from daemon: No such container: pipeline-test
17-Dec-2024 03:51:29 Cleanup complete
17-Dec-2024 03:51:29 Finished task 'Cleanup' with result: Success
17-Dec-2024 03:51:29 Running post build plugin 'Docker Container Cleanup'
17-Dec-2024 03:51:29
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-2385-inheritance-of-docstrings-and-type-hints-cli-tasks-and-constructor-of-inputs-class - Pipeline PR Test 6.6.6 #6 (PIPE-PPRT937-PPT666-6)'
... running command line:
/usr/bin/docker rm -f pipelinetest
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT937-PPT666
17-Dec-2024 03:51:44 pipelinetest
17-Dec-2024 03:51:44 Running post build plugin 'NCover Results Collector'
17-Dec-2024 03:51:44 Running post build plugin 'Build Results Label Collector'
17-Dec-2024 03:51:44 Running post build plugin 'Clover Results Collector'
17-Dec-2024 03:51:44 Running post build plugin 'npm Cache Cleanup'
17-Dec-2024 03:51:44 Running post build plugin 'Artifact Copier'
17-Dec-2024 03:51:44 Publishing an artifact: Result xml
17-Dec-2024 03:51:44 Failing as no matching files has been found and empty artifacts are not allowed.
17-Dec-2024 03:51:44 Unable to publish artifact [Result xml]:
17-Dec-2024 03:51:44 The artifact is required, build will now fail.
17-Dec-2024 03:51:44 The artifact hasn't been successfully published after 61.45 ms
17-Dec-2024 03:51:44 Finalising the build...
17-Dec-2024 03:51:44 Stopping timer.
17-Dec-2024 03:51:44 Build PIPE-PPRT937-PPT666-6 completed.
17-Dec-2024 03:51:44 Running on server: post build plugin 'Build Hanging Detection Configuration'
17-Dec-2024 03:51:44 Running on server: post build plugin 'NCover Results Collector'
17-Dec-2024 03:51:44 Running on server: post build plugin 'Build Labeller'
17-Dec-2024 03:51:44 Running on server: post build plugin 'Clover Delta Calculator'
17-Dec-2024 03:51:44 Running on server: post build plugin 'Maven Dependencies Postprocessor'
17-Dec-2024 03:51:44 All post build plugins have finished
17-Dec-2024 03:51:44 Generating build results summary...
17-Dec-2024 03:51:44 Saving build results to disk...
17-Dec-2024 03:51:44 Store variable context...
17-Dec-2024 03:51:44 Finished building PIPE-PPRT937-PPT666-6.