Build: #62 failed

Job: Pipeline PR Test 6.6.6 failed

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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/lib/mpi/man/man3/HWLOC_OBJ_BRIDGE_HOST.3
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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/tk.tcl
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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/utils.tcl
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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/xpTheme.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scale.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/cursors.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/treeview.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/altTheme.tcl
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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/notebook.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/menubutton.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/ttk.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/spinbox.tcl
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14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/progress.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/clamTheme.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/ttk/scrollbar.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/text.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/bgerror.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/menu.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/spinbox.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/entry.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/optMenu.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/share/tk8.6/fontchooser.tcl
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/python3
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/casaviewer
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/casa
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/pip3
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/2to3
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/bin/mpicasa
14-Dec-2024 12:01:54 casa-6.6.6-7-py3.10.el8/.revstate
14-Dec-2024 12:01:54 0
14-Dec-2024 12:02:21 Executing: ['git', 'clone', 'https://open-bitbucket.nrao.edu/scm/pipe/pipeline.git']
14-Dec-2024 12:02:21 stderr: Cloning into 'pipeline'...
14-Dec-2024 12:02:21 0
14-Dec-2024 12:02:21 Executing: ['git', 'config', '--global', 'user.name', '"bamboo"']
14-Dec-2024 12:02:21 0
14-Dec-2024 12:02:21 Executing: ['git', 'config', '--global', 'user.email', '"bamboo_merge@.nrao.edu"']
14-Dec-2024 12:02:21 0
14-Dec-2024 12:02:21 Executing: ['git', 'checkout', 'main']
14-Dec-2024 12:02:21 stderr: Already on 'main'
14-Dec-2024 12:02:21 Your branch is up to date with 'origin/main'.
14-Dec-2024 12:02:21 0
14-Dec-2024 12:02:21 Executing: ['git', 'merge', 'origin/PIPE-1669-run-dev-pipeline-with-modular-casa6']
14-Dec-2024 12:02:21 Updating e7c2d2fcb..0d02c86a2
14-Dec-2024 12:02:21 Fast-forward
14-Dec-2024 12:02:21 .github/workflows/sphinx.yml                       |    62 +
14-Dec-2024 12:02:21 .gitignore                                         |     7 +-
14-Dec-2024 12:02:21 closure-compiler.jar                               |   Bin 8071796 -> 0 bytes
14-Dec-2024 12:02:21 conftest.py                                        |     2 +-
14-Dec-2024 12:02:21 docs/Makefile                                      |    11 +-
14-Dec-2024 12:02:21 docs/README.md                                     |    21 -
14-Dec-2024 12:02:21 docs/README.rst                                    |    35 +
14-Dec-2024 12:02:21 docs/pipeline_docs.yaml                            |    78 -
14-Dec-2024 12:02:21 docs/source/_static/custom_theme.css               |    37 +-
14-Dec-2024 12:02:21 docs/source/_templates/custom-class-template.rst   |    34 +
14-Dec-2024 12:02:21 docs/source/_templates/custom-module-template.rst  |    66 +
14-Dec-2024 12:02:21 docs/source/apisummary.rst                         |   185 +
14-Dec-2024 12:02:21 docs/source/conf.py                                |   220 +-
14-Dec-2024 12:02:21 docs/source/dependencies.rst                       |   107 +
14-Dec-2024 12:02:21 docs/source/develdocmd/building_the_pipeline.md    |   145 +-
14-Dec-2024 12:02:21 docs/source/develdocmd/old_releases.md             |    37 +
14-Dec-2024 12:02:21 docs/source/develdocmd/pipeline_tests.md           |    95 +-
14-Dec-2024 12:02:21 docs/source/develdocmd/recipes.md                  |    42 +
14-Dec-2024 12:02:21 docs/source/examples/test1.ipynb                   |   486 +
14-Dec-2024 12:02:21 .../installation.rst => examples/test2.rst}        |     2 +-
14-Dec-2024 12:02:21 docs/source/index.rst                              |    63 +-
14-Dec-2024 12:02:21 docs/source/latex.rst                              |    20 +-
14-Dec-2024 12:02:21 docs/source/modular.rst                            |   249 +
14-Dec-2024 12:02:21 docs/source/notebooks/context.ipynb                | 11212 +++++++++++++++++++
14-Dec-2024 12:02:21 docs/source/notebooks/tier0dask.ipynb              |  8178 ++++++++++++++
14-Dec-2024 12:02:21 docs/source/pipeline_tasks/pipeline_tasks.rst      |    10 -
14-Dec-2024 12:02:21 docs/source/references/pipeline.bib                |   366 +-
14-Dec-2024 12:02:21 docs/source/releases.rst                           |   206 +
14-Dec-2024 12:02:21 pipe1669.yaml                                      |    32 +
14-Dec-2024 12:02:21 pipeline/__init__.py                               |    48 +-
14-Dec-2024 12:02:21 pipeline/__main__.py                               |   359 +
14-Dec-2024 12:02:21 pipeline/config.py                                 |    41 +
14-Dec-2024 12:02:21 pipeline/domain/antenna.py                         |    77 +-
14-Dec-2024 12:02:21 pipeline/domain/antennaarray.py                    |   131 +-
14-Dec-2024 12:02:21 pipeline/domain/datadescription.py                 |    68 +-
14-Dec-2024 12:02:21 pipeline/domain/datatype.py                        |    21 +-
14-Dec-2024 12:02:21 pipeline/domain/field.py                           |    95 +-
14-Dec-2024 12:02:21 pipeline/domain/fluxmeasurement.py                 |    92 +-
14-Dec-2024 12:02:21 pipeline/domain/measurementset.py                  |   686 +-
14-Dec-2024 12:02:21 pipeline/domain/measures.py                        |   483 +-
14-Dec-2024 12:02:21 pipeline/domain/observingrun.py                    |   206 +-
14-Dec-2024 12:02:21 pipeline/domain/polarization.py                    |    37 +-
14-Dec-2024 12:02:21 pipeline/domain/scan.py                            |    94 +-
14-Dec-2024 12:02:21 pipeline/domain/source.py                          |   111 +-
14-Dec-2024 12:02:21 pipeline/domain/spectralwindow.py                  |   407 +-
14-Dec-2024 12:02:21 pipeline/domain/state.py                           |   160 +-
14-Dec-2024 12:02:21 pipeline/environment.py                            |   178 +-
14-Dec-2024 12:02:21 pipeline/extern/TsysDataClassFile.py               |     5 +-
14-Dec-2024 12:02:21 pipeline/extern/almahelpers.py                     |   766 ++
14-Dec-2024 12:02:21 pipeline/hif/tasks/makeimages/makeimages.py        |    36 +-
14-Dec-2024 12:02:21 pipeline/hif/tasks/makermsimages/makermsimages.py  |    17 +-
14-Dec-2024 12:02:21 pipeline/hif/tasks/selfcal/selfcal.py              |     8 +-
14-Dec-2024 12:02:21 pipeline/hifa/tasks/__init__.py                    |     2 +-
14-Dec-2024 12:02:21 pipeline/hifa/tasks/polcal/renderer.py             |     2 +-
14-Dec-2024 12:02:21 pipeline/hifa/tasks/tsysflag/__init__.py           |     4 +-
14-Dec-2024 12:02:21 pipeline/hifa/tasks/tsysflag/tsysflag.py           |     4 +-
14-Dec-2024 12:02:21 pipeline/hsd/tasks/baseline/simplegrid.py          |     3 +-
14-Dec-2024 12:02:21 pipeline/hsd/tasks/baseline/validation.py          |     2 +-
14-Dec-2024 12:02:21 pipeline/hsd/tasks/imaging/gridding.py             |     3 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/basetask.py                |     5 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/casa_tasks.py              |    48 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/daskhelpers.py             |    70 +
14-Dec-2024 12:02:21 pipeline/infrastructure/jobrequest.py              |    28 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/logging.py                 |    16 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/mpihelpers.py              |    67 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/sessionutils.py            |    13 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/__init__.py          |     6 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/casa_data.py         |    10 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/conversion.py        |     6 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/diagnostics.py       |     2 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/framework.py         |    16 +-
14-Dec-2024 12:02:21 .../{regression-tester.py => regression_tester.py} |     0
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/subprocess.py        |    14 -
14-Dec-2024 12:02:21 pipeline/infrastructure/utils/utils.py             |     5 +-
14-Dec-2024 12:02:21 pipeline/infrastructure/version.py                 |   472 +-
14-Dec-2024 12:02:21 .../tests/test_procedure_hifa_calimage_tier0.xml   |   395 +
14-Dec-2024 12:02:21 pipeline/runpipeline.py                            |     3 +-
14-Dec-2024 12:02:21 pipeline/runvlapipeline.py                         |     3 +-
14-Dec-2024 12:02:21 pyproject.toml                                     |    54 +
14-Dec-2024 12:02:21 requirements.txt                                   |     6 +-
14-Dec-2024 12:02:21 requirements_dev.txt                               |    23 +
14-Dec-2024 12:02:21 .../requirements_docs.txt => requirements_docs.txt |    25 +-
14-Dec-2024 12:02:21 requirements_exp.txt                               |    24 +
14-Dec-2024 12:02:21 setup.py                                           |   136 +-
14-Dec-2024 12:02:21 84 files changed, 25763 insertions(+), 1838 deletions(-)
14-Dec-2024 12:02:21 create mode 100644 .github/workflows/sphinx.yml
14-Dec-2024 12:02:21 delete mode 100644 closure-compiler.jar
14-Dec-2024 12:02:21 delete mode 100644 docs/README.md
14-Dec-2024 12:02:21 create mode 100644 docs/README.rst
14-Dec-2024 12:02:21 delete mode 100644 docs/pipeline_docs.yaml
14-Dec-2024 12:02:21 create mode 100644 docs/source/_templates/custom-class-template.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/_templates/custom-module-template.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/apisummary.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/dependencies.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/develdocmd/old_releases.md
14-Dec-2024 12:02:21 create mode 100644 docs/source/develdocmd/recipes.md
14-Dec-2024 12:02:21 create mode 100644 docs/source/examples/test1.ipynb
14-Dec-2024 12:02:21 rename docs/source/{rst_examples/installation.rst => examples/test2.rst} (88%)
14-Dec-2024 12:02:21 create mode 100644 docs/source/modular.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/notebooks/context.ipynb
14-Dec-2024 12:02:21 create mode 100644 docs/source/notebooks/tier0dask.ipynb
14-Dec-2024 12:02:21 delete mode 100644 docs/source/pipeline_tasks/pipeline_tasks.rst
14-Dec-2024 12:02:21 create mode 100644 docs/source/releases.rst
14-Dec-2024 12:02:21 create mode 100644 pipe1669.yaml
14-Dec-2024 12:02:21 create mode 100644 pipeline/__main__.py
14-Dec-2024 12:02:21 create mode 100644 pipeline/config.py
14-Dec-2024 12:02:21 create mode 100644 pipeline/extern/almahelpers.py
14-Dec-2024 12:02:21 create mode 100644 pipeline/infrastructure/daskhelpers.py
14-Dec-2024 12:02:21 rename pipeline/infrastructure/utils/{regression-tester.py => regression_tester.py} (100%)
14-Dec-2024 12:02:21 delete mode 100644 pipeline/infrastructure/utils/subprocess.py
14-Dec-2024 12:02:21 create mode 100644 pipeline/recipes/tests/test_procedure_hifa_calimage_tier0.xml
14-Dec-2024 12:02:21 create mode 100644 pyproject.toml
14-Dec-2024 12:02:21 create mode 100644 requirements_dev.txt
14-Dec-2024 12:02:21 rename docs/requirements_docs.txt => requirements_docs.txt (57%)
14-Dec-2024 12:02:21 create mode 100644 requirements_exp.txt
14-Dec-2024 12:02:21 0
14-Dec-2024 12:02:21 casadir: casa-6.6.6-7-py3.10.el8
14-Dec-2024 12:02:21 fullpath: /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8
14-Dec-2024 12:02:21 {'HOSTNAME': 'b39af48aec67', 'PWD': '/home/casatest/casa-build-utils/pipeline', 'HOME': '/home/casatest', 'SHLVL': '1', 'PATH': '/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8:/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin:/home/casatest/casa-build-utils/pipeline/workdir/pipeline:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin', 'OLDPWD': '/home/casatest', '_': '/usr/local/bin/python3.8', 'LC_CTYPE': 'C.UTF-8'}
14-Dec-2024 12:03:32 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '--extra-index-url=https://pypi.org/simple', '--disable-pip-version-check', '--use-pep517', '--upgrade-strategy=only-if-needed', 'numpy==1.23.5', '-r', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt']
14-Dec-2024 12:03:32 Looking in indexes: https://pypi.org/simple, https://pypi.org/simple
14-Dec-2024 12:03:32 Ignoring astropy: markers 'python_version < "3.10"' don't match your environment
14-Dec-2024 12:03:32 Ignoring bdsf: markers 'python_version < "3.10" or sys_platform == "darwin"' don't match your environment
14-Dec-2024 12:03:32 Collecting numpy==1.23.5
14-Dec-2024 12:03:32   Downloading numpy-1.23.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (17.1 MB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.1/17.1 MB 532.5 kB/s eta 0:00:00
14-Dec-2024 12:03:32 Collecting csscompressor==0.9.5
14-Dec-2024 12:03:32   Downloading csscompressor-0.9.5.tar.gz (237 kB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 237.8/237.8 kB 8.0 MB/s eta 0:00:00
14-Dec-2024 12:03:32   Installing build dependencies: started
14-Dec-2024 12:03:32   Installing build dependencies: finished with status 'done'
14-Dec-2024 12:03:32   Getting requirements to build wheel: started
14-Dec-2024 12:03:32   Getting requirements to build wheel: finished with status 'done'
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): started
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32 Collecting cachetools==5.5.0
14-Dec-2024 12:03:32   Downloading cachetools-5.5.0-py3-none-any.whl (9.5 kB)
14-Dec-2024 12:03:32 Collecting mako==1.3.5
14-Dec-2024 12:03:32   Downloading Mako-1.3.5-py3-none-any.whl (78 kB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 78.6/78.6 kB 3.4 MB/s eta 0:00:00
14-Dec-2024 12:03:32 Collecting pypubsub==4.0.3
14-Dec-2024 12:03:32   Downloading Pypubsub-4.0.3-py3-none-any.whl (61 kB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 61.4/61.4 kB 2.3 MB/s eta 0:00:00
14-Dec-2024 12:03:32 Collecting intervaltree==3.1.0
14-Dec-2024 12:03:32   Downloading intervaltree-3.1.0.tar.gz (32 kB)
14-Dec-2024 12:03:32   Installing build dependencies: started
14-Dec-2024 12:03:32   Installing build dependencies: finished with status 'done'
14-Dec-2024 12:03:32   Getting requirements to build wheel: started
14-Dec-2024 12:03:32   Getting requirements to build wheel: finished with status 'done'
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): started
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32 Collecting logutils==0.3.5
14-Dec-2024 12:03:32   Downloading logutils-0.3.5.tar.gz (27 kB)
14-Dec-2024 12:03:32   Installing build dependencies: started
14-Dec-2024 12:03:32   Installing build dependencies: finished with status 'done'
14-Dec-2024 12:03:32   Getting requirements to build wheel: started
14-Dec-2024 12:03:32   Getting requirements to build wheel: finished with status 'done'
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): started
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32 Collecting ps_mem==3.14
14-Dec-2024 12:03:32   Downloading ps_mem-3.14-py2.py3-none-any.whl (19 kB)
14-Dec-2024 12:03:32 Collecting astropy==6.1.4
14-Dec-2024 12:03:32   Downloading astropy-6.1.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (10.0 MB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.0/10.0 MB 23.3 MB/s eta 0:00:00
14-Dec-2024 12:03:32 Collecting MarkupSafe>=0.9.2
14-Dec-2024 12:03:32   Downloading MarkupSafe-3.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20 kB)
14-Dec-2024 12:03:32 Collecting sortedcontainers<3.0,>=2.0
14-Dec-2024 12:03:32   Downloading sortedcontainers-2.4.0-py2.py3-none-any.whl (29 kB)
14-Dec-2024 12:03:32 Collecting astropy-iers-data>=0.2024.8.27.10.28.29
14-Dec-2024 12:03:32   Downloading astropy_iers_data-0.2024.12.9.0.36.21-py3-none-any.whl (1.9 MB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 1.9/1.9 MB 20.5 MB/s eta 0:00:00
14-Dec-2024 12:03:32 Requirement already satisfied: packaging>=19.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (24.1)
14-Dec-2024 12:03:32 Requirement already satisfied: pyerfa>=2.0.1.1 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->-r /home/casatest/casa-build-utils/pipeline/workdir/pipeline/requirements.txt (line 32)) (2.0.1.4)
14-Dec-2024 12:03:32 Collecting PyYAML>=3.13
14-Dec-2024 12:03:32   Downloading PyYAML-6.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (751 kB)
14-Dec-2024 12:03:32      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 751.2/751.2 kB 13.4 MB/s eta 0:00:00
14-Dec-2024 12:03:32 Building wheels for collected packages: csscompressor, intervaltree, logutils
14-Dec-2024 12:03:32   Building wheel for csscompressor (pyproject.toml): started
14-Dec-2024 12:03:32   Building wheel for csscompressor (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32   Created wheel for csscompressor: filename=csscompressor-0.9.5-py3-none-any.whl size=240333 sha256=bd263b31ed87a2b490e6268c24d9a573279baff7ec7d961cd7cae137a7ed9696
14-Dec-2024 12:03:32   Stored in directory: /home/casatest/.cache/pip/wheels/74/75/00/e4b2f02c36016a6df23980e58d041705aa9bea376b1600d42f
14-Dec-2024 12:03:32   Building wheel for intervaltree (pyproject.toml): started
14-Dec-2024 12:03:32   Building wheel for intervaltree (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32   Created wheel for intervaltree: filename=intervaltree-3.1.0-py2.py3-none-any.whl size=26097 sha256=e66b9a417961f81e294b77838b542ec08be56f3e82c7223681e40f62876a5904
14-Dec-2024 12:03:32   Stored in directory: /home/casatest/.cache/pip/wheels/f1/52/97/0884d240db33fb0bbc0c2c9549ff13f6a81ec91bf0c1807615
14-Dec-2024 12:03:32   Building wheel for logutils (pyproject.toml): started
14-Dec-2024 12:03:32   Building wheel for logutils (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32   Created wheel for logutils: filename=logutils-0.3.5-py3-none-any.whl size=19928 sha256=bc23466a6b3936d123dcabc628e60fea7a581e23284f4fe2f880369c7197126f
14-Dec-2024 12:03:32   Stored in directory: /home/casatest/.cache/pip/wheels/fa/b9/12/e139e8d532cc359011f4a8a9586ee962882e4a99d214262b67
14-Dec-2024 12:03:32 Successfully built csscompressor intervaltree logutils
14-Dec-2024 12:03:32 Installing collected packages: sortedcontainers, ps_mem, logutils, csscompressor, PyYAML, pypubsub, numpy, MarkupSafe, intervaltree, cachetools, astropy-iers-data, mako, astropy
14-Dec-2024 12:03:32   Attempting uninstall: numpy
14-Dec-2024 12:03:32     Found existing installation: numpy 2.0.1
14-Dec-2024 12:03:32     Uninstalling numpy-2.0.1:
14-Dec-2024 12:03:32       Successfully uninstalled numpy-2.0.1
14-Dec-2024 12:03:32 Successfully installed MarkupSafe-3.0.2 PyYAML-6.0.2 astropy-6.1.4 astropy-iers-data-0.2024.12.9.0.36.21 cachetools-5.5.0 csscompressor-0.9.5 intervaltree-3.1.0 logutils-0.3.5 mako-1.3.5 numpy-1.23.5 ps_mem-3.14 pypubsub-4.0.3 sortedcontainers-2.4.0
14-Dec-2024 12:03:32 0
14-Dec-2024 12:03:32 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/pip3', 'install', '.']
14-Dec-2024 12:03:32 Processing /home/casatest/casa-build-utils/pipeline/workdir/pipeline
14-Dec-2024 12:03:32   Installing build dependencies: started
14-Dec-2024 12:03:32   Installing build dependencies: finished with status 'done'
14-Dec-2024 12:03:32   Getting requirements to build wheel: started
14-Dec-2024 12:03:32   Getting requirements to build wheel: finished with status 'done'
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): started
14-Dec-2024 12:03:32   Preparing metadata (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:32 Requirement already satisfied: pypubsub==4.0.3 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (4.0.3)
14-Dec-2024 12:03:32 Requirement already satisfied: logutils==0.3.5 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (0.3.5)
14-Dec-2024 12:03:32 Requirement already satisfied: csscompressor==0.9.5 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (0.9.5)
14-Dec-2024 12:03:32 Requirement already satisfied: ps_mem==3.14 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (3.14)
14-Dec-2024 12:03:32 Requirement already satisfied: astropy==6.1.4 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (6.1.4)
14-Dec-2024 12:03:32 Requirement already satisfied: intervaltree==3.1.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (3.1.0)
14-Dec-2024 12:03:32 Requirement already satisfied: mako==1.3.5 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (1.3.5)
14-Dec-2024 12:03:46 Requirement already satisfied: cachetools==5.5.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from Pipeline==2024.2.0.4+145.g0d02c86a2) (5.5.0)
14-Dec-2024 12:03:46 Requirement already satisfied: PyYAML>=3.13 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->Pipeline==2024.2.0.4+145.g0d02c86a2) (6.0.2)
14-Dec-2024 12:03:46 Requirement already satisfied: packaging>=19.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->Pipeline==2024.2.0.4+145.g0d02c86a2) (24.1)
14-Dec-2024 12:03:46 Requirement already satisfied: astropy-iers-data>=0.2024.8.27.10.28.29 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->Pipeline==2024.2.0.4+145.g0d02c86a2) (0.2024.12.9.0.36.21)
14-Dec-2024 12:03:46 Requirement already satisfied: pyerfa>=2.0.1.1 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->Pipeline==2024.2.0.4+145.g0d02c86a2) (2.0.1.4)
14-Dec-2024 12:03:46 Requirement already satisfied: numpy>=1.23 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from astropy==6.1.4->Pipeline==2024.2.0.4+145.g0d02c86a2) (1.23.5)
14-Dec-2024 12:03:46 Requirement already satisfied: sortedcontainers<3.0,>=2.0 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from intervaltree==3.1.0->Pipeline==2024.2.0.4+145.g0d02c86a2) (2.4.0)
14-Dec-2024 12:03:46 Requirement already satisfied: MarkupSafe>=0.9.2 in /home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages (from mako==1.3.5->Pipeline==2024.2.0.4+145.g0d02c86a2) (3.0.2)
14-Dec-2024 12:03:46 Building wheels for collected packages: Pipeline
14-Dec-2024 12:03:46   Building wheel for Pipeline (pyproject.toml): started
14-Dec-2024 12:03:46   Building wheel for Pipeline (pyproject.toml): finished with status 'done'
14-Dec-2024 12:03:46   Created wheel for Pipeline: filename=Pipeline-2024.2.0.4+145.g0d02c86a2-py3-none-any.whl size=4122676 sha256=3ba666ad49405d629322cd5d6ff2d54fd1e65f28c3f80534765eec04af6b3877
14-Dec-2024 12:03:46   Stored in directory: /tmp/pip-ephem-wheel-cache-f7debhyu/wheels/7e/4c/71/bd7963ad57705c5c4c611d608b708d19a5fa10d4d8417e129b
14-Dec-2024 12:03:46 Successfully built Pipeline
14-Dec-2024 12:03:46 Installing collected packages: Pipeline
14-Dec-2024 12:03:46 Successfully installed Pipeline-2024.2.0.4+145.g0d02c86a2
14-Dec-2024 12:03:46 stderr:
14-Dec-2024 12:03:46 stderr: [notice] A new release of pip available: 22.3.1 -> 24.3.1
14-Dec-2024 12:03:46 stderr: [notice] To update, run: pip install --upgrade pip
14-Dec-2024 12:03:46 0
14-Dec-2024 12:03:46 Executing: ['/home/casatest/casa-build-utils/pipeline/workdir/casa-6.6.6-7-py3.10.el8/bin/python3', '-m', 'pytest', '/home/casatest/casa-build-utils/pipeline/workdir/pipeline', '--junitxml=/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml']
14-Dec-2024 12:03:46 stderr:
14-Dec-2024 12:03:46 stderr: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
14-Dec-2024 12:03:46 stderr:
14-Dec-2024 12:03:46 stderr: Warning: measurespath must exist as a directory and it must be owned by the user.
14-Dec-2024 12:03:46 stderr: Warning: no auto update is possible on this measurespath by this user.
14-Dec-2024 12:03:46 stderr:
14-Dec-2024 12:03:46 stderr: The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
14-Dec-2024 12:03:46 stderr: The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
14-Dec-2024 12:03:46 stderr: visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
14-Dec-2024 12:03:46 stderr:
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        Warning: measurespath must exist as a directory and it must be owned by the user.
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        Warning: no auto update is possible on this measurespath by this user.
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information
14-Dec-2024 12:03:46 stderr: 2024-12-14 17:03:46        SEVERE        ::casa        
14-Dec-2024 12:03:46 stderr: ImportError while loading conftest '/home/casatest/casa-build-utils/pipeline/workdir/pipeline/conftest.py'.
14-Dec-2024 12:03:46 stderr: conftest.py:8: in <module>
14-Dec-2024 12:03:46 stderr:     from casatasks import casalog
14-Dec-2024 12:03:46 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatasks/__init__.py:5: in <module>
14-Dec-2024 12:03:46 stderr:     from casatools import logsink as _logsink
14-Dec-2024 12:03:46 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:257: in <module>
14-Dec-2024 12:03:46 stderr:     raise config_except
14-Dec-2024 12:03:46 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py:116: in <module>
14-Dec-2024 12:03:46 stderr:     do_auto_updates(config, logger)
14-Dec-2024 12:03:46 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/do_auto_updates.py:73: in do_auto_updates
14-Dec-2024 12:03:46 stderr:     data_update(configDict.measurespath, logger=logger, auto_update_rules=True, verbose=verbose)
14-Dec-2024 12:03:46 stderr: ../casa-6.6.6-7-py3.10.el8/lib/py/lib/python3.10/site-packages/casaconfig/private/data_update.py:158: in data_update
14-Dec-2024 12:03:46 stderr:     raise AutoUpdatesNotAllowed("data_update: path must exist as a directory and it must be owned by the user, path = %s" % path)
14-Dec-2024 12:03:46 stderr: E   casaconfig.private.CasaconfigErrors.AutoUpdatesNotAllowed: data_update: path must exist as a directory and it must be owned by the user, path = /home/casatest/.casa/data
14-Dec-2024 12:03:46 measures data is not available
14-Dec-2024 12:03:46 4
14-Dec-2024 12:03:46 mkdir: cannot create directory 'workdir': File exists
14-Dec-2024 12:03:46 cp: cannot stat '/home/casatest/casa-build-utils/pipeline/workdir/pipeline_test_result.xml': No such file or directory
14-Dec-2024 12:03:47 chown: cannot access '/pkgout/*': No such file or directory
14-Dec-2024 12:03:47 Failing task since return code of [/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT770-PPT666-62-ScriptBuildTask-1791442079424183781.sh] was 1 while expected 0
14-Dec-2024 12:03:47 Finished task 'Test' with result: Failed
14-Dec-2024 12:03:47 Starting task 'Cleanup' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
14-Dec-2024 12:03:47
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-1669-run-dev-pipeline-with-modular-casa6 - Pipeline PR Test 6.6.6 #62 (PIPE-PPRT770-PPT666-62)'
... running command line:
/export/home/cbt-pipeline-test/ci-workspace/bamboohome/temp/PIPE-PPRT770-PPT666-62-ScriptBuildTask-4019943328203816292.sh
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT770-PPT666
14-Dec-2024 12:03:47 Starting cleanup
14-Dec-2024 12:03:47 Error response from daemon: No such container: pipeline-test
14-Dec-2024 12:03:47 Error response from daemon: No such container: pipeline-test
14-Dec-2024 12:03:47 Cleanup complete
14-Dec-2024 12:03:47 Finished task 'Cleanup' with result: Success
14-Dec-2024 12:03:47 Running post build plugin 'Docker Container Cleanup'
14-Dec-2024 12:03:47
Beginning to execute external process for build 'Pipeline - Pipeline Pull Request Test - PIPE-1669-run-dev-pipeline-with-modular-casa6 - Pipeline PR Test 6.6.6 #62 (PIPE-PPRT770-PPT666-62)'
... running command line:
/usr/bin/docker rm -f pipelinetest
... in: /export/home/cbt-pipeline-test/ci-workspace/bamboohome/xml-data/build-dir/PIPE-PPRT770-PPT666
14-Dec-2024 12:04:00 pipelinetest
14-Dec-2024 12:04:00 Running post build plugin 'NCover Results Collector'
14-Dec-2024 12:04:00 Running post build plugin 'Build Results Label Collector'
14-Dec-2024 12:04:00 Running post build plugin 'Clover Results Collector'
14-Dec-2024 12:04:00 Running post build plugin 'npm Cache Cleanup'
14-Dec-2024 12:04:00 Running post build plugin 'Artifact Copier'
14-Dec-2024 12:04:00 Publishing an artifact: Result xml
14-Dec-2024 12:04:00 Failing as no matching files has been found and empty artifacts are not allowed.
14-Dec-2024 12:04:00 Unable to publish artifact [Result xml]:
14-Dec-2024 12:04:00 The artifact is required, build will now fail.
14-Dec-2024 12:04:00 The artifact hasn't been successfully published after 86.05 ms
14-Dec-2024 12:04:00 Finalising the build...
14-Dec-2024 12:04:00 Stopping timer.
14-Dec-2024 12:04:00 Build PIPE-PPRT770-PPT666-62 completed.
14-Dec-2024 12:04:00 Running on server: post build plugin 'Build Hanging Detection Configuration'
14-Dec-2024 12:04:00 Running on server: post build plugin 'NCover Results Collector'
14-Dec-2024 12:04:00 Running on server: post build plugin 'Build Labeller'
14-Dec-2024 12:04:00 Running on server: post build plugin 'Clover Delta Calculator'
14-Dec-2024 12:04:00 Running on server: post build plugin 'Maven Dependencies Postprocessor'
14-Dec-2024 12:04:00 All post build plugins have finished
14-Dec-2024 12:04:00 Generating build results summary...
14-Dec-2024 12:04:00 Saving build results to disk...
14-Dec-2024 12:04:00 Store variable context...
14-Dec-2024 12:04:00 Finished building PIPE-PPRT770-PPT666-62.