Updating files:  97% (8935/9211)
Updating files:  98% (9027/9211)
Updating files:  99% (9119/9211)
Updating files: 100% (9211/9211)
Updating files: 100% (9211/9211), done.
Switched to a new branch 'CAS-13877'
Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/casacore'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source'...
Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/abseil-cpp'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/benchmark'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/bloaty'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/boringssl'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/cares/cares'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/gflags'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/googletest'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/protobuf'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/zlib'...
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/gflags/doc'...
Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
configure.ac:57: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:57: the top level
configure.ac:57: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:36: AX_CXX11_RESET_CHECK is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:57: the top level
configure.ac:66: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
configure.ac:66: the top level
configure.ac:68: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:68: the top level
configure.ac:68: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:36: AX_CXX11_RESET_CHECK is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:68: the top level
configure.ac:71: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
configure.ac:71: the top level
configure.ac:73: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:73: the top level
configure.ac:73: warning: $as_echo is obsolete; use AS_ECHO(["message"]) instead
ac/m4/m4_ax_cxx11.m4:19: AX_CXX11_CLEAR_CACHE is expanded from...
ac/m4/m4_ax_cxx11.m4:36: AX_CXX11_RESET_CHECK is expanded from...
ac/m4/m4_ax_cxx11.m4:69: AX_CXX11 is expanded from...
configure.ac:73: the top level
configure.ac:165: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:165: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
lib/m4sugar/m4sh.m4:692: _AS_IF_ELSE is expanded from...
lib/m4sugar/m4sh.m4:699: AS_IF is expanded from...
./lib/autoconf/general.m4:2249: AC_CACHE_VAL is expanded from...
./lib/autoconf/general.m4:2270: AC_CACHE_CHECK is expanded from...
ac/m4/m4_ax_lib_stdcxx.m4:31: AX_LIB_STDCXX is expanded from...
configure.ac:165: the top level
configure.ac:259: warning: AC_PROG_LEX without either yywrap or noyywrap is obsolete
./lib/autoconf/programs.m4:716: _AC_PROG_LEX is expanded from...
./lib/autoconf/programs.m4:709: AC_PROG_LEX is expanded from...
configure.ac:259: the top level
configure.ac:273: warning: The macro `AC_TRY_COMPILE' is obsolete.
configure.ac:273: You should run autoupdate.
./lib/autoconf/general.m4:2847: AC_TRY_COMPILE is expanded from...
ac/m4/m4_ax_wcslib.m4:5: AX_WCSLIB is expanded from...
configure.ac:273: the top level
configure.ac:323: warning: The macro `AC_TRY_LINK' is obsolete.
configure.ac:323: You should run autoupdate.
./lib/autoconf/general.m4:2920: AC_TRY_LINK is expanded from...
ac/m4/m4_ax_libxml2.m4:1: AX_LIBXML is expanded from...
configure.ac:323: the top level
configure: WARNING: No working MPI compiler could be found, won't use MPI.
/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/venv/lib/python3.8/site-packages/setuptools/dist.py:463: UserWarning: Normalizing '6.5.2.1a100.dev+dirty' to '6.5.2.1a100.dev0+dirty'
  warnings.warn(tmpl.format(**locals()))
package init file 'build/lib.macosx-12.0-x86_64-3.8/casatasks/__xml__/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-12.0-x86_64-3.8/casatasks/private/__init__.py' not found (or not a regular file)
error: pathspec 'CAS-13877' did not match any file(s) known to git
/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/venv/lib/python3.8/site-packages/setuptools/dist.py:463: UserWarning: Normalizing '6.5.2.1a100.dev+dirty' to '6.5.2.1a100.dev0+dirty'
  warnings.warn(tmpl.format(**locals()))
package init file 'build/lib.macosx-12.0-x86_64-3.8.13.final/casashell/private/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-12.0-x86_64-3.8.13.final/casashell/private/ttconfig/__init__.py' not found (or not a regular file)
Switched to a new branch 'CAS-13877'
Cloning into 'casalith'...
warning: the following paths have collided (e.g. case-sensitive paths
on a case-insensitive filesystem) and only one from the same
colliding group is in the working tree:

  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc'
  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/orteCC'
  'build-casalith/work/linux/template/lib/mpi/bin/ortecc'
  'build-casalith/work/linux/template/lib/mpi/bin/vtCC'
  'build-casalith/work/linux/template/lib/mpi/bin/vtcc'
Submodule 'build-casalith/work/casa-pkg' (https://open-bitbucket.nrao.edu/scm/casa/casa-pkg.git) registered for path 'build-casalith/work/casa-pkg'
Cloning into '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa-build-utils/casalith/casalith/build-casalith/work/casa-pkg'...
error: pathspec 'CAS-13877' did not match any file(s) known to git
exit status 512 from make at ./generate-distro line 932.
./macbuildcasalith.sh: line 87: cd: casalith/build-casalith/work/Darwin/output: No such file or directory
mv: casa-CAS-13877-0 is not a directory
Can't open perl script "sign.pl": No such file or directory
Can't open perl script "getmacpackagename.pl": No such file or directory
./macbuildcasalith.sh: line 108: casalith/build-casalith/work/darwin/output/CASA.app/Contents/MacOS/casa: No such file or directory
./macbuildcasalith.sh: line 109: casalith/build-casalith/work/casa-pkg/packaging/scripts/make-dmg: No such file or directory
fatal: destination path 'casa-build-utils' already exists and is not an empty directory.
find: /Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/notarize_work/CASA.app: No such file or directory
Traceback (most recent call last):
  File "notarize.py", line 262, in <module>
    sign_app()
  File "notarize.py", line 116, in sign_app
    shell.runshell(cmd.split(), work_dir + "/CASA.app")
  File "/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa-build-utils/notarization/shell_runner.py", line 71, in runshell
    result = execute(
  File "/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa-build-utils/notarization/shell_runner.py", line 34, in execute
    rc = loop.run_until_complete(
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/base_events.py", line 616, in run_until_complete
    return future.result()
  File "/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/casa-build-utils/notarization/shell_runner.py", line 20, in _stream_subprocess
    process = await asyncio.create_subprocess_exec(*cmd,
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/subprocess.py", line 236, in create_subprocess_exec
    transport, protocol = await loop.subprocess_exec(
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/base_events.py", line 1630, in subprocess_exec
    transport = await self._make_subprocess_transport(
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/unix_events.py", line 197, in _make_subprocess_transport
    transp = _UnixSubprocessTransport(self, protocol, args, shell,
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/base_subprocess.py", line 36, in __init__
    self._start(args=args, shell=shell, stdin=stdin, stdout=stdout,
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/asyncio/unix_events.py", line 789, in _start
    self._proc = subprocess.Popen(
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/subprocess.py", line 858, in __init__
    self._execute_child(args, executable, preexec_fn, close_fds,
  File "/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.8/lib/python3.8/subprocess.py", line 1704, in _execute_child
    raise child_exception_type(errno_num, err_msg, err_filename)
FileNotFoundError: [Errno 2] No such file or directory: '/Volumes/DATA/bamboohome/xml-data/build-dir/CASA-TMPMACOS12B1-OSX12PY38BUILD/notarize_work/CASA.app'