Build #1

Plan branch:

Build: #1 failed

Job: Build Test ManyLinux 2.28 Single Command failed

Stages & jobs

  1. Build and Test

  2. Test Pytest Coverage

Job result summary

Completed
Duration
684 minutes
Agent
casa-perf-test.cv.nrao.edu
Revision
7c92cd45433dd8e4597e34fa13a05ceb78d55eb1
Total tests
254

Tests

  • 254 tests in total
  • 20 tests failed
  • 20 failures are new
  • 80 tests were quarantined / skipped
  • 595 minutes taken in total.
New test failures 20
Status Test Duration
Collapse Failed pccor_test_missing test_missingPcDataForRefant
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_missing'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_missing test_missingPcDataIgnore
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_missing'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_missing test_missingPcDataUseFringefit
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_missing'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_missing test_missingPhaseCalSubtable
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_missing'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseAntenna
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseAntenna_antennas_specified
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseAntenna_mixes_excluded
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseAntenna_nonexistent_antenna
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseAntenna_refant_excluded
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseScanAndTimerange_bad_scan
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseScanAndTimerange_bad_timerange
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseScanAndTimerange_incompatible_scan
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseScanAndTimerange_invalid_scan
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseScanAndTimerange_invalid_timerange
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_parseSpw
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_provideFringeFitTable
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_parse test_provideFringeFitTable_equal
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'"
cls = <class 'test_task_pccor.pccor_test_parse'>

    @classmethod
    def setUpClass(cls):
        for filename in test_data_files:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_solutionValues test_solutionValues
< 1 sec 
FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/BM303W_no_FD_spw_0.ms'
self = <test_task_pccor.pccor_test_solutionValues testMethod=test_solutionValues>

    def setUp(self):
>       shutil.copytree(os.path.join(datapath, def_ms), def_ms)

test_task_pccor.py:266: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
(52 more lines...)
Collapse Failed pccor_test_splitMses test_splitMses_contiguous_ms
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/contiguous_split.ms'"
cls = <class 'test_task_pccor.pccor_test_splitMses'>

    @classmethod
    def setUpClass(cls):
        for filename in [contiguous_ms, non_contiguous_ms]:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)
Collapse Failed pccor_test_splitMses test_splitMses_non_contiguous_ms
< 1 sec 
failed on setup with "FileNotFoundError: [Errno 2] No such file or directory: 'unittest/pccor/contiguous_split.ms'"
cls = <class 'test_task_pccor.pccor_test_splitMses'>

    @classmethod
    def setUpClass(cls):
        for filename in [contiguous_ms, non_contiguous_ms]:
>           shutil.copytree(os.path.join(datapath, filename), filename)

(54 more lines...)

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Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/casacore'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source'...
Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/abseil-cpp'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/benchmark'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/bloaty'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/boringssl'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/cares/cares'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/gflags'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/googletest'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/protobuf'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/zlib'...
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/gflags/doc'...
Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
Cloning into '/export/data_1/bamboohome/xml-data/build-dir/CASA-RECC3124-BTM2SC/source/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
Switched to a new branch 'CAS-14642'
Cloning into 'casashell'...
error: pathspec 'CAS-14642' did not match any file(s) known to git
Error response from daemon: No such container: casalith_container
Error response from daemon: No such container: casalith_container
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 6002k  100 6002k    0     0  42.7M      0 --:--:-- --:--:-- --:--:-- 42.7M
ls: cannot access '*.whl': No such file or directory
error: pathspec 'CAS-14642' did not match any file(s) known to git
  if infile is not 'None' and infile is not '':
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_gencal.py:100: SyntaxWarning: "is not" with 'str' literal. Did you mean "!="?
  if antenna is not '' or pol is not '' or len(parameter) != 0:
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_gencal.py:100: SyntaxWarning: "is not" with 'str' literal. Did you mean "!="?
  if antenna is not '' or pol is not '' or len(parameter) != 0:
<unknown>:44: SyntaxWarning: invalid escape sequence '\d'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_getcalmodvla.py:44: SyntaxWarning: invalid escape sequence '\d'
  pattern = "^\d{4}-\d{2}-\d{2}$"
<unknown>:44: SyntaxWarning: invalid escape sequence '\d'
<unknown>:598: SyntaxWarning: invalid escape sequence '\d'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_immath.py:598: SyntaxWarning: invalid escape sequence '\d'
  m = re.match("^IM(\d+)$", imagemd)
<unknown>:598: SyntaxWarning: invalid escape sequence '\d'
<unknown>:963: SyntaxWarning: invalid escape sequence '\d'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_plotbandpass.py:963: SyntaxWarning: invalid escape sequence '\d'
  if re.match("^\d+?\.\d+?$", lo1) is None:
<unknown>:963: SyntaxWarning: invalid escape sequence '\d'
<unknown>:46: SyntaxWarning: invalid escape sequence '\c'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_plotprofilemap.py:46: SyntaxWarning: invalid escape sequence '\c'
  dsyb = '$^\circ$'
<unknown>:46: SyntaxWarning: invalid escape sequence '\c'
<unknown>:461: SyntaxWarning: invalid escape sequence '\.'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_setjy.py:461: SyntaxWarning: invalid escape sequence '\.'
  regex = re.compile('^\.\S+')
<unknown>:461: SyntaxWarning: invalid escape sequence '\.'
<unknown>:384: SyntaxWarning: invalid escape sequence '\d'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_simalma.py:384: SyntaxWarning: invalid escape sequence '\d'
  q = re.compile('CYCLE\d?\d')
<unknown>:384: SyntaxWarning: invalid escape sequence '\d'
<unknown>:573: SyntaxWarning: invalid escape sequence '\d'
<unknown>:819: SyntaxWarning: invalid escape sequence '\d'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_simobserve.py:573: SyntaxWarning: invalid escape sequence '\d'
  q = re.compile('(\d+.?\d+)\s*PB')
/home/casatest/venv/lib/python3.12/site-packages/casatasks/private/task_simobserve.py:819: SyntaxWarning: invalid escape sequence '\d'
  q = re.compile('(\d*/\d+/\d+)([/:\d]*)')
<unknown>:573: SyntaxWarning: invalid escape sequence '\d'
<unknown>:819: SyntaxWarning: invalid escape sequence '\d'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/sdintimaging.py:15: SyntaxWarning: invalid escape sequence '\*'
  """
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/simanalyze.py:15: SyntaxWarning: invalid escape sequence '\*'
  """
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/split.py:15: SyntaxWarning: invalid escape sequence '\*'
  """
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
/home/casatest/venv/lib/python3.12/site-packages/casatasks/tclean.py:15: SyntaxWarning: invalid escape sequence '\*'
  """
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\&'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\_'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\|'
<unknown>:1790: SyntaxWarning: invalid escape sequence '\w'
<unknown>:3595: SyntaxWarning: invalid escape sequence '\.'
<unknown>:213: SyntaxWarning: invalid escape sequence '\('
<unknown>:399: SyntaxWarning: invalid escape sequence '\s'
<unknown>:415: SyntaxWarning: invalid escape sequence '\s'
<unknown>:416: SyntaxWarning: invalid escape sequence '\s'
<unknown>:440: SyntaxWarning: invalid escape sequence '\w'
<unknown>:441: SyntaxWarning: invalid escape sequence '\s'
<unknown>:442: SyntaxWarning: invalid escape sequence '\s'
<unknown>:882: SyntaxWarning: invalid escape sequence '\d'
<unknown>:237: SyntaxWarning: invalid escape sequence '\!'
<unknown>:248: SyntaxWarning: invalid escape sequence '\.'
<unknown>:249: SyntaxWarning: invalid escape sequence '\.'
<unknown>:44: SyntaxWarning: invalid escape sequence '\d'
<unknown>:598: SyntaxWarning: invalid escape sequence '\d'
<unknown>:963: SyntaxWarning: invalid escape sequence '\d'
<unknown>:46: SyntaxWarning: invalid escape sequence '\c'
<unknown>:461: SyntaxWarning: invalid escape sequence '\.'
<unknown>:384: SyntaxWarning: invalid escape sequence '\d'
<unknown>:573: SyntaxWarning: invalid escape sequence '\d'
<unknown>:819: SyntaxWarning: invalid escape sequence '\d'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
<unknown>:15: SyntaxWarning: invalid escape sequence '\*'
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