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casa6

Sandra Castro 28 Jun 2023 f704e4b257aaf7b46a6d8b2ff515a9272afcb8cf

Merge branch 'master' into CAS-14036
Urvashi Rao Venkata 27 Jun 2023 a6be85d6a7e7e8ffb68c823b5ed4611b1c956f9b m

Pull request #716: CAS-14075 : Edited upper end of allowed freq range for ALMA band 1
Merge in CASA/casa6 from CAS-14075 to master

* commit 'd745dbc09eca3d2ad9b1326728116264161924de':
CAS-14075 : Edited upper end of allowed freq range for ALMA band 1
David Mehringer 22 Jun 2023 a943bb15f31c2f1966b3b71b776c77fb3f74d357 m

Pull request #710: CAS-12599 new reqs for ia.restoringbeam implemented
Merge in CASA/casa6 from CAS-12599 to master

* commit '69eeccb9bf592927e42ff7423141330965e5c886':
  Move run_shell_command to subprocess
  Add --no-edit flag to git merge option to accept the auto-generated messag
  Update to verbosity in git status for runtest merge test
  Fix from CAS-14129 added to this branch for testing
  fix exception message typo
  updated test_immath for location of messages in output
  added hopefully useful log messages
  bug fix, fix some tests
  Modified for new user-based rules
  update setrestoringbeam() docs
  CAS-12599 add warning messages for special case of existing beam and specified major and/or minor axis having length 0
Akeem Wells 21 Jun 2023 69eeccb9bf592927e42ff7423141330965e5c886 m

Move run_shell_command to subprocess
- casatestutils/runtest.py (version 69eeccb9bf592927e42ff7423141330965e5c886) (diffs)
Akeem Wells 19 Jun 2023 73e287052a3a84b4067d140e36fb92cfa2f3e73d m

Add --no-edit flag to git merge option to accept the auto-generated messag
- casatestutils/runtest.py (version 73e287052a3a84b4067d140e36fb92cfa2f3e73d) (diffs)
Akeem Wells 16 Jun 2023 39f31b9dbab7e7a15cf46e8a717c03270e42cac7 m

Update to verbosity in git status for runtest merge test
- casatestutils/runtest.py (version 39f31b9dbab7e7a15cf46e8a717c03270e42cac7) (diffs)
Akeem Wells 15 Jun 2023 77e6ac04dadf4dbd19764cf051eba25b69cfdbc1 m

Fix from CAS-14129 added to this branch for testing
- casatestutils/runtest.py (version 77e6ac04dadf4dbd19764cf051eba25b69cfdbc1) (diffs)
Kumar Golap 15 Jun 2023 91e3323e6a22c8e58a64e4ea3b869709ff4ed3a2 m

Pull request #715: CAS-13794
Merge in CASA/casa6 from CAS-13794 to master

* commit '6616d0baceedd84211d035c4bdd32c35bf0c2267':
  Made some changes in doc as requested by the Josh
  Some changes to fix lock and a problem with str + operator issue on mac
  added a lock release in destructor
  CAS-13794 : Tool instantiation fix in tool test
  CAS-13794 : Fixed tool instantiation call inside task_msuvbin.py
  Made the changes as requested by the testers i.e having flagbackup and mode which can be 'bin' or 'write_flags_back'
  changes to make it work with modular system
  made a dummy change to see if doc build pixks it
  manual merge of master to this one
  Fix typo in component_to_test_map.json
  blacked
  Changed some parameter names and default as requested
  Modified the location of the test datasets.
  Adding new test_tool_msuvbinner to component mapping file to enable the automatic tests.
  Made the test runnable
  test for msuvbinner tool
  added an example
  Added a msuvbinner tool and msuvbin task so that we have it in casa6
Urvashi Rao Venkata 15 Jun 2023 b5b1671a02b019333d1d6331b006285a7e2446aa m

Pull request #711: CAS-14043
Merge in CASA/casa6 from CAS-14043 to master

* commit 'ff7fb893179694b582149078f18b6ccc916804e0':
  Changed the tolerance for values that should be ~0. They were to strict and differed between operating systems
  Fixed issue with gencal missing from imports
  Added new case to the gaincal test for bug detected in CAS-14043 where a mismatch of spws in the caltable and ms would cause a segfault
  For CAS-14071, in KJones.cc, cater for nCalSpw>nMSSpw when filling KrefFreq_ values from caltable (fixes bad memory free)
  For CAS-14043, tidy up some object names to make it clearer we are accessing a caltable's SPW subtable info
  For CAS-14043: For delay solution application, only populate pivot frequencies from spws available in the caltable, even if MS has more spws.
Urvashi R._V <rurvashi@aoc.nrao.edu> 15 Jun 2023 d745dbc09eca3d2ad9b1326728116264161924de m

CAS-14075 : Edited upper end of allowed freq range for ALMA band 1
- casatasks/src/private/simutil.py (version d745dbc09eca3d2ad9b1326728116264161924de) (diffs)
Kumar Golap <kgolap@tizan.aoc.nrao.edu> 14 Jun 2023 6616d0baceedd84211d035c4bdd32c35bf0c2267 m

Merge branch 'master' into CAS-13794
Urvashi R._V <rurvashi@aoc.nrao.edu> 13 Jun 2023 ff7fb893179694b582149078f18b6ccc916804e0 m

Merge branch 'master' into CAS-14043
David Mehringer 12 Jun 2023 ada015dda0a27e745307f4848543937017283d2a m

Merge branch 'master' into CAS-12599
David Mehringer 12 Jun 2023 2863e78d3855162ecb19c5d73884fcaf5391717a m

fix exception message typo
- casatools/src/tools/image/image_cmpt.cc (version 2863e78d3855162ecb19c5d73884fcaf5391717a) (diffs)
Takeshi Nakazato 12 Jun 2023 913367647c525e2ab4fe123510f0d838e6971b11 m

Pull request #708: CAS-14096
Merge in CASA/casa6 from CAS-14096 to master

* commit '18fc9892844658a0f14f6d6996103c1b668fd1c7':
CAS-14096 apply the same fix to similar code
CAS-14096 insert extra condition suggested by Todd Hunter
Takeshi Nakazato 12 Jun 2023 858b6cb67c734de6206d78ec0013811e646a0f0f m

Pull request #709: CAS-14111
Merge in CASA/casa6 from CAS-14111 to master

* commit 'dc7116090fa9f3cdeae9e096fb47fbcad2bfc4b2':
  CAS-14111 enable debug message only for debug build
  CAS-14111 ensure aligned address for libsakura input arrays
  CAS-14111 bug fix in casaVector()
  CAS-14111 make sure input/output arrays for libsakura functions are aligned
  CAS-14111 updated SakuraAlignedArray API
Takeshi Nakazato 07 Jun 2023 974414231b5a61b1e203c695543dd667c0939f91 m

Pull request #706: CAS-14143
Merge in CASA/casa6 from CAS-14143 to master

* commit '404299c4ede09576d22f0721b0103320933ad9f2':
  CAS-14143 add type annotation to __convert_to_pol_selection
  CAS-14143 refactoring for readability
  added some comments
  CAS-14143 add unit test for pol-dependent jyperk csv file
  CAS-14143 properly handle pol-dependent Jy/K factor
Takeshi Nakazato 06 Jun 2023 404299c4ede09576d22f0721b0103320933ad9f2 m

Merge branch 'master' into CAS-14143
Kumar Golap <kgolap@tizan.aoc.nrao.edu> 05 Jun 2023 685c3bce276093e1f5ebb215cef53e71c342fb77 m

Made some changes in doc as requested by the Josh
- casatasks/xml/msuvbin.xml (version 685c3bce276093e1f5ebb215cef53e71c342fb77) (diffs)
Des Small 05 Jun 2023 105035817ac05e5e71902d3ed4fc74c99448d6cc m

Pull request #705: CAS-14083
Merge in CASA/casa6 from CAS-14083 to master

* commit '19e8b47f3c686085e06e2b669ed6bb0eae8e5e16':
  changed tb tool call to match others / fixed typo
  expanded the test case to include a check for manually setting the paramactive to [T,T,F]
  fixed typo with table tool command
  added an explicit statment for paramactive=[]
  added new test cast to test_task_fringefit that checks for the proper behavior when using the default setting for paramactive for callib
  Fixing a bug in task_fringefit.py so that callib works
Takeshi Nakazato 31 May 2023 1ff88274e4ff469089e9bdba74125d8fcb0cc0fe m

CAS-14143 add type annotation to __convert_to_pol_selection
NAOJ code review Refs #2566
- casatasks/src/private/task_gencal.py (version 1ff88274e4ff469089e9bdba74125d8fcb0cc0fe) (diffs)
Takeshi Nakazato 31 May 2023 c34f88965fcd9ae66cb36480b48cc48af8dbbd57 m

CAS-14143 refactoring for readability
NAOJ code review Refs #2565
- casatasks/src/private/task_gencal.py (version c34f88965fcd9ae66cb36480b48cc48af8dbbd57) (diffs)
Takeshi Nakazato 31 May 2023 dc7116090fa9f3cdeae9e096fb47fbcad2bfc4b2 m

CAS-14111 enable debug message only for debug build
- casatools/src/code/casa_sakura/SakuraAlignedArray.tcc (version dc7116090fa9f3cdeae9e096fb47fbcad2bfc4b2) (diffs)
Neal Schweighart 30 May 2023 8c01fdd26b89a4479fda63e69c73c9a082c3b80e m

Changed the tolerance for values that should be ~0. They were to strict and differed between operating systems
- casatasks/tests/tasks/test_task_gaincal.py (version 8c01fdd26b89a4479fda63e69c73c9a082c3b80e) (diffs)
Takeshi Nakazato 30 May 2023 07e43511a0b13e7cbd179ec0a59fd9e67091c1df m

CAS-14111 ensure aligned address for libsakura input arrays
- casatools/src/code/singledish/SingleDish/LineFinder.cc (version 07e43511a0b13e7cbd179ec0a59fd9e67091c1df) (diffs)
- casatools/src/code/singledish/SingleDish/SingleDishMS.cc (version 07e43511a0b13e7cbd179ec0a59fd9e67091c1df) (diffs)
- casatools/src/code/synthesis/MeasurementComponents/SingleDishSkyCal.cc (version 07e43511a0b13e7cbd179ec0a59fd9e67091c1df) (diffs)
Takeshi Nakazato 29 May 2023 8c8caf0574f0e6653890d9b473ba4b499f858582 m

CAS-14111 bug fix in casaVector()
- casatools/src/code/casa_sakura/SakuraAlignedArray.h (version 8c8caf0574f0e6653890d9b473ba4b499f858582) (diffs)
Neal Schweighart 26 May 2023 29fe274364d6943a98687912bc9f2e0073aaa2f5 m

Fixed issue with gencal missing from imports
- casatasks/tests/tasks/test_task_gaincal.py (version 29fe274364d6943a98687912bc9f2e0073aaa2f5) (diffs)
Neal Schweighart 26 May 2023 b396e58bf015bf9ea0202e70d129cc20a99835f3 m

Added new case to the gaincal test for bug detected in CAS-14043 where a mismatch of spws in the caltable and ms would cause a segfault
- casatasks/tests/tasks/test_task_gaincal.py (version b396e58bf015bf9ea0202e70d129cc20a99835f3) (diffs)
David Mehringer 25 May 2023 d43909e274ddb42388e7b7f4c679f014d541d83b m

updated test_immath for location of messages in output
- casatasks/tests/tasks/test_task_immath.py (version d43909e274ddb42388e7b7f4c679f014d541d83b) (diffs)
Takeshi Nakazato 24 May 2023 661c8cf5de4a562fd42652186945f8a76d62259e m

added some comments
- casatasks/tests/tasks/test_task_gencal.py (version 661c8cf5de4a562fd42652186945f8a76d62259e) (diffs)
Takeshi Nakazato 24 May 2023 6aa5cf1ebb31d98ff0a4636c2f3e877824aa0bb1 m

CAS-14143 add unit test for pol-dependent jyperk csv file
- casatasks/tests/tasks/test_task_gencal.py (version 6aa5cf1ebb31d98ff0a4636c2f3e877824aa0bb1) (diffs)
Takeshi Nakazato 24 May 2023 3acdd9033f5ec2df3c624da4d96fe50a62298552 m

CAS-14143 properly handle pol-dependent Jy/K factor
- casatasks/src/private/task_gencal.py (version 3acdd9033f5ec2df3c624da4d96fe50a62298552) (diffs)
George Moellenbrock 19 May 2023 ef5537f3c8d3a298e92d2b51aa3173e7aebe2084 m

Merge branch 'master' into CAS-14043
George Moellenbrock 19 May 2023 b100fe9ac8ca1c7f96c44756d5c81a100ddca952 m

For CAS-14071, in KJones.cc, cater for nCalSpw>nMSSpw when filling KrefFreq_ values from caltable (fixes bad memory free)
- casatools/src/code/synthesis/MeasurementComponents/KJones.cc (version b100fe9ac8ca1c7f96c44756d5c81a100ddca952) (diffs)
Akeem Wells 17 May 2023 7344e8b6cc3fd951b0a80d03b3c7daaca6761252 m

Pull request #704: CAS-13935
Merge in CASA/casa6 from CAS-13935 to master

* commit 'cd0a0d2382fcd4208c69410d8290b5dd69ff4394':
  Cleaned up table of contents for README.md
  Update Readme to include how to use sparse_check
  Update path type to checkout files that are real in unittest directory
  Fix error in reading datapaths. Print Help on empty arguments
  Update to Sparse Check to include non unittest dirs. Added simple test cases
  Update checking names of requested data directly
  Add Error Handling if Data file cannot be found
  Update to check for explicit path prior to checking real path
  Add v1 of sparse checkout to casatestutils
Neal Schweighart 16 May 2023 19e8b47f3c686085e06e2b669ed6bb0eae8e5e16 m

changed tb tool call to match others / fixed typo
- casatasks/tests/tasks/test_task_fringefit.py (version 19e8b47f3c686085e06e2b669ed6bb0eae8e5e16) (diffs)
Neal Schweighart 16 May 2023 67b1a0fc22f72a021987e9a1b649099910a5f9e0 m

expanded the test case to include a check for manually setting the paramactive to [T,T,F]
- casatasks/tests/tasks/test_task_fringefit.py (version 67b1a0fc22f72a021987e9a1b649099910a5f9e0) (diffs)
Neal Schweighart 16 May 2023 372bdce06183276e903d7db52cc3a750c21cf4d1 m

fixed typo with table tool command
- casatasks/tests/tasks/test_task_fringefit.py (version 372bdce06183276e903d7db52cc3a750c21cf4d1) (diffs)
smcastro <smcastro@users.noreply.github.com> 16 May 2023 cd0a0d2382fcd4208c69410d8290b5dd69ff4394 m

Cleaned up table of contents for README.md
- casatestutils/README.md (version cd0a0d2382fcd4208c69410d8290b5dd69ff4394) (diffs)
Akeem Wells 16 May 2023 8d2d48b9c24e00484e5ba366b6948cc3f5d9b036 m

Update Readme to include how to use sparse_check
- casatestutils/README.md (version 8d2d48b9c24e00484e5ba366b6948cc3f5d9b036) (diffs)
Neal Schweighart 15 May 2023 bcc344083e4bf4b41c89f0a537940f53d8a3620e m

Merge branch 'master' into CAS-14083
Neal Schweighart 15 May 2023 1deb6c7ab27db9d34de3ffe848d2a59db20a06c7 m

added an explicit statment for paramactive=[]
- casatasks/tests/tasks/test_task_fringefit.py (version 1deb6c7ab27db9d34de3ffe848d2a59db20a06c7) (diffs)
Neal Schweighart 15 May 2023 7b0fbbae903e326a5d18243a9413a49c23707eb1 m

added new test cast to test_task_fringefit that checks for the proper behavior when using the default setting for paramactive for callib
- casatasks/tests/tasks/test_task_fringefit.py (version 7b0fbbae903e326a5d18243a9413a49c23707eb1) (diffs)
Akeem Wells 14 May 2023 adc9b476d77225bae83e3b00c8c88516d61babb7 m

Update path type to checkout files that are real in unittest directory
- casatestutils/casatestutils/sparse_check.py (version adc9b476d77225bae83e3b00c8c88516d61babb7) (diffs)
Akeem Wells 10 May 2023 171af607c2d5e790dc798a0891ea9e06e55933ec m

Fix error in reading datapaths. Print Help on empty arguments
- casatestutils/casatestutils/sparse_check.py (version 171af607c2d5e790dc798a0891ea9e06e55933ec) (diffs)
Akeem Wells 09 May 2023 9bc8304cfe941492848ecbfe92b9f230b0eb360d m

Merge branch 'master' into CAS-13935
David Mehringer 08 May 2023 85ba80833efb19997b13e01b3ecadded2457e6b8 m

added hopefully useful log messages
- casatools/src/tools/image/image_cmpt.cc (version 85ba80833efb19997b13e01b3ecadded2457e6b8) (diffs)
David Mehringer 08 May 2023 e7bde44b5044ba7db82741a28638914d079226de m

bug fix, fix some tests
- casatools/src/tools/image/image_cmpt.cc (version e7bde44b5044ba7db82741a28638914d079226de) (diffs)
- casatools/tests/tools/image/test_tool_image.py (version e7bde44b5044ba7db82741a28638914d079226de) (diffs)
David Mehringer 07 May 2023 2df26b8a849dfe59287c201342ab9ecb2f397c98 m

Modified for new user-based rules
- casatools/src/code/imageanalysis/ImageAnalysis/BeamManipulator.h (version 2df26b8a849dfe59287c201342ab9ecb2f397c98) (diffs)
- casatools/src/code/imageanalysis/ImageAnalysis/BeamManipulator.tcc (version 2df26b8a849dfe59287c201342ab9ecb2f397c98) (diffs)
- casatools/src/tools/image/image_cmpt.cc (version 2df26b8a849dfe59287c201342ab9ecb2f397c98) (diffs)
- casatools/tests/tools/image/test_tool_image.py (version 2df26b8a849dfe59287c201342ab9ecb2f397c98) (diffs)
- casatools/xml/image.xml (version 2df26b8a849dfe59287c201342ab9ecb2f397c98) (diffs)
Urvashi Rao Venkata 06 May 2023 0e7e2e674cc2eb2319f948936387a8a1ab224a69 m

Pull request #703: CAS-13899
Merge in CASA/casa6 from CAS-13899 to master

* commit '9ddfc1d948b0e436b368e1e912796b697398e388':
  Added comments that the reviewer wanted
  added briggs for psfphasecenter cube
  Does a psf fitting post psfphasecenter psfmaking
  Fix for briggs perchanweight mosaic with psfphasecenter
David Mehringer 05 May 2023 c140ed8e86f44e026259da9d757e0d4c1a9f8d0c m

Merge branch 'master' into CAS-12599
David Mehringer 04 May 2023 a0e44b204c74831e10658c2c6b635d7fcda15bbe m

Pull request #702: image.summary() doc fix
Merge in CASA/casa6 from CAS-14121 to master

* commit 'a5132155e1eac0cb17d8e86f1f259ffa4446c09c':
image.summary() doc fix
Darrell Schiebel 03 May 2023 2044e1b9c9823ac8bc9593526c4e3b960f7149f3 m

Pull request #701: CAS-14073
Merge in CASA/casa6 from CAS-14073 to master

* commit '6d0dd92e95d1d9979f84a4459806ae20049e1dfe':
  segv when setting a string error without GIL exclusion [CAS-14073]
  trap bad column name and errors when fetching column values in gitcoliter [CAS-14073]
  escape less than symbol in comment [CAS-14073]
  expand examples based on code review comments [CAS-14073]
  add tests for table.getcoliter(...) [CAS-14073]
  add error message to the PyExc_StopIteration when calls run past the end of the iterator [CAS-14073]
  set python errors instead of throwing exceptions [CAS-14073]
  allow comparisons like "tb.getcol('TIME',0,7) == tb.getcoliter('TIME',0,7)" [CAS-14073]
  allow table objects to be created and used in lambda functions [CAS-14073]
  type errors from 5.3.1 era g++ compilers [CAS-14073]
  MPI-related changes for casacore update [CAS-14073]
  type errors from 5.3.1 era g++ compilers [CAS-14065]
  MPI-related changes for casacore update [CAS-14065]
  Revert "Revert "update casacore to support table.getcoliter(...) [CAS-14073]""
  Revert "Revert "add table.getcoliter(...) + relocate tablerow conversions [CAS-14073]""
David Mehringer 02 May 2023 a5132155e1eac0cb17d8e86f1f259ffa4446c09c m

image.summary() doc fix
- casatools/xml/image.xml (version a5132155e1eac0cb17d8e86f1f259ffa4446c09c) (diffs)
Urvashi R._V <rurvashi@aoc.nrao.edu> 02 May 2023 9ddfc1d948b0e436b368e1e912796b697398e388 m

Merge branch 'master' into CAS-13899
Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 2504ba31f4bc43bc917aac82382eecab89821280 m

Some changes to fix lock and a problem with str + operator issue on mac
- casatasks/src/private/task_msuvbin.py (version 2504ba31f4bc43bc917aac82382eecab89821280) (diffs)
- casatools/src/code/mstransform/MSTransform/MSUVBin.cc (version 2504ba31f4bc43bc917aac82382eecab89821280) (diffs)
- casatools/src/code/mstransform/MSTransform/MSUVBin.h (version 2504ba31f4bc43bc917aac82382eecab89821280) (diffs)
David Mehringer 01 May 2023 7cbe1970f67e079873cf28433ee6b8f924efb08d m

Pull request #698: CAS-13776 enable higher order spectral terms for use in simalma/simobserve
Merge in CASA/casa6 from CAS-13776 to master

* commit 'fd1a8b0a2cbca06d1973a0a0f82d2921feaac38f':
  Update to checkout branch with 'origin' prefix
  remove link from input parameter
  CAS-13776 new test to verify simobserve works with models that vary with frequency
Takahiro Tsutsumi 01 May 2023 61ff0fad41a3c3d7de8880c7e50b8ba540f79bad m

Pull request #700: CAS-13925
Merge in CASA/casa6 from CAS-13925 to master

* commit 'fd02eab554195971c4bb2eb1946c195416d1df32':
  Fix the tests to check the default casalog
  Add resetting of a default casalog file at tearDown
  Remove a debug print statement
  Fix the bug in restting savemodel parameters when vis is a list of MSs. Add two new tests.
Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 89229726c1d56fb2b20e7fd10a099522cf4a3314 m

Merge branch 'CAS-13794' of https://open-bitbucket.nrao.edu/scm/casa/casa6 into CAS-13794
Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 10fef71c5602feab83554abbae8bdbc7cb6e817f m

added a lock release in destructor
- casatools/src/code/mstransform/MSTransform/MSUVBin.cc (version 10fef71c5602feab83554abbae8bdbc7cb6e817f) (diffs)
Takahiro Tsutsumi 28 Apr 2023 fd02eab554195971c4bb2eb1946c195416d1df32 m

Merge branch 'master' into CAS-13925
Ville Suoranta 28 Apr 2023 fd1a8b0a2cbca06d1973a0a0f82d2921feaac38f m

Merge branch 'master' into CAS-13776
Akeem Wells 27 Apr 2023 6f639eb40dd8eeb5f427eba74378efc30f3452a5 m

Update to checkout branch with 'origin' prefix
- casatestutils/runtest.py (version 6f639eb40dd8eeb5f427eba74378efc30f3452a5) (diffs)
Takeshi Nakazato 27 Apr 2023 165a405470b5acb3c92eeb7ce6730da657b24d51 m

CAS-14111 make sure input/output arrays for libsakura functions are aligned
- casatools/src/code/singledish/SingleDish/test/tLineFinder.cc (version 165a405470b5acb3c92eeb7ce6730da657b24d51) (diffs)
Takeshi Nakazato 27 Apr 2023 81061aaaa5b4d93b0c22e8c86b36ecc79b0e21cf m

CAS-14111 updated SakuraAlignedArray API
- casatools/src/code/casa_sakura/SakuraAlignedArray.h (version 81061aaaa5b4d93b0c22e8c86b36ecc79b0e21cf) (diffs)
- casatools/src/code/casa_sakura/SakuraAlignedArray.tcc (version 81061aaaa5b4d93b0c22e8c86b36ecc79b0e21cf) (diffs)
Neal Schweighart 27 Apr 2023 fa3e51fac6ac3e8fc228b1ecd261a7d0923b63dd m

Pull request #697: Added a new row in the weblog that gives the total runtime
Merge in CASA/casa6 from CAS-14123 to master

* commit 'baaad86d1eb65e5fffdc7e08521d717f30683821':
Added a new row in the weblog that gives the total runtime
Takahiro Tsutsumi 27 Apr 2023 d9c85a2e94a5ba1a8546f80b1063613b79f192bb m

Pull request #699: CAS-13832
Merge in CASA/casa6 from CAS-13832 to master

* commit '3f42f8ce97b41a9106ab4f64c8342857555568f7': (27 commits)
  Add vlass stk tests v1.2
  Fix the mask name modification in test_j1927_mosaic_cube
  Modify each test to use unique imagenames and mask names
  Change each test to use unique imagenames
  Updated rmses for the QUICK TEST for test_j1302_awproject using the values from the quick test tt0 and tt1 images from CASA6.5.3 run.
  Update the check_metrics_alpha calls
  Fix the error estimate of alpha in check_metrics_alpha to use the correct definition.
  A minor typo fix
  Change interactive=0 to interactive=False
  Modify delData so that the input MS is deleted for all cases and add minor tweeks in values of mom8_creator calls
  Fix the name of the input MS data for test_j1302 passes to a weblog
  Add scaling to mom8_creator. Modify setUpClass not to remove png files.
  Removed metrics for runtime because they are highly dependable on when and where the tests are run.
  CAS-13832 build webdocs
  CAS-13832 generating moment 8 images
  CAS-13832 start working on images
  Don't count a runtime shorter than expected as a failure.
  CAS-13832 fix ordering of names in beam values dictionaries, don't use on-axis values that aren't currently passing
  CAS-13832 update vlass tests v1.2 to use values from casa 6.2 to compare against, as specified by John Tobin's comment "we likely need to adopt the values from CASA 6.2 (or the current CASA)"
  CAS-13832 only print the failing log lines
  ...
Urvashi R._V <rurvashi@aoc.nrao.edu> 26 Apr 2023 d2997ae7b5f9de2ca269d9251b01e24db3218c55 m

CAS-13794 : Tool instantiation fix in tool test
- casatools/tests/tools/msuvbinner/test_tool_msuvbinner.py (version d2997ae7b5f9de2ca269d9251b01e24db3218c55) (diffs)
Ville Suoranta 25 Apr 2023 15ad74e77e53c502d37f7fe9267ba2fb740023bb m

Trigger a build
- readme.md (version 15ad74e77e53c502d37f7fe9267ba2fb740023bb) (diffs)
Urvashi R._V <rurvashi@aoc.nrao.edu> 25 Apr 2023 911de894c961b2659ea49a143383f24222b30e4e m

CAS-13794 : Fixed tool instantiation call inside task_msuvbin.py
- casatasks/src/private/task_msuvbin.py (version 911de894c961b2659ea49a143383f24222b30e4e) (diffs)
Urvashi R._V <rurvashi@aoc.nrao.edu> 25 Apr 2023 393f68ab747e0b3c58b3b4157b7326ca6b746575 m

Merge branch 'master' into CAS-13794
Darrell Schiebel <darrell@schiebel.us> 25 Apr 2023 6d0dd92e95d1d9979f84a4459806ae20049e1dfe m

Merge branch 'master' into CAS-14073
Neal Schweighart 24 Apr 2023 baaad86d1eb65e5fffdc7e08521d717f30683821 m

Added a new row in the weblog that gives the total runtime
- casatestutils/casatestutils/weblog.py (version baaad86d1eb65e5fffdc7e08521d717f30683821) (diffs)
Takeshi Nakazato 21 Apr 2023 18fc9892844658a0f14f6d6996103c1b668fd1c7 m

Merge branch 'master' into CAS-14096
David Mehringer 20 Apr 2023 1c847c52f50159f7fce1494aad6e72f835c03f2e m

Pull request #696: CAS-13827 for targetres=True, write requested, not fitted, beam to metadata
Merge in CASA/casa6 from CAS-13827 to master

* commit 'a0c6af29ee53f8f07c7bb7c5450b2eaced00da32':
  updated GaussianBeam construction issues, casacore types -> C++ primitives
  add test to verify correct beam is place in metadata
  change log priority of new messages from INFO to WARN
  CAS-13827, for targetres=True, write requested, not fitted, beam to metadata
Takahiro Tsutsumi 19 Apr 2023 3f42f8ce97b41a9106ab4f64c8342857555568f7 m

Add vlass stk tests v1.2
- casatestutils/casatestutils/component_to_test_map.json (version 3f42f8ce97b41a9106ab4f64c8342857555568f7) (diffs)
David Mehringer 19 Apr 2023 a0c6af29ee53f8f07c7bb7c5450b2eaced00da32 m

updated GaussianBeam construction issues, casacore types -> C++ primitives
- casatools/src/code/imageanalysis/ImageAnalysis/Image2DConvolver.tcc (version a0c6af29ee53f8f07c7bb7c5450b2eaced00da32) (diffs)
David Mehringer 19 Apr 2023 9d29d6c9723d87ad807b11653c5617f3def87b1b m

Merge branch 'master' into CAS-13776
David Mehringer 19 Apr 2023 d7753ce49e55ff30bb750c7a890d60a638eeefab m

remove link from input parameter
- casatasks/xml/simobserve.xml (version d7753ce49e55ff30bb750c7a890d60a638eeefab) (diffs)
Takahiro Tsutsumi 19 Apr 2023 ff6488857541a4347080dbf34efe6cb8c861292d m

Merge branch 'master' into CAS-13832
Darrell Schiebel <darrell@schiebel.us> 18 Apr 2023 a37a3da57875355881daaae9cb2508d30350ef46 m

Merge branch 'master' into CAS-14073
Ville Suoranta 18 Apr 2023 4c7f63f9568cccef363f01b15cf0f9559c132b68 m

Merge branch 'master' into CAS-13827
Darrell Schiebel <darrell@schiebel.us> 17 Apr 2023 655b8a0f80fede47f25d8cac1e1bd2202f303b71 m

segv when setting a string error without GIL exclusion [CAS-14073]
- casatools/src/tools/table/table_getcoliter.cc (version 655b8a0f80fede47f25d8cac1e1bd2202f303b71) (diffs)
- casatools/tests/tools/table/test_tool_table.py (version 655b8a0f80fede47f25d8cac1e1bd2202f303b71) (diffs)
Takeshi Nakazato 14 Apr 2023 e386253bde207f133f6b411664514aeb9aeb86d1 m

CAS-14096 apply the same fix to similar code
- casatasks/src/private/task_plotbandpass.py (version e386253bde207f133f6b411664514aeb9aeb86d1) (diffs)
Kumar Golap 13 Apr 2023 570da913d62a2c0a7e6046df68fa4534af35ef3d m

Made the changes as requested by the testers i.e having flagbackup and mode which can be 'bin' or 'write_flags_back'
- casatasks/src/private/task_msuvbin.py (version 570da913d62a2c0a7e6046df68fa4534af35ef3d) (diffs)
- casatasks/xml/msuvbin.xml (version 570da913d62a2c0a7e6046df68fa4534af35ef3d) (diffs)
- casatools/src/code/mstransform/MSTransform/MSUVBin.cc (version 570da913d62a2c0a7e6046df68fa4534af35ef3d) (diffs)
- casatools/src/code/mstransform/MSTransform/MSUVBin.h (version 570da913d62a2c0a7e6046df68fa4534af35ef3d) (diffs)
Kumar Golap <kgolap@tizan.aoc.nrao.edu> 12 Apr 2023 541cc7115e86533947a0bbf8dfdf8fc1303982ec m

changes to make it work with modular system
- casatools/src/tools/CMakeLists.txt (version 541cc7115e86533947a0bbf8dfdf8fc1303982ec) (diffs)
- casatools/src/tools/msuvbinner/msuvbinner_cmpt.cc (version 541cc7115e86533947a0bbf8dfdf8fc1303982ec) (diffs)
Kumar Golap <kgolap@localhost.localdomain> 11 Apr 2023 312fa8f629364e7974457666cf98ca2f848c7b24 m

Merge branch 'CAS-13857' into CAS-13794
Kumar Golap 10 Apr 2023 b45b9190aa15b351f2fd8eaa34f2355cac9ba6be m

Merge branch 'master' into CAS-13794
Takeshi Nakazato 04 Apr 2023 f2705f34cd0ba27cb4c835739a7aac0c2c05839e m

CAS-14096 insert extra condition suggested by Todd Hunter
- casatasks/src/private/task_plotbandpass.py (version f2705f34cd0ba27cb4c835739a7aac0c2c05839e) (diffs)
Darrell Schiebel <darrell@schiebel.us> 29 Mar 2023 fb06fd8ef8fc2d95de37af16d5d04b84f88cb1a3 m

trap bad column name and errors when fetching column values in gitcoliter [CAS-14073]
- casatools/src/tools/table/table_getcoliter.cc (version fb06fd8ef8fc2d95de37af16d5d04b84f88cb1a3) (diffs)
- casatools/tests/tools/table/test_tool_table.py (version fb06fd8ef8fc2d95de37af16d5d04b84f88cb1a3) (diffs)
Takahiro Tsutsumi 24 Mar 2023 54a7748d1d48152c406d1b38f022070358ca67e8 m

Merge branch 'master' into CAS-13832
Takahiro Tsutsumi 21 Mar 2023 6465b89e9c8344d1fcf71bfee3925362c8737355 m

Fix the mask name modification in test_j1927_mosaic_cube
- casatests/stakeholder/test_stk_vlass_pipeline_imaging_1v2.py (version 6465b89e9c8344d1fcf71bfee3925362c8737355) (diffs)
Takahiro Tsutsumi 19 Mar 2023 9b5ff5e0c84361c55e062cac2aaf1803e74d25b9 m

Modify each test to use unique imagenames and mask names
- casatests/stakeholder/test_stk_vlass_pipeline_imaging_1v2.py (version 9b5ff5e0c84361c55e062cac2aaf1803e74d25b9) (diffs)
Takahiro Tsutsumi 17 Mar 2023 c80ced8dbc8ce0b67fa61c8cc39e6cadb60d3ffc m

Change each test to use unique imagenames
- casatests/stakeholder/test_stk_vlass_pipeline_imaging_1v2.py (version c80ced8dbc8ce0b67fa61c8cc39e6cadb60d3ffc) (diffs)
Des Small 17 Mar 2023 e0e774c921b4c10dcd3819e25b05c027e3925e92 m

Fixing a bug in task_fringefit.py so that callib works
- casatasks/src/private/task_fringefit.py (version e0e774c921b4c10dcd3819e25b05c027e3925e92) (diffs)
Darrell Schiebel <darrell@schiebel.us> 14 Mar 2023 4174888be72e61c523962e9d0f829cc110e328b8 m

escape less than symbol in comment [CAS-14073]
- casatools/xml/table.xml (version 4174888be72e61c523962e9d0f829cc110e328b8) (diffs)
Darrell Schiebel <darrell@schiebel.us> 14 Mar 2023 d9bce56ab686a70527cdc3666abb64d794ce992d m

Merge branch 'master' into CAS-14073
Takahiro Tsutsumi 14 Mar 2023 023c25925e2521de67e44b7e7e4d2f6b26a23e61 m

Updated rmses for the QUICK TEST for test_j1302_awproject using the values from the quick test tt0 and tt1 images from CASA6.5.3 run.
- casatests/stakeholder/test_stk_vlass_pipeline_imaging_1v2.py (version 023c25925e2521de67e44b7e7e4d2f6b26a23e61) (diffs)
Darrell Schiebel <darrell@schiebel.us> 14 Mar 2023 fb06d6d583591f55be39518427effc50185b92f2 m

expand examples based on code review comments [CAS-14073]
- casatools/xml/table.xml (version fb06d6d583591f55be39518427effc50185b92f2) (diffs)
Akeem Wells 14 Mar 2023 8216213692122af9e497d7c32e597696215c2817 m

Update to Sparse Check to include non unittest dirs. Added simple test cases
- casatestutils/casatestutils/sparse_check.py (version 8216213692122af9e497d7c32e597696215c2817) (diffs)
- casatestutils/tests/test_testutils_sparse_check.py (version 8216213692122af9e497d7c32e597696215c2817) (diffs)

Build #2

Build: #2 was successful Changes by Sandra Castro

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Code commits

casa6

Sandra Castro 28 Jun 2023 f704e4b257aaf7b46a6d8b2ff515a9272afcb8cf

Urvashi Rao Venkata 27 Jun 2023 a6be85d6a7e7e8ffb68c823b5ed4611b1c956f9b m

David Mehringer 22 Jun 2023 a943bb15f31c2f1966b3b71b776c77fb3f74d357 m

Akeem Wells 21 Jun 2023 69eeccb9bf592927e42ff7423141330965e5c886 m

Akeem Wells 19 Jun 2023 73e287052a3a84b4067d140e36fb92cfa2f3e73d m

Akeem Wells 16 Jun 2023 39f31b9dbab7e7a15cf46e8a717c03270e42cac7 m

Akeem Wells 15 Jun 2023 77e6ac04dadf4dbd19764cf051eba25b69cfdbc1 m

Kumar Golap 15 Jun 2023 91e3323e6a22c8e58a64e4ea3b869709ff4ed3a2 m

Urvashi Rao Venkata 15 Jun 2023 b5b1671a02b019333d1d6331b006285a7e2446aa m

Urvashi R._V <rurvashi@aoc.nrao.edu> 15 Jun 2023 d745dbc09eca3d2ad9b1326728116264161924de m

Kumar Golap <kgolap@tizan.aoc.nrao.edu> 14 Jun 2023 6616d0baceedd84211d035c4bdd32c35bf0c2267 m

Urvashi R._V <rurvashi@aoc.nrao.edu> 13 Jun 2023 ff7fb893179694b582149078f18b6ccc916804e0 m

David Mehringer 12 Jun 2023 ada015dda0a27e745307f4848543937017283d2a m

David Mehringer 12 Jun 2023 2863e78d3855162ecb19c5d73884fcaf5391717a m

Takeshi Nakazato 12 Jun 2023 913367647c525e2ab4fe123510f0d838e6971b11 m

Takeshi Nakazato 12 Jun 2023 858b6cb67c734de6206d78ec0013811e646a0f0f m

Takeshi Nakazato 07 Jun 2023 974414231b5a61b1e203c695543dd667c0939f91 m

Takeshi Nakazato 06 Jun 2023 404299c4ede09576d22f0721b0103320933ad9f2 m

Kumar Golap <kgolap@tizan.aoc.nrao.edu> 05 Jun 2023 685c3bce276093e1f5ebb215cef53e71c342fb77 m

Des Small 05 Jun 2023 105035817ac05e5e71902d3ed4fc74c99448d6cc m

Takeshi Nakazato 31 May 2023 1ff88274e4ff469089e9bdba74125d8fcb0cc0fe m

Takeshi Nakazato 31 May 2023 c34f88965fcd9ae66cb36480b48cc48af8dbbd57 m

Takeshi Nakazato 31 May 2023 dc7116090fa9f3cdeae9e096fb47fbcad2bfc4b2 m

Neal Schweighart 30 May 2023 8c01fdd26b89a4479fda63e69c73c9a082c3b80e m

Takeshi Nakazato 30 May 2023 07e43511a0b13e7cbd179ec0a59fd9e67091c1df m

Takeshi Nakazato 29 May 2023 8c8caf0574f0e6653890d9b473ba4b499f858582 m

Neal Schweighart 26 May 2023 29fe274364d6943a98687912bc9f2e0073aaa2f5 m

Neal Schweighart 26 May 2023 b396e58bf015bf9ea0202e70d129cc20a99835f3 m

David Mehringer 25 May 2023 d43909e274ddb42388e7b7f4c679f014d541d83b m

Takeshi Nakazato 24 May 2023 661c8cf5de4a562fd42652186945f8a76d62259e m

Takeshi Nakazato 24 May 2023 6aa5cf1ebb31d98ff0a4636c2f3e877824aa0bb1 m

Takeshi Nakazato 24 May 2023 3acdd9033f5ec2df3c624da4d96fe50a62298552 m

George Moellenbrock 19 May 2023 ef5537f3c8d3a298e92d2b51aa3173e7aebe2084 m

George Moellenbrock 19 May 2023 b100fe9ac8ca1c7f96c44756d5c81a100ddca952 m

Akeem Wells 17 May 2023 7344e8b6cc3fd951b0a80d03b3c7daaca6761252 m

Neal Schweighart 16 May 2023 19e8b47f3c686085e06e2b669ed6bb0eae8e5e16 m

Neal Schweighart 16 May 2023 67b1a0fc22f72a021987e9a1b649099910a5f9e0 m

Neal Schweighart 16 May 2023 372bdce06183276e903d7db52cc3a750c21cf4d1 m

smcastro <smcastro@users.noreply.github.com> 16 May 2023 cd0a0d2382fcd4208c69410d8290b5dd69ff4394 m

Akeem Wells 16 May 2023 8d2d48b9c24e00484e5ba366b6948cc3f5d9b036 m

Neal Schweighart 15 May 2023 bcc344083e4bf4b41c89f0a537940f53d8a3620e m

Neal Schweighart 15 May 2023 1deb6c7ab27db9d34de3ffe848d2a59db20a06c7 m

Neal Schweighart 15 May 2023 7b0fbbae903e326a5d18243a9413a49c23707eb1 m

Akeem Wells 14 May 2023 adc9b476d77225bae83e3b00c8c88516d61babb7 m

Akeem Wells 10 May 2023 171af607c2d5e790dc798a0891ea9e06e55933ec m

Akeem Wells 09 May 2023 9bc8304cfe941492848ecbfe92b9f230b0eb360d m

David Mehringer 08 May 2023 85ba80833efb19997b13e01b3ecadded2457e6b8 m

David Mehringer 08 May 2023 e7bde44b5044ba7db82741a28638914d079226de m

David Mehringer 07 May 2023 2df26b8a849dfe59287c201342ab9ecb2f397c98 m

Urvashi Rao Venkata 06 May 2023 0e7e2e674cc2eb2319f948936387a8a1ab224a69 m

David Mehringer 05 May 2023 c140ed8e86f44e026259da9d757e0d4c1a9f8d0c m

David Mehringer 04 May 2023 a0e44b204c74831e10658c2c6b635d7fcda15bbe m

Darrell Schiebel 03 May 2023 2044e1b9c9823ac8bc9593526c4e3b960f7149f3 m

David Mehringer 02 May 2023 a5132155e1eac0cb17d8e86f1f259ffa4446c09c m

Urvashi R._V <rurvashi@aoc.nrao.edu> 02 May 2023 9ddfc1d948b0e436b368e1e912796b697398e388 m

Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 2504ba31f4bc43bc917aac82382eecab89821280 m

David Mehringer 01 May 2023 7cbe1970f67e079873cf28433ee6b8f924efb08d m

Takahiro Tsutsumi 01 May 2023 61ff0fad41a3c3d7de8880c7e50b8ba540f79bad m

Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 89229726c1d56fb2b20e7fd10a099522cf4a3314 m

Kumar Golap <kgolap@localhost.localdomain> 01 May 2023 10fef71c5602feab83554abbae8bdbc7cb6e817f m

Takahiro Tsutsumi 28 Apr 2023 fd02eab554195971c4bb2eb1946c195416d1df32 m

Ville Suoranta 28 Apr 2023 fd1a8b0a2cbca06d1973a0a0f82d2921feaac38f m

Akeem Wells 27 Apr 2023 6f639eb40dd8eeb5f427eba74378efc30f3452a5 m

Takeshi Nakazato 27 Apr 2023 165a405470b5acb3c92eeb7ce6730da657b24d51 m

Takeshi Nakazato 27 Apr 2023 81061aaaa5b4d93b0c22e8c86b36ecc79b0e21cf m

Neal Schweighart 27 Apr 2023 fa3e51fac6ac3e8fc228b1ecd261a7d0923b63dd m

Takahiro Tsutsumi 27 Apr 2023 d9c85a2e94a5ba1a8546f80b1063613b79f192bb m

Urvashi R._V <rurvashi@aoc.nrao.edu> 26 Apr 2023 d2997ae7b5f9de2ca269d9251b01e24db3218c55 m

Ville Suoranta 25 Apr 2023 15ad74e77e53c502d37f7fe9267ba2fb740023bb m

Urvashi R._V <rurvashi@aoc.nrao.edu> 25 Apr 2023 911de894c961b2659ea49a143383f24222b30e4e m

Urvashi R._V <rurvashi@aoc.nrao.edu> 25 Apr 2023 393f68ab747e0b3c58b3b4157b7326ca6b746575 m

Darrell Schiebel <darrell@schiebel.us> 25 Apr 2023 6d0dd92e95d1d9979f84a4459806ae20049e1dfe m