Build: #3 was successful
Job: Old CMake build ManyLinux2014 was successful
Job result summary
- Completed
- Duration
- 45 minutes
- Agent
- cbt-el7-6.cv.nrao.edu
- Total tests
- 670
- Successful since
- #2 ()
- Number of retries
- 1
Tests
- 670 tests in total
- 4 tests were quarantined / skipped
- 11 minutes taken in total.
Error summary
The build generated some errors. See the full build log for more details.
mkdir: cannot create directory ‘/export/home/cbt-el7-6/bamboohome/xml-data/build-dir/CASA-CMAKECI1-CBM2014/../ccache_cmake_2014’: File exists
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Switched to a new branch 'CAS-13970'
Switched to a new branch 'CAS-13970'
/bin/bash: line 0: cd: /opt/_internal/certs.pem: Not a directory
Connecting to codeload.github.com (codeload.github.com)|140.82.113.9|:443... connected.
HTTP request sent, awaiting response... 200 OK
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CMake Deprecation Warning at CMakeLists.txt:24 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Deprecation Warning at src/CMakeLists.txt:24 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Warning (dev) at src/CMakeLists.txt:26 (project):
Policy CMP0048 is not set: project() command manages VERSION variables.
Run "cmake --help-policy CMP0048" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The following variable(s) would be set to empty:
libsakura_VERSION_MAJOR
libsakura_VERSION_MINOR
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /opt/_internal/pipx/venvs/cmake/lib/python3.9/site-packages/cmake/data/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:438 (message):
The package name passed to `find_package_handle_standard_args` (EIGEN3)
does not match the name of the calling package (Eigen3). This can lead to
problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake-modules/FindEigen3.cmake:16 (find_package_handle_standard_args)
src/CMakeLists.txt:29 (find_package)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /opt/_internal/pipx/venvs/cmake/lib/python3.9/site-packages/cmake/data/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:438 (message):
The package name passed to `find_package_handle_standard_args` (LOG4CXX)
does not match the name of the calling package (Log4Cxx). This can lead to
problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake-modules/FindLog4Cxx.cmake:5 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
src/CMakeLists.txt:30 (find_package)
This warning is for project developers. Use -Wno-dev to suppress it.
CMAKE_BUILD_TYPE is
CMAKE_CXX_COMPILER_ID is GNU
SIMD_ARCH is GENERIC
CMAKE_CXX_FLAGS is -I/data/build/sakurabuild/bin -I/data/source/sakurasource/sakura-libsakura-5.1.3/libsakura/src -std=c++11 -I/usr/include/eigen3 -I/usr/include -m64 -Wall -Wno-deprecated-register -fPIC -pipe
default CMAKE_CXX_FLAGS_RELEASE is -O3 -DNDEBUG
default CMAKE_CXX_FLAGS_DEBUG is -g
CMAKE_CXX_FLAGS_RELEASE was set to -funroll-all-loops -O3 -DNDEBUG
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 19.4M 0 30864 0 0 23404 0 0:14:30 0:00:01 0:14:29 23452
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89 19.4M 89 17.3M 0 0 2433k 0 0:00:08 0:00:07 0:00:01 3134k
100 19.4M 100 19.4M 0 0 2516k 0 0:00:07 0:00:07 --:--:-- 3229k
Boost testing framework not found.
CMake Warning:
Manually-specified variables were not used by the project:
GSL_CBLAS_LIBRARY
GSL_LIBRARY
CASACPP version: 6.5.3.9
CMake Warning:
Manually-specified variables were not used by the project:
GSL_CONFIG
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::numpy2vector(PyArrayObject*, std::vector<casac::complex>&, std::vector<long int>&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:308:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
308 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:353:1: note: in expansion of macro ‘NUMPY2VECTOR’
353 | NUMPY2VECTOR(casac::complex,casac::complex,npy_cdouble,(PyArray_TYPE((PyArrayObject*)obj) == NPY_CDOUBLE),? 1 : 0,COPY_CCOMPLEX,stringtoccomplex,CPXTOCCOMPLEX,DOCOMPLEX,,,,,(*to).re = (*from).real; (*to).im = (*from).imag,1)
| ^~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::numpy2vector(PyArrayObject*, std::vector<std::basic_string<char> >&, std::vector<long int>&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:308:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
308 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:354:1: note: in expansion of macro ‘NUMPY2VECTOR’
354 | NUMPY2VECTOR(std::string,char,const char,(false),,COPY_PYNSTRING,,,NODOCOMPLEX,booltostring,inttostring,doubletostring,complextostring,*to = *from,itemsize)
| ^~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::pyobj2variant(PyObject*, casac::variant&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:766:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
766 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1041:5: note: in expansion of macro ‘HANDLE_NUMPY_ARRAY’
1041 | HANDLE_NUMPY_ARRAY \
| ^~~~~~~~~~~~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1086:5: note: in expansion of macro ‘PYOBJ2VARIANT’
1086 | PYOBJ2VARIANT(result.push,,false)
| ^~~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘casac::variant casac::pyobj2variant(PyObject*, bool)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:766:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
766 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1041:5: note: in expansion of macro ‘HANDLE_NUMPY_ARRAY’
1041 | HANDLE_NUMPY_ARRAY \
| ^~~~~~~~~~~~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1241:5: note: in expansion of macro ‘PYOBJ2VARIANT’
1241 | PYOBJ2VARIANT(return variant,,throw_error)
| ^~~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/MeasurementEquations/Imager.h:44,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/linearmosaic/linearmosaic_cmpt.cc:17:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1948,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/tablerow/tablerow_cmpt.cc:32:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/MeasurementEquations/Imager.h:44,
from /data/install/include/casacpp/synthesis/MeasurementEquations/ImagerMultiMS.h:31,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/imager/imager_cmpt.cc:17:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/ImagerObjects/SIMapper.h:40,
from /data/install/include/casacpp/synthesis/ImagerObjects/SIMapperCollection.h:38,
from /data/install/include/casacpp/synthesis/ImagerObjects/SynthesisImager.h:39,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/synthesisimager/synthesisimager_cmpt.cc:22:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_4' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_5' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_6' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_0' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_1' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 3arcmin
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_2' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 3arcmin
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_3' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 180000marcsec
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_4' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO ImageFactory::createImage Created Temp image of shape [50, 50, 1000] with float valued pixels.
2022-10-28 17:36:58 INFO PVGenerator::generate Rotating image by -45 degrees about direction coordinate pixel (7.5, 7.5) to align specified slice with the x axis
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [0, 0, 0] to [49, 49, 999] (03:01:57.530, -35.32.49.013, 1.4145e+09Hz to 02:57:58.673, -34.43.38.701, 1.4155e+09Hz)
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Rotating DirectionCoordinate holding axes [0, 1]
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS No directional region specified. Using full positional plane.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using all spectral channels.
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created and initialized mask `mask0'
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created mask `mask0'
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [4, 7, 0] to [11, 7, 999] (03:01:31.077, -35.28.09.040, 1.4145e+09Hz to 03:01:06.781, -35.23.12.033, 1.4155e+09Hz)
2022-10-28 17:36:58 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:58 INFO name:: No table opened.
2022-10-28 17:36:58 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:58 INFO ImageFactory::createImage Created Paged image 'maskim' of shape [200, 200, 1, 1] with float valued pixels.
2022-10-28 17:36:58 INFO ImageFactory::createImage Created Paged image 'kk' of shape [200, 200, 1, 20] with float valued pixels.
2022-10-28 17:36:58 SEVERE image::pv (file /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/image/image_cmpt.cc, line 4856) Exception Reported: The input image shape ([200, 200, 1, 20]) and mask shape ([200, 200, 1, 1]) are different, and it was specified that the mask should not be extended, so the mask cannot be applied to the (sub)image. Specifying that the mask should be extended may resolve the issue at File: /data/install/include/casacpp/imageanalysis/ImageAnalysis/SubImageFactory.tcc, line: 306
2022-10-28 17:36:58 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [2, 2, 0, 0] to [20, 2, 0, 19] (00:06:32.213, -01.38.00.797, I, 1.41499e+09Hz to 00:05:20.159, -01.38.00.797, I, 1.41501e+09Hz)
2022-10-28 17:36:58 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS No directional region specified. Using full positional plane.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using all spectral channels.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using polarizations ALL
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created mask `mask0'
2022-10-28 17:36:58 INFO name:: No table opened.
2022-10-28 17:36:58 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:59 WARN componentlist::close componentlist closed
2022-10-28 17:36:59 WARN componentlist::close componentlist closed
2022-10-28 17:36:59 INFO componentlist::summarize SUMMARY OF COMPONENT
2022-10-28 17:36:59 INFO componentlist::summarize+ Shape: Gaussian
2022-10-28 17:36:59 INFO componentlist::summarize+ Flux density: [(1,0), (0,0), (0,0), (0,0)] Jy +/- [(0,0), (0,0), (0,0), (0,0)]
2022-10-28 17:36:59 INFO componentlist::summarize+ Spectral model: Constant
2022-10-28 17:36:59 INFO componentlist::summarize+ Position: Position ---
2022-10-28 17:36:59 INFO componentlist::summarize+ --- long: 10:30:00.000 (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- lat: - 20.00.00.00 (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+
2022-10-28 17:36:59 INFO componentlist::summarize+ Size:
2022-10-28 17:36:59 INFO componentlist::summarize+ --- major axis FWHM: 4.00 arcsec (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- minor axis FWHM: 2.00 arcsec (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- position angle: 30.0deg (fixed)
2022-10-28 17:36:59 SEVERE componentlist::summarize Exception Reported: List has only 1 components, but zero-based component 1 specified. Please specify a component less than 1
Traceback (most recent call last):
File "runtest.py", line 613, in run
shutil.copy2("{}{}.py".format(workdir + "tests/",test), workdir + "{}/".format(test if not test.endswith(".py") else test[:-3]))
File "/usr/local/lib/python3.8/shutil.py", line 435, in copy2
copyfile(src, dst, follow_symlinks=follow_symlinks)
File "/usr/local/lib/python3.8/shutil.py", line 264, in copyfile
with open(src, 'rb') as fsrc, open(dst, 'wb') as fdst:
FileNotFoundError: [Errno 2] No such file or directory: '/data/source/casa6/casatestutils/nosedir/tests/test_tool_image_fromcomplist.py'
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Switched to a new branch 'CAS-13970'
Switched to a new branch 'CAS-13970'
/bin/bash: line 0: cd: /opt/_internal/certs.pem: Not a directory
Connecting to codeload.github.com (codeload.github.com)|140.82.113.9|:443... connected.
HTTP request sent, awaiting response... 200 OK
Length: unspecified [application/x-gzip]
Saving to: ‘libsakura-5.1.3.tar.gz’
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CMake Deprecation Warning at CMakeLists.txt:24 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Deprecation Warning at src/CMakeLists.txt:24 (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Warning (dev) at src/CMakeLists.txt:26 (project):
Policy CMP0048 is not set: project() command manages VERSION variables.
Run "cmake --help-policy CMP0048" for policy details. Use the cmake_policy
command to set the policy and suppress this warning.
The following variable(s) would be set to empty:
libsakura_VERSION_MAJOR
libsakura_VERSION_MINOR
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /opt/_internal/pipx/venvs/cmake/lib/python3.9/site-packages/cmake/data/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:438 (message):
The package name passed to `find_package_handle_standard_args` (EIGEN3)
does not match the name of the calling package (Eigen3). This can lead to
problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake-modules/FindEigen3.cmake:16 (find_package_handle_standard_args)
src/CMakeLists.txt:29 (find_package)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /opt/_internal/pipx/venvs/cmake/lib/python3.9/site-packages/cmake/data/share/cmake-3.22/Modules/FindPackageHandleStandardArgs.cmake:438 (message):
The package name passed to `find_package_handle_standard_args` (LOG4CXX)
does not match the name of the calling package (Log4Cxx). This can lead to
problems in calling code that expects `find_package` result variables
(e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
cmake-modules/FindLog4Cxx.cmake:5 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
src/CMakeLists.txt:30 (find_package)
This warning is for project developers. Use -Wno-dev to suppress it.
CMAKE_BUILD_TYPE is
CMAKE_CXX_COMPILER_ID is GNU
SIMD_ARCH is GENERIC
CMAKE_CXX_FLAGS is -I/data/build/sakurabuild/bin -I/data/source/sakurasource/sakura-libsakura-5.1.3/libsakura/src -std=c++11 -I/usr/include/eigen3 -I/usr/include -m64 -Wall -Wno-deprecated-register -fPIC -pipe
default CMAKE_CXX_FLAGS_RELEASE is -O3 -DNDEBUG
default CMAKE_CXX_FLAGS_DEBUG is -g
CMAKE_CXX_FLAGS_RELEASE was set to -funroll-all-loops -O3 -DNDEBUG
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 19.4M 0 30864 0 0 23404 0 0:14:30 0:00:01 0:14:29 23452
10 19.4M 10 2143k 0 0 925k 0 0:00:21 0:00:02 0:00:19 926k
25 19.4M 25 5012k 0 0 1520k 0 0:00:13 0:00:03 0:00:10 1521k
40 19.4M 40 7968k 0 0 1855k 0 0:00:10 0:00:04 0:00:06 1856k
55 19.4M 55 10.7M 0 0 2077k 0 0:00:09 0:00:05 0:00:04 2207k
71 19.4M 71 13.8M 0 0 2253k 0 0:00:08 0:00:06 0:00:02 2842k
89 19.4M 89 17.3M 0 0 2433k 0 0:00:08 0:00:07 0:00:01 3134k
100 19.4M 100 19.4M 0 0 2516k 0 0:00:07 0:00:07 --:--:-- 3229k
Boost testing framework not found.
CMake Warning:
Manually-specified variables were not used by the project:
GSL_CBLAS_LIBRARY
GSL_LIBRARY
CASACPP version: 6.5.3.9
CMake Warning:
Manually-specified variables were not used by the project:
GSL_CONFIG
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::numpy2vector(PyArrayObject*, std::vector<casac::complex>&, std::vector<long int>&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:308:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
308 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:353:1: note: in expansion of macro ‘NUMPY2VECTOR’
353 | NUMPY2VECTOR(casac::complex,casac::complex,npy_cdouble,(PyArray_TYPE((PyArrayObject*)obj) == NPY_CDOUBLE),? 1 : 0,COPY_CCOMPLEX,stringtoccomplex,CPXTOCCOMPLEX,DOCOMPLEX,,,,,(*to).re = (*from).real; (*to).im = (*from).imag,1)
| ^~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::numpy2vector(PyArrayObject*, std::vector<std::basic_string<char> >&, std::vector<long int>&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:308:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
308 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:354:1: note: in expansion of macro ‘NUMPY2VECTOR’
354 | NUMPY2VECTOR(std::string,char,const char,(false),,COPY_PYNSTRING,,,NODOCOMPLEX,booltostring,inttostring,doubletostring,complextostring,*to = *from,itemsize)
| ^~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘void casac::pyobj2variant(PyObject*, casac::variant&)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:766:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
766 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1041:5: note: in expansion of macro ‘HANDLE_NUMPY_ARRAY’
1041 | HANDLE_NUMPY_ARRAY \
| ^~~~~~~~~~~~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1086:5: note: in expansion of macro ‘PYOBJ2VARIANT’
1086 | PYOBJ2VARIANT(result.push,,false)
| ^~~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc: In function ‘casac::variant casac::pyobj2variant(PyObject*, bool)’:
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:766:10: warning: ‘NPY_CHAR’ is deprecated: Use NPY_STRING [-Wdeprecated-declarations]
766 | case NPY_CHAR: \
| ^~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1041:5: note: in expansion of macro ‘HANDLE_NUMPY_ARRAY’
1041 | HANDLE_NUMPY_ARRAY \
| ^~~~~~~~~~~~~~~~~~
/tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:1241:5: note: in expansion of macro ‘PYOBJ2VARIANT’
1241 | PYOBJ2VARIANT(return variant,,throw_error)
| ^~~~~~~~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/../../binding/include/swigconvert_python.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/binding/source/conversions_python.cc:3:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:84:21: note: declared here
84 | NPY_CHAR NPY_ATTR_DEPRECATE("Use NPY_STRING"),
| ^~~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/MeasurementEquations/Imager.h:44,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/linearmosaic/linearmosaic_cmpt.cc:17:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
In file included from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarraytypes.h:1948,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/arrayobject.h:5,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/tablerow/tablerow_cmpt.cc:32:
/usr/local/lib/python3.8/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/MeasurementEquations/Imager.h:44,
from /data/install/include/casacpp/synthesis/MeasurementEquations/ImagerMultiMS.h:31,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/imager/imager_cmpt.cc:17:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
In file included from /data/install/include/casacpp/synthesis/Utilities/FFT2D.h:31,
from /data/install/include/casacpp/synthesis/TransformMachines/FTMachine.h:48,
from /data/install/include/casacpp/synthesis/ImagerObjects/SIMapper.h:40,
from /data/install/include/casacpp/synthesis/ImagerObjects/SIMapperCollection.h:38,
from /data/install/include/casacpp/synthesis/ImagerObjects/SynthesisImager.h:39,
from /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/synthesisimager/synthesisimager_cmpt.cc:22:
/data/install/include/casacore/scimath/Mathematics/FFTPack.h:42:2: warning: #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-Wcpp]
42 | #warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
| ^~~~~~~
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_4' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_5' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::setEndpoints Setting pixel end points [2, 5], [7, 5]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 5, 0] to [7, 5, 9] (00:00:12.000, +00.00.00.000, 1.415e+09Hz to 23:59:52.000, +00.00.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_6' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_0' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_1' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 3arcmin
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_2' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 3arcmin
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_3' of shape [6, 10]
2022-10-28 17:36:57 INFO PVGenerator::setWidth Rounding width up to next odd number of pixels (3), or 180000marcsec
2022-10-28 17:36:57 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:57 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:57 INFO ImageRegion::fromRecord+ [2, 4, 0] to [7, 6, 9] (00:00:12.000, -00.01.00.000, 1.415e+09Hz to 23:59:52.000, +00.01.00.000, 1.415e+09Hz)
2022-10-28 17:36:57 INFO SubImageFactory::createImage Creating image 'test_pv_1_4' of shape [6, 10]
2022-10-28 17:36:57 INFO name:: No table opened.
2022-10-28 17:36:57 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:57 INFO ImageFactory::createImage Created Temp image of shape [50, 50, 1000] with float valued pixels.
2022-10-28 17:36:58 INFO PVGenerator::generate Rotating image by -45 degrees about direction coordinate pixel (7.5, 7.5) to align specified slice with the x axis
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [0, 0, 0] to [49, 49, 999] (03:01:57.530, -35.32.49.013, 1.4145e+09Hz to 02:57:58.673, -34.43.38.701, 1.4155e+09Hz)
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Rotating DirectionCoordinate holding axes [0, 1]
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS No directional region specified. Using full positional plane.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using all spectral channels.
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created and initialized mask `mask0'
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created mask `mask0'
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [4, 7, 0] to [11, 7, 999] (03:01:31.077, -35.28.09.040, 1.4145e+09Hz to 03:01:06.781, -35.23.12.033, 1.4155e+09Hz)
2022-10-28 17:36:58 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:58 INFO name:: No table opened.
2022-10-28 17:36:58 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:58 INFO ImageFactory::createImage Created Paged image 'maskim' of shape [200, 200, 1, 1] with float valued pixels.
2022-10-28 17:36:58 INFO ImageFactory::createImage Created Paged image 'kk' of shape [200, 200, 1, 20] with float valued pixels.
2022-10-28 17:36:58 SEVERE image::pv (file /tmp/build-via-sdist-w36giith/casatools-6.5.3.9a13970.dev1/src/tools/image/image_cmpt.cc, line 4856) Exception Reported: The input image shape ([200, 200, 1, 20]) and mask shape ([200, 200, 1, 1]) are different, and it was specified that the mask should not be extended, so the mask cannot be applied to the (sub)image. Specifying that the mask should be extended may resolve the issue at File: /data/install/include/casacpp/imageanalysis/ImageAnalysis/SubImageFactory.tcc, line: 306
2022-10-28 17:36:58 INFO PVGenerator::generate Rotation angle (very nearly) 0 degrees, no rotation required
2022-10-28 17:36:58 INFO ImageRegion::fromRecord Selected bounding box :
2022-10-28 17:36:58 INFO ImageRegion::fromRecord+ [2, 2, 0, 0] to [20, 2, 0, 19] (00:06:32.213, -01.38.00.797, I, 1.41499e+09Hz to 00:05:20.159, -01.38.00.797, I, 1.41501e+09Hz)
2022-10-28 17:36:58 INFO ImageCollapser::_doDegenerateAxesCase All subimage axes to be collapsed are degenerate, using algorithm optimized for that case.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS No directional region specified. Using full positional plane.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using all spectral channels.
2022-10-28 17:36:58 INFO CasacRegionManager::fromBCS Using polarizations ALL
2022-10-28 17:36:58 INFO ImageMaskAttacher::makeMask Created mask `mask0'
2022-10-28 17:36:58 INFO name:: No table opened.
2022-10-28 17:36:58 INFO showcache:: The Table Cache is empty.
2022-10-28 17:36:59 WARN componentlist::close componentlist closed
2022-10-28 17:36:59 WARN componentlist::close componentlist closed
2022-10-28 17:36:59 INFO componentlist::summarize SUMMARY OF COMPONENT
2022-10-28 17:36:59 INFO componentlist::summarize+ Shape: Gaussian
2022-10-28 17:36:59 INFO componentlist::summarize+ Flux density: [(1,0), (0,0), (0,0), (0,0)] Jy +/- [(0,0), (0,0), (0,0), (0,0)]
2022-10-28 17:36:59 INFO componentlist::summarize+ Spectral model: Constant
2022-10-28 17:36:59 INFO componentlist::summarize+ Position: Position ---
2022-10-28 17:36:59 INFO componentlist::summarize+ --- long: 10:30:00.000 (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- lat: - 20.00.00.00 (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+
2022-10-28 17:36:59 INFO componentlist::summarize+ Size:
2022-10-28 17:36:59 INFO componentlist::summarize+ --- major axis FWHM: 4.00 arcsec (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- minor axis FWHM: 2.00 arcsec (fixed)
2022-10-28 17:36:59 INFO componentlist::summarize+ --- position angle: 30.0deg (fixed)
2022-10-28 17:36:59 SEVERE componentlist::summarize Exception Reported: List has only 1 components, but zero-based component 1 specified. Please specify a component less than 1
Traceback (most recent call last):
File "runtest.py", line 613, in run
shutil.copy2("{}{}.py".format(workdir + "tests/",test), workdir + "{}/".format(test if not test.endswith(".py") else test[:-3]))
File "/usr/local/lib/python3.8/shutil.py", line 435, in copy2
copyfile(src, dst, follow_symlinks=follow_symlinks)
File "/usr/local/lib/python3.8/shutil.py", line 264, in copyfile
with open(src, 'rb') as fsrc, open(dst, 'wb') as fdst:
FileNotFoundError: [Errno 2] No such file or directory: '/data/source/casa6/casatestutils/nosedir/tests/test_tool_image_fromcomplist.py'