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Job: Test Tools Macos 12 was successful

Build log

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08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,1)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (2,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 1 , 3C286_A Spw : 14 Scan : 31 : 31
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,1)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (2,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        FlagMSHandler::        Chunk = 32 [progress: 100%], Observation = 0, Array = 0, Scan = 31, Field = 1 (3C286_A), Spw = 15, Channels = 64, Corrs = [ RR RL LR LL ], Total Rows = 540
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 1 , 3C286_A Spw : 15 Scan : 31 : 31
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,1)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (0,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,2)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (1,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::processAntennaPair          Going to process requested baseline (2,3)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Manual::chunkSummary        => Data flagged so far 32.8125% (136080/414720)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        FlagMSHandler::nextChunk         ====================================================================================
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Manual::tableSummary        => Percentage of data flagged in table selection: 32.8125%
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        AgentFlagger::run        => Writing flags to the MS
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          observation 0 flagged: 1.44346e+06 total: 4.3991e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 15 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 13 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 12 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 11 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 14 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 2 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 9 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 6 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 7 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 1 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 5 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 10 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 8 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 4 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 3 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          spw 0 flagged: 90216 total: 274944 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          array 0 flagged: 1.44346e+06 total: 4.3991e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          antenna ea24 flagged: 721728 total: 2.19955e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          antenna ea19 flagged: 721728 total: 2.19955e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          antenna ea11 flagged: 721728 total: 2.19955e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          antenna ea01 flagged: 721728 total: 2.19955e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          field 3C286_A flagged: 1.44346e+06 total: 4.3991e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          scan 31 flagged: 725760 total: 2.21184e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          scan 30 flagged: 717696 total: 2.18726e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          correlation LL flagged: 360864 total: 1.09978e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          correlation RL flagged: 360864 total: 1.09978e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          correlation LR flagged: 360864 total: 1.09978e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          correlation RR flagged: 360864 total: 1.09978e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Summary::getResult          Total Flagged: 1.44346e+06 Total Counts: 4.3991e+06 (32.8%)
08-Mar-2023 00:39:15 2023-03-08 05:39:16        INFO        Display::displayReports         Report Displays are turned OFF
08-Mar-2023 00:39:15 test_tool_agentflagger.py::test_display::test_display_data_single_channel_selection
08-Mar-2023 00:39:15 AgentFlagger:: Check nominal behaviour for single spw:chan selection 
08-Mar-2023 00:39:15 The MS is already around, just unflag
08-Mar-2023 00:39:15 PASSED
08-Mar-2023 00:39:15
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::open        Table type is Measurement Set
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::initAgents        There are initially 1 agents in the list. Agents: unflag
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::initAgents        There are 1 valid agents in the list. Agents: unflag
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 1 [progress: 6%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 0, Channels = 4, Corrs = [ XX ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 2 [progress: 13%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 1, Channels = 512, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (1028/1028)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 3 [progress: 20%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 2, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (2/2)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 5 [progress: 33%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 4, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (1026/1026)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 6 [progress: 40%], Observation = 0, Array = 0, Scan = 2, Field = 0 (r aqr), Spw = 0, Channels = 4, Corrs = [ XX ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (4/4)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 8 [progress: 53%], Observation = 0, Array = 0, Scan = 2, Field = 0 (r aqr), Spw = 6, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (2050/2050)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 9 [progress: 60%], Observation = 0, Array = 0, Scan = 2, Field = 0 (r aqr), Spw = 7, Channels = 2048, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (4096/4096)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 11 [progress: 73%], Observation = 0, Array = 0, Scan = 3, Field = 0 (r aqr), Spw = 0, Channels = 4, Corrs = [ XX ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (6/6)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 12 [progress: 80%], Observation = 0, Array = 0, Scan = 3, Field = 0 (r aqr), Spw = 5, Channels = 1024, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (2048/2048)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 14 [progress: 93%], Observation = 0, Array = 0, Scan = 3, Field = 0 (r aqr), Spw = 7, Channels = 2048, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (4098/4098)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 15 [progress: 100%], Observation = 0, Array = 0, Scan = 3, Field = 0 (r aqr), Spw = 8, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::chunkSummary        => Data unflagged so far 100% (2/2)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::nextChunk         ====================================================================================
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Unflag::tableSummary        => Percentage of data un-flagged in table selection: 100%
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::run        => Writing flags to the MS
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::open        Table type is Measurement Set
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::selectData          Selected spw-channels ids are Axis Lengths: [4, 4]  (NB: Matrix in Row/Column order)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::selectData +        [1, 0, 511, 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::selectData +         2, 0, 0, 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::selectData +         3, 0, 511, 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::selectData +         4, 0, 0, 1]
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::initAgents        There are initially 3 agents in the list. Agents: manual, summary, display
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::setAgentParameters         autocorr is 0
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          data column is FLOAT_DATA
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          Visibility expression is REAL XX,YY
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          pause is 0
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          datadisplay is 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          reportdisplay is 0
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::setAgentParameters          format is screen
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::initAgents        There are 3 valid agents in the list. Agents: manual, summary, display
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagDataHandler::preLoadColumn         Setting row blocking to number of rows in selected table: 4
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 1 [progress: 25%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 1, Channels = 512, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 0 , r aqr Spw : 1 Scan : 1 : 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::processAntennaPair          Going to process requested baseline (0,0)
08-Mar-2023 00:39:17 /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6testenv/bin/python: No module named casaplotserver
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::chunkSummary        => Data flagged so far 100% (1024/1024)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 2 [progress: 50%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 2, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 0 , r aqr Spw : 2 Scan : 1 : 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::processAntennaPair          Going to process requested baseline (0,0)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::chunkSummary        => Data flagged so far 100% (2/2)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 3 [progress: 75%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 3, Channels = 512, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 0 , r aqr Spw : 3 Scan : 1 : 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::processAntennaPair          Going to process requested baseline (0,0)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::chunkSummary        => Data flagged so far 100% (1024/1024)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::        Chunk = 4 [progress: 100%], Observation = 0, Array = 0, Scan = 1, Field = 0 (r aqr), Spw = 4, Channels = 1, Corrs = [ XX YY ], Total Rows = 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::getChunkInfo         FlagAgentDisplay::getChunkInfo Field : 0 , r aqr Spw : 4 Scan : 1 : 1
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::processAntennaPair          Going to process requested baseline (0,0)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::chunkSummary        => Data flagged so far 100% (2/2)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        FlagMSHandler::nextChunk         ====================================================================================
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Manual::tableSummary        => Percentage of data flagged in table selection: 100%
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        AgentFlagger::run        => Writing flags to the MS
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          observation 0 flagged: 2052 total: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          spw 4 flagged: 2 total: 2 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          spw 3 flagged: 1024 total: 1024 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          spw 2 flagged: 2 total: 2 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          spw 1 flagged: 1024 total: 1024 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          array 0 flagged: 2052 total: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          antenna PM04 flagged: 2052 total: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          field r aqr flagged: 2052 total: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          scan 1 flagged: 2052 total: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          correlation YY flagged: 1026 total: 1026 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          correlation XX flagged: 1026 total: 1026 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Summary::getResult          Total Flagged: 2052 Total Counts: 2052 (100%)
08-Mar-2023 00:39:17 2023-03-08 05:39:17        INFO        Display::displayReports         Report Displays are turned OFF
08-Mar-2023 00:39:17 test_tool_agentflagger.py::test_display::test_display_float_data
08-Mar-2023 00:39:17 AgentFlagger: Select spw, display and flag single-dish MS
08-Mar-2023 00:39:17 Moving data...
08-Mar-2023 00:39:17 PASSED
08-Mar-2023 00:39:17
08-Mar-2023 00:39:17 - generated xml file: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_agentflagger/nose.xml -
08-Mar-2023 00:39:17 ======================== 35 passed, 1 warning in 51.98s ========================
08-Mar-2023 00:39:18 ============================= test session starts ==============================
08-Mar-2023 00:39:18 platform darwin -- Python 3.8.16, pytest-7.2.2, pluggy-1.0.0 -- /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6testenv/bin/python
08-Mar-2023 00:39:18 cachedir: .pytest_cache
08-Mar-2023 00:39:18 rootdir: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_componentlist, configfile: pytest.ini
08-Mar-2023 00:39:19 collecting ... collected 3 items
08-Mar-2023 00:39:19
08-Mar-2023 00:39:19
08-Mar-2023 00:39:19 test_tool_componentlist.py::componentlist_test::test_getfluxerror
08-Mar-2023 00:39:19 Test cl.getfluxerror()
08-Mar-2023 00:39:19 PASSED
08-Mar-2023 00:39:19
08-Mar-2023 00:39:19 2023-03-08 05:39:20        WARN        componentlist::close        componentlist closed
08-Mar-2023 00:39:19 2023-03-08 05:39:20        WARN        componentlist::close        componentlist closed
08-Mar-2023 00:39:19 test_tool_componentlist.py::componentlist_test::test_plp
08-Mar-2023 00:39:19 Test adding/updating plp spectral component
08-Mar-2023 00:39:19 PASSED
08-Mar-2023 00:39:19
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize        SUMMARY OF COMPONENT
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        Shape: Gaussian
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        Flux density: [(1,0), (0,0), (0,0), (0,0)] Jy +/- [(0,0), (0,0), (0,0), (0,0)]
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        Spectral model: Constant
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        Position: Position ---
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+               --- long:   10:30:00.000 (fixed)
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+               --- lat:  - 20.00.00.00 (fixed)
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+        Size:
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+               --- major axis FWHM:     4.00 arcsec (fixed)
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+               --- minor axis FWHM:     2.00 arcsec (fixed)
08-Mar-2023 00:39:19 2023-03-08 05:39:20        INFO        componentlist::summarize+               --- position angle: 30.0deg (fixed)
08-Mar-2023 00:39:19 2023-03-08 05:39:20        SEVERE        componentlist::summarize        Exception Reported: List has only 1 components, but zero-based component 1 specified. Please specify a component less than 1
08-Mar-2023 00:39:19 test_tool_componentlist.py::componentlist_test::test_summarize
08-Mar-2023 00:39:19 Test the cl.summarize() method
08-Mar-2023 00:39:19 PASSED
08-Mar-2023 00:39:19
08-Mar-2023 00:39:19 - generated xml file: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_componentlist/nose.xml -
08-Mar-2023 00:39:19 ========================= 3 passed, 1 warning in 1.35s =========================
08-Mar-2023 00:39:19 ============================= test session starts ==============================
08-Mar-2023 00:39:19 platform darwin -- Python 3.8.16, pytest-7.2.2, pluggy-1.0.0 -- /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6testenv/bin/python
08-Mar-2023 00:39:19 cachedir: .pytest_cache
08-Mar-2023 00:39:19 rootdir: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_quanta, configfile: pytest.ini
08-Mar-2023 00:39:21 collecting ... collected 9 items
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Exception Reported: Error in QuantumHolder::fromString with input string "bogus": Illegal input units or format
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE        +         in converting quantity
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_convert_test::test_exceptions
08-Mar-2023 00:39:21 Test various exception cases
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_convert_test::test_valid
08-Mar-2023 00:39:21 Test specifying the quantity as a scalar
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_convert_test::test_value_as_string
08-Mar-2023 00:39:21 Test specifying value as a string
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Error in QuantumHolder::fromString with input string "blah": Illegal input units or format
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE        +         in converting quantity
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Exception Reported: Error in QuantumHolder::fromString with input string "blah": Illegal input units or format
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE        +         in converting quantity
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Error in QuantumHolder::fromString with input string "blah": Illegal input units or format
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE        +         in converting quantity
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Exception Reported: Error in QuantumHolder::fromString with input string "blah": Illegal input units or format
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE        +         in converting quantity
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Exception Reported: Unit::check Illegal unit string 'zz'
08-Mar-2023 00:39:21 2023-03-08 05:39:21        SEVERE                Exception Reported: Unit::check Illegal unit string 'zz'
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_exceptions
08-Mar-2023 00:39:21 Test various exception cases
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_multidimensional_arra_value
08-Mar-2023 00:39:21 Test specifying the quantity as a multidimensional array
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_scalar_value
08-Mar-2023 00:39:21 Test specifying the quantity as a scalar
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_value_as_record
08-Mar-2023 00:39:21 Test value as record (eg already a quantity).
08-Mar-2023 00:39:21 This is essentially a reflection operator.
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_value_as_string
08-Mar-2023 00:39:21 Test specifying value as a string
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 test_tool_quanta.py::quanta_quantity_test::test_vector_value
08-Mar-2023 00:39:21 Test specifying the quantity as a vector
08-Mar-2023 00:39:21 PASSED
08-Mar-2023 00:39:21
08-Mar-2023 00:39:21 - generated xml file: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_quanta/nose.xml -
08-Mar-2023 00:39:21 ========================= 9 passed, 1 warning in 1.52s =========================
08-Mar-2023 00:39:21 ============================= test session starts ==============================
08-Mar-2023 00:39:21 platform darwin -- Python 3.8.16, pytest-7.2.2, pluggy-1.0.0 -- /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6testenv/bin/python
08-Mar-2023 00:39:21 cachedir: .pytest_cache
08-Mar-2023 00:39:21 rootdir: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_regionmanager, configfile: pytest.ini
08-Mar-2023 00:39:23 collecting ... collected 34 items
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        ImageFactory::createImage        Created Temp image  of shape [500, 500] with float valued pixels.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse         line# 2: difference found
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Region read from text string ellipse [[0:0:0, 0.0.0], [10arcmin, 5arcmin], 45deg]
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS+        - ellipse [[0:0:0, 0.0.0], [7arcmin, 2arcmin], 45deg]
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse         line# 2: difference found
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Region read from text string ellipse [[0:0:0, 0.0.0], [10arcmin, 5arcmin], 45deg]
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS+        -ellipse [[0:0:0, 0.0.0], [7arcmin, 2arcmin], 45deg]
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_complement_is_last_line
08-Mar-2023 00:39:23 Test CAS-12978 fix, difference line is last in file works
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using channel range(s)
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations ALL
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_contiguous_channels
08-Mar-2023 00:39:23 Test setting multiple continuous channels
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using all spectral channels.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations QU
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_continguous_stokes
08-Mar-2023 00:39:23 Test setting a contiguous stokes
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 2.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 4735100000.0, 2.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using all spectral channels.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations I
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_first_stokes
08-Mar-2023 00:39:23 Test setting first stokes
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using all spectral channels.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations ALL
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_full_image
08-Mar-2023 00:39:23 Test default gives region of entire image
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479133877693258, 0.7825776650571085, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24791339, 0.782577665, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using specified box(es) 1,2,3,4,5,6,7,8,9,10,11,12
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_multiple_boxes
08-Mar-2023 00:39:23 Test setting multiple boxes
08-Mar-2023 00:39:23 got [1.2479338718038553, 0.7825645538110931, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24793387, 0.782564554, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479297756405987, 0.7825674669653366, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24792978, 0.782567467, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using specified box(es) 1,2,3,4,5,6,7,8
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_multiple_boxes_channel_ranges_stokes_ranges
08-Mar-2023 00:39:23 Test multiple channel ranges, multiple stokes ranges, and multiple boxes
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 10735100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 10735100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 4735100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 4735100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 12335100000.0, 2.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 12335100000.0, 2.0]
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 6335100000.0, 2.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 6335100000.0, 2.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 10735100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 10735100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 4735100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 4735100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 12335100000.0, 2.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 12335100000.0, 2.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 6335100000.0, 2.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 6335100000.0, 2.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        passing empty or nonexistant spectral Coordinate axis
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using specified box(es) 1,2,3,4,5,6,7,8
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_multiple_boxes_image_with_direction_coordinate_only
08-Mar-2023 00:39:23 Test multiple boxes on image with direction coordinate only
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        passing empty or nonexistant spectral Coordinate axis
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using specified box(es) 1,2,3,4,5,6,7,8
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_multiple_boxes_multiple_stokes_no_spectral_axis
08-Mar-2023 00:39:23 Test multiple stokes ranges, and multiple boxes on image with no spectral axis
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 4.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 4.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 4.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 4.0]
08-Mar-2023 00:39:23 got [1.2479420640592822, 0.7825587274773647, 1.0]
08-Mar-2023 00:39:23 exp [1.24794206, 0.782558727, 1.0]
08-Mar-2023 00:39:23 got [1.2479379679434162, 0.782561640648436, 2.0]
08-Mar-2023 00:39:23 exp [1.24793797, 0.782561641, 2.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 4.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 4.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 4.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 4.0]
08-Mar-2023 00:39:23 got [1.2479502562199296, 0.7825529011099799, 1.0]
08-Mar-2023 00:39:23 exp [1.24795026, 0.782552901, 1.0]
08-Mar-2023 00:39:23 got [1.2479461601514532, 0.7825558142978793, 2.0]
08-Mar-2023 00:39:23 exp [1.24794616, 0.782555814, 2.0]
08-Mar-2023 00:39:23 PASSED
08-Mar-2023 00:39:23
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using channel range(s)
08-Mar-2023 00:39:23 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations ALL
08-Mar-2023 00:39:23 test_tool_regionmanager.py::rg_frombcs_test::test_multiple_channel_ranges
08-Mar-2023 00:39:23 Test multiple channel ranges
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 4735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479133877693258, 0.7825776650571085, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24791339, 0.782577665, 6335100000.0, 4.0]
08-Mar-2023 00:39:23 got [1.2479523012078841, 0.7825499900718148, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 exp [1.2479523, 0.78254999, 10735100000.0, 1.0]
08-Mar-2023 00:39:23 got [1.2479133877693258, 0.7825776650571085, 12335100000.0, 4.0]
08-Mar-2023 00:39:23 exp [1.24791339, 0.782577665, 12335100000.0, 4.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_region_record
08-Mar-2023 00:39:24 Test setting region record
08-Mar-2023 00:39:24 got [1.24795026e+00 7.82552901e-01 4.73510000e+09 1.00000000e+00]
08-Mar-2023 00:39:24 exp [1.24795026, 0.782552901, 4735100000.0, 1.0]
08-Mar-2023 00:39:24 got [1.24794616e+00 7.82555814e-01 1.23351000e+10 4.00000000e+00]
08-Mar-2023 00:39:24 exp [1.24794616, 0.782555814, 12335100000.0, 4.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        Combined 3 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Region read from text string box[[1pix,2pix],[3pix,4pix]]
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS+        box[[5pix,6pix],[7pix,8pix]]
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS+        box[[9pix,10pix],[11pix,12pix]]
08-Mar-2023 00:39:24 2023-03-08 05:39:24        WARN        CasacRegionManager::fromBCS        Stokes cannot be determined because this region type is not handled yet. But chances are very good this is no need to be alarmed.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        ImageRegion::fromRecord        Selected bounding box :
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        ImageRegion::fromRecord+            [1, 2, 0, 0] to [11, 12, 19, 3]  (04:46:00.548, +44.50.13.123, 4.7351e+09Hz, I to 04:46:00.266, +44.50.16.127, 1.23351e+10Hz, V)
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        ImageRegion::fromRecord        Creating image 'xxyy.im' of shape [11, 11, 20, 4]
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_region_text_string
08-Mar-2023 00:39:24 Test setting a region text string
08-Mar-2023 00:39:24 got [1.24795026 0.7825529 ]
08-Mar-2023 00:39:24 exp [1.24795026, 0.782552901]
08-Mar-2023 00:39:24 got [1.24792978 0.78256747]
08-Mar-2023 00:39:24 exp [1.2479297756405987, 0.7825674669653366]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using all spectral channels.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations IUV
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_set_multiple_stokes_ranges
08-Mar-2023 00:39:24 Test setting multiple stokes ranges
08-Mar-2023 00:39:24 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 1.0]
08-Mar-2023 00:39:24 exp [1.2479523, 0.78254999, 4735100000.0, 1.0]
08-Mar-2023 00:39:24 got [1.2479133877693258, 0.7825776650571085, 12335100000.0, 1.0]
08-Mar-2023 00:39:24 exp [1.24791339, 0.782577665, 12335100000.0, 1.0]
08-Mar-2023 00:39:24 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 3.0]
08-Mar-2023 00:39:24 exp [1.2479523, 0.78254999, 4735100000.0, 3.0]
08-Mar-2023 00:39:24 got [1.2479133877693258, 0.7825776650571085, 12335100000.0, 4.0]
08-Mar-2023 00:39:24 exp [1.24791339, 0.782577665, 12335100000.0, 4.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using specified box(es) 1,2,3,4
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_single_box
08-Mar-2023 00:39:24 Test setting single box
08-Mar-2023 00:39:24 got [1.2479502562199296, 0.7825529011099799, 4735100000.0, 1.0]
08-Mar-2023 00:39:24 exp [1.24795026, 0.782552901, 4735100000.0, 1.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using channel range(s)
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations ALL
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_single_channel
08-Mar-2023 00:39:24 Test setting a single channel
08-Mar-2023 00:39:24 got [1.2479523012078841, 0.7825499900718148, 6335100000.0, 1.0]
08-Mar-2023 00:39:24 exp [1.2479523, 0.78254999, 6335100000.0, 1.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using all spectral channels.
08-Mar-2023 00:39:24 2023-03-08 05:39:24        INFO        CasacRegionManager::fromBCS        Using polarizations Q
08-Mar-2023 00:39:24 test_tool_regionmanager.py::rg_frombcs_test::test_single_stokes
08-Mar-2023 00:39:24 Test setting a single stokes
08-Mar-2023 00:39:24 got [1.2479523012078841, 0.7825499900718148, 4735100000.0, 2.0]
08-Mar-2023 00:39:24 exp [1.2479523, 0.78254999, 4735100000.0, 2.0]
08-Mar-2023 00:39:24 PASSED
08-Mar-2023 00:39:24
08-Mar-2023 00:39:24 2023-03-08 05:39:25        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:29 2023-03-08 05:39:29        INFO        AsciiRegionFileParser::_parse        Combined 1089 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:29 2023-03-08 05:39:29        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_1000
08-Mar-2023 00:39:37 Test a large number of regions, CAS-7405
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [250, 250] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_3258
08-Mar-2023 00:39:37 Verify fix to CAS-3258
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [250, 250] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_3259
08-Mar-2023 00:39:37 Verify fix to CAS-3259
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [250, 250] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 2 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_3260
08-Mar-2023 00:39:37 Verify fix to CAS-3260
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [50, 50, 10] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_4415
08-Mar-2023 00:39:37 Verify CAS-4415 (parser did not properly handle frquency decreasing with pixel number)
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [100, 100, 80] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        SEVERE        regionmanager::fromtext        Exception Reported:  line# 1: AnnotationBase: setFrequencyLimits: Neither frequency specified has units. Both must at File: /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CMAKECI0-OSX12/casa6/casatools/src/code/imageanalysis/IO/RegionTextParser.cc, line: 969
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_4425
08-Mar-2023 00:39:37 Verify CAS-4425 (pixel units now accounted for in range and no units throws exception)
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Temp image  of shape [20, 20, 200] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse         line# 1: global found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        SEVERE        regionmanager::fromtext        Exception Reported:  line# 2: Exception: Unknown direction reference frame 'B1950 frame=LSRK veltype=RADIO restfreq=1.42040575e+09Hz'.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        SEVERE        regionmanager::fromtext+        ... thrown by casa::AnnotationBase::AnnotationBase(const casa::AnnotationBase::Type, const casacore::String &, const casacore::CoordinateSystem &, const casacore::Quantity &, const casacore::Quantity &, const casacore::String &, const casacore::String &, const casacore::Quantity &, const Vector<Stokes::StokesTypes> &) at File: /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CMAKECI0-OSX12/casa6/casatools/src/code/imageanalysis/Annotations/AnnotationBase.cc, line: 115 at File: /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CMAKECI0-OSX12/casa6/casatools/src/code/imageanalysis/IO/RegionTextParser.cc, line: 969
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse         line# 1: global found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse         line# 1: global found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_CAS_8072
08-Mar-2023 00:39:37 Verify rest frequency precision issue has been fixed
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageFactory::createImage        Created Paged image 'icrs.im' of shape [100, 100] with float valued pixels.
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_ICRS
08-Mar-2023 00:39:37 CAS-13074, verify that coord=ICRS works correctly
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 1. Create a 100x100 image using the default coordinate system provided by ia.shape()
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2. Modify the coordinate system of the image from J2000 to GALACTIC ref frame,
08-Mar-2023 00:39:37    since the difference between J2000 and ICRS seems to be only about 10 marcsec,
08-Mar-2023 00:39:37    so we need to use a coordinate system where the values in the two systems differ
08-Mar-2023 00:39:37    more to get a convincing test.
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 3. Set all pixels to 0, except the reference pixel 50, 50 which is set to 1.
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 4. Create a CRTF region string using coords='ICRS' and a box that is centered at
08-Mar-2023 00:39:37    GALACTIC long=0, lat=0 (the ref direction in the image) but using ICRS coords
08-Mar-2023 00:39:37    of course. The hardcoded ICRS coords were determined using me.measure() to
08-Mar-2023 00:39:37    convert from GALACTIC to ICRS.
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 5. Run ia.statistics() using region=the CRTF text string previously created.
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 6. Test that the max pixel value found in the region is 1. This indicates that
08-Mar-2023 00:39:37    the region was applied correctly.
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        mynewregion.crtf line# 3: difference found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        mynewregion.crtf line# 5: difference found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        mynewregion.crtf line# 6: difference found
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 5 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageRegion::fromRecord        Selected bounding box :
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageRegion::fromRecord+            [245, 132, 0, 0] to [410, 298, 0, 0]  (15:20:40.458, -57.10.16.258, 8.56444e+10Hz, I to 15:20:38.024, -57.09.56.337, 8.56444e+10Hz, I)
08-Mar-2023 00:39:37 2023-03-08 05:39:38        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
08-Mar-2023 00:39:37 test_tool_regionmanager.py::rg_fromtextfile_test::test_crtf_has_multiple_diff_and_ends_with_diff_bug_fix
08-Mar-2023 00:39:37 CAS-12980, verify fix that allows supplied CRTF file to work correctly
08-Mar-2023 00:39:37 1. copy necessary data
08-Mar-2023 00:39:37 2. run ia.subimage() on image using region file
08-Mar-2023 00:39:37 3. confirm that the correct number of pixels are not masked
08-Mar-2023 00:39:37 PASSED
08-Mar-2023 00:39:37
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        /Volumes/DATA2/data/casatestdata/unittest/rgtool/testEllipse90deg.crtf line# 2: global found
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        ImageRegion::fromRecord        Selected bounding box :
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        ImageRegion::fromRecord+            [86, 260, 0, 0] to [332, 505, 0, 0]  (286.980670deg, 42.444398deg, I, 3.43915e+11Hz to 286.968632deg, 42.453245deg, I, 3.43915e+11Hz)
08-Mar-2023 00:39:38 2023-03-08 05:39:38        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
08-Mar-2023 00:39:38 2023-03-08 05:39:38        WARN        image::open (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 4208)        Another image is already open, closing first
08-Mar-2023 00:39:38 test_tool_regionmanager.py::rg_fromtextfile_test::test_ellipse
08-Mar-2023 00:39:38 Test ellipse for image in GALACTIC and file in J2000
08-Mar-2023 00:39:38 PASSED
08-Mar-2023 00:39:38
08-Mar-2023 00:39:38 test_tool_regionmanager.py::rg_fromtextfile_test::test_exceptions
08-Mar-2023 00:39:38 test exception cases
08-Mar-2023 00:39:38 PASSED
08-Mar-2023 00:39:38
08-Mar-2023 00:39:38 2023-03-08 05:39:39        INFO        ImageFactory::createImage        Created Temp image  of shape [500, 500] with float valued pixels.
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:39 test_tool_regionmanager.py::rg_fromtextfile_test::test_poly_2000
08-Mar-2023 00:39:39 Test polygon with 2000 points specified in pixels (CAS-13727)
08-Mar-2023 00:39:39 PASSED
08-Mar-2023 00:39:39
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        FITSCoordinateUtil::fromFITSHeader        Neither SPECSYS nor VELREF keyword given, spectral reference frame not defined ...
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        RegionTextParser::_determineVersion        RegionTextParser::_determineVersion: Found spec version 0
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:39 test_tool_regionmanager.py::rg_fromtextfile_test::test_read
08-Mar-2023 00:39:39 Read test
08-Mar-2023 00:39:39 PASSED
08-Mar-2023 00:39:39
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        ImageFactory::createImage        Created Temp image  of shape [200, 200] with float valued pixels.
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        ImageRegion::fromRecord        Selected bounding box :
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        ImageRegion::fromRecord+            [50, 31] to [150, 171]  (00:03:20.047, -01.09.00.278 to 23:56:39.950, +01.11.00.303)
08-Mar-2023 00:39:39 2023-03-08 05:39:39        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
08-Mar-2023 00:39:39 2023-03-08 05:39:39        WARN        image::open (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 4208)        Another image is already open, closing first
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        ImageFactory::createImage        Created Temp image  of shape [200, 200] with float valued pixels.
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        ImageRegion::fromRecord        Selected bounding box :
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        ImageRegion::fromRecord+            [50, 31] to [149, 171]  (00:03:20.047, -01.09.00.278 to 23:56:43.952, +01.11.00.303)
08-Mar-2023 00:39:39 2023-03-08 05:39:40        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
08-Mar-2023 00:39:39 2023-03-08 05:39:40        WARN        image::open (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 4208)        Another image is already open, closing first
08-Mar-2023 00:39:40 test_tool_regionmanager.py::rg_fromtextfile_test::test_rectangle_rotation
08-Mar-2023 00:39:40 Test rectangle region is preserved under coordinate frame switch
08-Mar-2023 00:39:40 PASSED
08-Mar-2023 00:39:40
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        ImageFactory::createImage        Created Temp image  of shape [200, 200] with float valued pixels.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 test_tool_regionmanager.py::rg_fromtextfile_test::test_rotbox
08-Mar-2023 00:39:40 Test rotbox when specified in pixels (CAS-5723)
08-Mar-2023 00:39:40 PASSED
08-Mar-2023 00:39:40
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        ImageFactory::createImage        Created Temp image  of shape [4, 4, 20] with float valued pixels.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        WARN        AsciiRegionFileParser::_parse         line# 1: Error converting world region to lattice region which probably indicates the region lies outside of the image. This region will be ignored.The related message is: LCBox::LCBox - blc [0] must be <= trc [-99889]
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 0 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        SEVERE        regionmanager::selectedchannels        Exception Reported: Exception: The specified spectral range range=[1315MHz, 1315.1MHz] does not intersect the image spectral range..
08-Mar-2023 00:39:40 2023-03-08 05:39:40        SEVERE        regionmanager::selectedchannels+        ... thrown by vector<casacore::uInt> casa::CasacRegionManager::_spectralRangeFromRangeFormat(casacore::uInt &, const casacore::String &, const casacore::IPosition &) const at File: /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CMAKECI0-OSX12/casa6/casatools/src/code/imageanalysis/Regions/CasacRegionManager.cc, line: 1017
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 test_tool_regionmanager.py::rg_selectedchannels_test::test_no_overlap
08-Mar-2023 00:39:40 Test selection outside of image
08-Mar-2023 00:39:40 PASSED
08-Mar-2023 00:39:40
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        ImageFactory::createImage        Created Temp image  of shape [4, 4, 4] with float valued pixels.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        SEVERE        regionmanager::selectedchannels        Exception Reported: Exception: Associated coordinate system has no spectral axis.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        SEVERE        regionmanager::selectedchannels+        ... thrown by vector<long> casac::regionmanager::selectedchannels(const std::string &, const vector<long> &) at File: /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/regionmanager/regionmanager_cmpt.cc, line: 688
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 test_tool_regionmanager.py::rg_selectedchannels_test::test_no_spectral_axis
08-Mar-2023 00:39:40 Test no spectral axis throws exception
08-Mar-2023 00:39:40 PASSED
08-Mar-2023 00:39:40
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        ImageFactory::createImage        Created Temp image  of shape [4, 4, 20] with float valued pixels.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        Combined 1 image regions (which excludes any annotation regions)
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        AsciiRegionFileParser::_parse        The specified region will select all pixels that are included in the region. Full pixels will be included even when they are only partially covered by the region(s).
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 2023-03-08 05:39:40        INFO        name::        No table opened.
08-Mar-2023 00:39:40 test_tool_regionmanager.py::rg_selectedchannels_test::test_range
08-Mar-2023 00:39:40 Test range
08-Mar-2023 00:39:40 PASSED
08-Mar-2023 00:39:40
08-Mar-2023 00:39:40 - generated xml file: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_regionmanager/nose.xml -
08-Mar-2023 00:39:40 ======================== 34 passed, 1 warning in 18.17s ========================
08-Mar-2023 00:39:40 ============================= test session starts ==============================
08-Mar-2023 00:39:40 platform darwin -- Python 3.8.16, pytest-7.2.2, pluggy-1.0.0 -- /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6testenv/bin/python
08-Mar-2023 00:39:40 cachedir: .pytest_cache
08-Mar-2023 00:39:40 rootdir: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_transpose, configfile: pytest.ini
08-Mar-2023 00:39:42 collecting ... collected 6 items
08-Mar-2023 00:39:42
08-Mar-2023 00:39:42
08-Mar-2023 00:39:43 2023-03-08 05:39:43        INFO        SubImageFactory::createImage        Creating image 'blahxx.im' of shape [1536, 1536, 1, 2]
08-Mar-2023 00:39:44 2023-03-08 05:39:44        INFO        name::        No table opened.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        INFO        name::        No table opened.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:44 test_tool_image_transpose.py::ia_transpose_test::test_cas_2364
08-Mar-2023 00:39:44 test CAS-2364 fix
08-Mar-2023 00:39:44 PASSED
08-Mar-2023 00:39:44
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        image::open (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 4208)        Exception Reported: Exception: File name is empty.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        image::open (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 4208)+        ... thrown by static void casa::ImageFactory::_checkInfile(const casacore::String &) at File: /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CMAKECI0-OSX12/casa6/casatools/src/code/imageanalysis/ImageAnalysis/ImageFactory2.cc, line: 373
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 2 were given for reordering. Number of axes to reorder must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:44        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 2 were given for reordering. Number of axes to reorder must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        ImageTransposer::_getOrder        Axis number 0 specified multiple times in order parameter 10 . It can only be specified once.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:44        SEVERE        ImageTransposer::_getOrder        Axis number 0 specified multiple times in order parameter 10 . It can only be specified once.
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Image has 3 axes but 2 were given. Number of given axes must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:44        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:44        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Image has 3 axes but 2 were given. Number of given axes must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 5 were given for reordering. Number of axes to reorder must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 5 were given for reordering. Number of axes to reorder must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Image has 3 axes but 4 were given. Number of given axes must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Image has 3 axes but 4 were given. Number of given axes must match the number of image axes
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        No axis matches requested axis s. Image axis names are [right ascension, declination, frequency]
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        No axis matches requested axis s. Image axis names are [right ascension, declination, frequency]
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Ambiguous axis specification. Both r and r match image axis name right ascension
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        CoordinateSystem::getWorldAxesOrder (file ../../coordinates/Coordinates/CoordinateSystem.cc, line 4665)        Ambiguous axis specification. Both r and r match image axis name right ascension
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 103 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:44 2023-03-08 05:39:45        SEVERE        image::transpose (file /private/var/folders/q5/jwdh98d515sfrgtg33cs5p_80000gq/T/build-via-sdist-8w2u48nk/casatools-6.5.5.9a13857.dev29+dirty/src/tools/image/image_cmpt.cc, line 6455)        Exception Reported: 2023-03-08 05:39:45        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 103 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        name::        No table opened.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:45 test_tool_image_transpose.py::ia_transpose_test::test_exceptions
08-Mar-2023 00:39:45 imtrans: Test various exception cases
08-Mar-2023 00:39:45 PASSED
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ImageFactory::createImage        Created Temp image  of shape [10, 10, 4, 10] with float valued pixels.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ::::ImageFactory::createImage        Created Temp image  of shape [10, 10, 4, 10] with float valued pixels.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ::::image::fromshape        Ran ia.fromshape
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ::::image::fromshape        ia.fromshape(outfile="", shape=[10,10,4,10], csys={...}, linear=false, overwrite=false, log=true, type="f")
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ::::image::transpose        Ran ia.transpose
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ::::image::transpose        ia.transpose(outfile="", order="3210")
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        name::        No table opened.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:45 test_tool_image_transpose.py::ia_transpose_test::test_history
08-Mar-2023 00:39:45 Test history records are written
08-Mar-2023 00:39:45 PASSED
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ImageFactory::createImage        Created Temp image  of shape [10, 20, 30] with float valued pixels.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        BeamManipulator::set        Setting (global) restoring beam.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        BeamManipulator::set        Beam parameters:  Major          : 4 arcmin
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        BeamManipulator::set+          Minor          : 3 arcmin
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        BeamManipulator::set+          Position Angle : 0 deg
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        name::        No table opened.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:45 test_tool_image_transpose.py::ia_transpose_test::test_imageinfo
08-Mar-2023 00:39:45 Verify image info is copied
08-Mar-2023 00:39:45 PASSED
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'straight_copy_0' of shape [5, 6, 7]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'straight_copy_1' of shape [5, 6, 7]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'straight_copy_2' of shape [5, 6, 7]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ImageTransposer::transpose        Old to new axis mapping is [0, 1, 2]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'straight_copy_3' of shape [5, 6, 7]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        ImageTransposer::transpose        Old to new axis mapping is [0, 1, 2]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        name::        No table opened.
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:45 test_tool_image_transpose.py::ia_transpose_test::test_straight_copy
08-Mar-2023 00:39:45 No actual transposing
08-Mar-2023 00:39:45 PASSED
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'transpose_0' of shape [6, 7, 5]
08-Mar-2023 00:39:45 2023-03-08 05:39:45        INFO        SubImageFactory::createImage        Creating image 'transpose_1' of shape [6, 7, 5]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        SubImageFactory::createImage        Creating image 'transpose_2' of shape [6, 7, 5]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        SubImageFactory::createImage        Creating image 'transpose_3' of shape [6, 7, 5]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        name::        No table opened.
08-Mar-2023 00:39:45 2023-03-08 05:39:46        INFO        showcache::        The Table Cache is empty.
08-Mar-2023 00:39:45 test_tool_image_transpose.py::ia_transpose_test::test_transpose
08-Mar-2023 00:39:45 Test transposing
08-Mar-2023 00:39:45 PASSED
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 - generated xml file: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_image_transpose/nose.xml -
08-Mar-2023 00:39:45 ========================= 6 passed, 1 warning in 4.76s =========================
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_calanalysis
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_calanalysis/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_calanalysis/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_ms/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_ms /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_ms/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_ms
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_ms/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_ms/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_pbcor/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_image_pbcor /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_pbcor/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_pbcor
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_image_pbcor/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_pbcor/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_msmetadata/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_msmetadata /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_msmetadata/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_msmetadata
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_msmetadata/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_msmetadata/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_image /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_image/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_vpmanager/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_vpmanager /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_vpmanager/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_vpmanager
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_vpmanager/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_vpmanager/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_coordsys/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_coordsys /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_coordsys/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_coordsys
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_coordsys/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_coordsys/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_imagepol/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_imagepol /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_imagepol/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_imagepol
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_imagepol/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_imagepol/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_simulator/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_simulator /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_simulator/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_simulator
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_simulator/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_simulator/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_table/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_table /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_table/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_table
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_table/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_table/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_measures/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_measures /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_measures/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_measures
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_measures/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_measures/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_agentflagger/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_agentflagger /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_agentflagger/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_agentflagger
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_agentflagger/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_agentflagger/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_componentlist/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_componentlist /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_componentlist/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_componentlist
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_componentlist/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_componentlist/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_quanta/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_quanta /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_quanta/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_quanta
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_quanta/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_quanta/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_regionmanager/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_regionmanager /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_regionmanager/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_regionmanager
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_regionmanager/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_regionmanager/']
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Setting Working Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_transpose/
08-Mar-2023 00:39:45 Copying: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/tests/ to test_tool_image_transpose /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_transpose/
08-Mar-2023 00:39:45 Test Directory: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_transpose
08-Mar-2023 00:39:45
08-Mar-2023 00:39:45 Running Command: pytest ['--junitxml=/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/xml/test_tool_image_transpose/nose.xml', '-s', '--disable-pytest-warnings', '--verbose', '-ra', '--tb=short', '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/casa6/casatestutils/nosedir/test_tool_image_transpose/']
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08-Mar-2023 00:39:46 Finished task 'Test wheel' with result: Success
08-Mar-2023 00:39:46 Starting task 'Parse tests' of type 'com.atlassian.bamboo.plugins.testresultparser:task.testresultparser.junit'
08-Mar-2023 00:39:46 Parsing test results under /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12...
08-Mar-2023 00:39:48 Finished task 'Parse tests' with result: Success
08-Mar-2023 00:39:48 Starting task 'Script' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
08-Mar-2023 00:39:48
Beginning to execute external process for build 'CASA - CMake CI Build - CAS-13857 - Test Tools Macos 12 #181 (CASA-CMAKECI0-CTTM12-181)'
... running command line:
/Users/casaci/bamboohome/temp/CASA-CMAKECI0-CTTM12-181-ScriptBuildTask-1597799603828483028.sh
... in: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12
08-Mar-2023 00:39:48 Cloning into 'casa-build-utils'...
08-Mar-2023 00:39:48 /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12
08-Mar-2023 00:39:56 Looking in indexes: https://casa-pip.nrao.edu/repository/pypi-group/simple, https://pypi.org/simple
08-Mar-2023 00:39:57 Collecting twine
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08-Mar-2023 00:39:58 Collecting importlib-resources
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08-Mar-2023 00:39:58 Collecting docutils>=0.13.1
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08-Mar-2023 00:39:58 Collecting bleach>=2.1.0
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08-Mar-2023 00:39:58 Collecting Pygments>=2.5.1
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08-Mar-2023 00:39:58 Collecting certifi>=2017.4.17
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08-Mar-2023 00:39:59 Installing collected packages: webencodings, zipp, urllib3, typing-extensions, six, rfc3986, Pygments, pkginfo, more-itertools, mdurl, idna, docutils, charset-normalizer, certifi, requests, markdown-it-py, jaraco.classes, importlib-resources, importlib-metadata, bleach, rich, requests-toolbelt, readme-renderer, keyring, twine
08-Mar-2023 00:40:03 Successfully installed Pygments-2.14.0 bleach-6.0.0 certifi-2022.12.7 charset-normalizer-3.1.0 docutils-0.19 idna-3.4 importlib-metadata-6.0.0 importlib-resources-5.12.0 jaraco.classes-3.2.3 keyring-23.13.1 markdown-it-py-2.2.0 mdurl-0.1.2 more-itertools-9.1.0 pkginfo-1.9.6 readme-renderer-37.3 requests-2.28.2 requests-toolbelt-0.10.1 rfc3986-2.0.0 rich-13.3.2 six-1.16.0 twine-4.0.2 typing-extensions-4.5.0 urllib3-1.26.14 webencodings-0.5.1 zipp-3.15.0
08-Mar-2023 00:40:03 WARNING: You are using pip version 22.0.4; however, version 23.0.1 is available.
08-Mar-2023 00:40:03 You should consider upgrading via the '/Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12/wheeldirectory/casa6testenv/bin/python3 -m pip install --upgrade pip' command.
08-Mar-2023 00:40:03 usage: twine upload [-h] [-r REPOSITORY] [--repository-url REPOSITORY_URL]
08-Mar-2023 00:40:03                     [-s] [--sign-with SIGN_WITH] [-i IDENTITY] [-u USERNAME]
08-Mar-2023 00:40:03                     [-p PASSWORD] [--non-interactive] [-c COMMENT]
08-Mar-2023 00:40:03                     [--config-file CONFIG_FILE] [--skip-existing]
08-Mar-2023 00:40:03                     [--cert path] [--client-cert path] [--verbose]
08-Mar-2023 00:40:03                     [--disable-progress-bar]
08-Mar-2023 00:40:03                     dist [dist ...]
08-Mar-2023 00:40:03 twine upload: error: the following arguments are required: dist
08-Mar-2023 00:40:03 /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12
08-Mar-2023 00:40:03 Finished task 'Script' with result: Success
08-Mar-2023 00:40:03 Starting task 'Reset config.py' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script'
08-Mar-2023 00:40:03
Beginning to execute external process for build 'CASA - CMake CI Build - CAS-13857 - Test Tools Macos 12 #181 (CASA-CMAKECI0-CTTM12-181)'
... running command line:
/Users/casaci/bamboohome/temp/CASA-CMAKECI0-CTTM12-181-ScriptBuildTask-3382312775819941584.sh
... in: /Volumes/DATA2/bamboohome/xml-data/build-dir/CASA-CMAKECI0-CTTM12
08-Mar-2023 00:40:03   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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08-Mar-2023 00:40:04 Finished task 'Reset config.py' with result: Success
08-Mar-2023 00:40:04 Running post build plugin 'Docker Container Cleanup'
08-Mar-2023 00:40:04 Running post build plugin 'NCover Results Collector'
08-Mar-2023 00:40:04 Running post build plugin 'Clover Results Collector'
08-Mar-2023 00:40:04 Running post build plugin 'npm Cache Cleanup'
08-Mar-2023 00:40:04 Running post build plugin 'Artifact Copier'
08-Mar-2023 00:40:04 Publishing an artifact: OSX12 casatools wheel
08-Mar-2023 00:40:09 Finished publishing of artifact Required job artifact: [OSX12 casatools wheel], pattern: [casatools*.whl] anchored at: [wheeldirectory/] in 5.681 s
08-Mar-2023 00:40:09 Finalising the build...
08-Mar-2023 00:40:09 Stopping timer.
08-Mar-2023 00:40:09 Build CASA-CMAKECI0-CTTM12-181 completed.
08-Mar-2023 00:40:09 Running on server: post build plugin 'NCover Results Collector'
08-Mar-2023 00:40:09 Running on server: post build plugin 'Build Hanging Detection Configuration'
08-Mar-2023 00:40:09 Running on server: post build plugin 'Clover Delta Calculator'
08-Mar-2023 00:40:09 Running on server: post build plugin 'Maven Dependencies Postprocessor'
08-Mar-2023 00:40:09 All post build plugins have finished
08-Mar-2023 00:40:09 Generating build results summary...
08-Mar-2023 00:40:10 Saving build results to disk...
08-Mar-2023 00:40:10 Store variable context...
08-Mar-2023 00:40:10 Indexing build results...
08-Mar-2023 00:40:10 Finished building CASA-CMAKECI0-CTTM12-181.