Build: #2 was successful

Job: Build and package OSX 12 Python3.8 was successful

Job result summary

Completed
Duration
113 minutes
Agent
cbt-osx1013-bld.cv.nrao.edu

Error summary

The build generated some errors. See the full build log for more details.

Updating files:  43% (3977/9190)
Updating files:  44% (4044/9190)
Updating files:  45% (4136/9190)
Updating files:  46% (4228/9190)
Updating files:  47% (4320/9190)
Updating files:  48% (4412/9190)
Updating files:  49% (4504/9190)
Updating files:  50% (4595/9190)
Updating files:  51% (4687/9190)
Updating files:  52% (4779/9190)
Updating files:  53% (4871/9190)
Updating files:  54% (4963/9190)
Updating files:  55% (5055/9190)
Updating files:  56% (5147/9190)
Updating files:  56% (5199/9190)
Updating files:  57% (5239/9190)
Updating files:  58% (5331/9190)
Updating files:  59% (5423/9190)
Updating files:  60% (5514/9190)
Updating files:  61% (5606/9190)
Updating files:  62% (5698/9190)
Updating files:  63% (5790/9190)
Updating files:  64% (5882/9190)
Updating files:  65% (5974/9190)
Updating files:  66% (6066/9190)
Updating files:  67% (6158/9190)
Updating files:  68% (6250/9190)
Updating files:  69% (6342/9190)
Updating files:  70% (6433/9190)
Updating files:  70% (6457/9190)
Updating files:  71% (6525/9190)
Updating files:  72% (6617/9190)
Updating files:  73% (6709/9190)
Updating files:  74% (6801/9190)
Updating files:  75% (6893/9190)
Updating files:  76% (6985/9190)
Updating files:  77% (7077/9190)
Updating files:  78% (7169/9190)
Updating files:  79% (7261/9190)
Updating files:  80% (7352/9190)
Updating files:  81% (7444/9190)
Updating files:  82% (7536/9190)
Updating files:  83% (7628/9190)
Updating files:  83% (7633/9190)
Updating files:  84% (7720/9190)
Updating files:  85% (7812/9190)
Updating files:  86% (7904/9190)
Updating files:  87% (7996/9190)
Updating files:  88% (8088/9190)
Updating files:  89% (8180/9190)
Updating files:  90% (8271/9190)
Updating files:  91% (8363/9190)
Updating files:  91% (8426/9190)
Updating files:  92% (8455/9190)
Updating files:  93% (8547/9190)
Updating files:  94% (8639/9190)
Updating files:  95% (8731/9190)
Updating files:  96% (8823/9190)
Updating files:  97% (8915/9190)
Updating files:  98% (9007/9190)
Updating files:  99% (9099/9190)
Updating files: 100% (9190/9190)
Updating files: 100% (9190/9190), done.
Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/casacore'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source'...
Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/abseil-cpp'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/benchmark'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/bloaty'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/boringssl'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/cares/cares'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/gflags'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/googletest'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/protobuf'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/zlib'...
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/gflags/doc'...
Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
Switched to a new branch 'CAS-13935'
Cloning into 'casashell'...
error: pathspec 'CAS-13935' did not match any file(s) known to git
/opt/local/Library/Frameworks/Python.framework/Versions/3.8/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/private/var/folders/_1/t4ckhc6n363cv0zl5rtcwbv40000gr/T/build-via-sdist-wykbzjga/casatools-6.5.6.11a13935.dev7/synthesisimagerPYTHON_wrap.cxx:2220:7: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
      0,                                    /* tp_print */
      ^
/opt/local/Library/Frameworks/Python.framework/Versions/3.8/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/opt/local/Library/Frameworks/Python.framework/Versions/3.8/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
3 warnings generated.
In file included from /private/var/folders/_1/t4ckhc6n363cv0zl5rtcwbv40000gr/T/build-via-sdist-wykbzjga/casatools-6.5.6.11a13935.dev7/src/tools/synthesisimager/synthesisimager_cmpt.cc:22:
In file included from /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacpp/synthesis/ImagerObjects/SynthesisImager.h:39:
In file included from /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacpp/synthesis/ImagerObjects/SIMapperCollection.h:38:
In file included from /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacpp/synthesis/ImagerObjects/SIMapper.h:40:
In file included from /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacpp/synthesis/TransformMachines/FTMachine.h:48:
In file included from /Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacpp/synthesis/Utilities/FFT2D.h:31:
/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casainstall/include/casacore/scimath/Mathematics/FFTPack.h:39:2: warning: "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW." [-W#warnings]
#warning "FFTPack is deprecated and will be removed in a future version of casacore. Please use FFTW."
^
1 warning generated.
ld: warning: -undefined dynamic_lookup may not work with chained fixups
/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/src/tools/build/build_env/lib/python3.8/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer, pypa/build or
        other standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/src/tools/build/build_env/lib/python3.8/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer, pypa/build or
        other standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
WARNING: You are using pip version 22.0.4; however, version 23.1.2 is available.
You should consider upgrading via the '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/src/tools/build/build_env/bin/python3 -m pip install --upgrade pip' command.
/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa6/casatools/src/tools/build/build_env/lib/python3.8/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer, pypa/build or
        other standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   652    0   652    0     0  21076      0 --:--:-- --:--:-- --:--:-- 25076
Cloning into 'casalith'...
warning: the following paths have collided (e.g. case-sensitive paths
on a case-insensitive filesystem) and only one from the same
colliding group is in the working tree:

  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc'
  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/orteCC'
  'build-casalith/work/linux/template/lib/mpi/bin/ortecc'
  'build-casalith/work/linux/template/lib/mpi/bin/vtCC'
  'build-casalith/work/linux/template/lib/mpi/bin/vtcc'
Submodule 'build-casalith/work/casa-pkg' (https://open-bitbucket.nrao.edu/scm/casa/casa-pkg.git) registered for path 'build-casalith/work/casa-pkg'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-CDBC20-BPOSX12PY38/casa-build-utils/cmakebuild/scripts/casalith/build-casalith/work/casa-pkg'...
error: pathspec 'CAS-13935' did not match any file(s) known to git
Can't open perl script "getdevpackagerevision.pl": No such file or directory
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   652    0   652    0     0    692      0 --:--:-- --:--:-- --:--:--   695
usage: mv [-f | -i | -n] [-hv] source target
       mv [-f | -i | -n] [-v] source ... directory
--> CrashReporter initialized.
Telemetry initialized. Telemetry will send anonymized usage statistics to NRAO.
You can disable telemetry by adding the following line to the config.py file in your rcdir (e.g. ~/.casa/config.py):
telemetry_enabled = False
hdiutil: detach failed - No such file or directory
fatal: destination path 'casa-build-utils' already exists and is not an empty directory.