Updating files:  48% (4426/9219)
Updating files:  49% (4518/9219)
Updating files:  50% (4610/9219)
Updating files:  51% (4702/9219)
Updating files:  51% (4772/9219)
Updating files:  52% (4794/9219)
Updating files:  53% (4887/9219)
Updating files:  54% (4979/9219)
Updating files:  55% (5071/9219)
Updating files:  56% (5163/9219)
Updating files:  57% (5255/9219)
Updating files:  58% (5348/9219)
Updating files:  58% (5370/9219)
Updating files:  59% (5440/9219)
Updating files:  60% (5532/9219)
Updating files:  61% (5624/9219)
Updating files:  62% (5716/9219)
Updating files:  63% (5808/9219)
Updating files:  64% (5901/9219)
Updating files:  65% (5993/9219)
Updating files:  65% (5996/9219)
Updating files:  66% (6085/9219)
Updating files:  67% (6177/9219)
Updating files:  68% (6269/9219)
Updating files:  69% (6362/9219)
Updating files:  70% (6454/9219)
Updating files:  71% (6546/9219)
Updating files:  71% (6550/9219)
Updating files:  72% (6638/9219)
Updating files:  73% (6730/9219)
Updating files:  74% (6823/9219)
Updating files:  75% (6915/9219)
Updating files:  76% (7007/9219)
Updating files:  77% (7099/9219)
Updating files:  77% (7126/9219)
Updating files:  78% (7191/9219)
Updating files:  79% (7284/9219)
Updating files:  80% (7376/9219)
Updating files:  81% (7468/9219)
Updating files:  82% (7560/9219)
Updating files:  82% (7567/9219)
Updating files:  83% (7652/9219)
Updating files:  84% (7744/9219)
Updating files:  85% (7837/9219)
Updating files:  85% (7882/9219)
Updating files:  86% (7929/9219)
Updating files:  87% (8021/9219)
Updating files:  88% (8113/9219)
Updating files:  89% (8205/9219)
Updating files:  89% (8241/9219)
Updating files:  90% (8298/9219)
Updating files:  91% (8390/9219)
Updating files:  92% (8482/9219)
Updating files:  93% (8574/9219)
Updating files:  94% (8666/9219)
Updating files:  94% (8667/9219)
Updating files:  95% (8759/9219)
Updating files:  96% (8851/9219)
Updating files:  97% (8943/9219)
Updating files:  98% (9035/9219)
Updating files:  98% (9104/9219)
Updating files:  99% (9127/9219)
Updating files: 100% (9219/9219)
Updating files: 100% (9219/9219), done.
Already on 'master'
Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/casacore'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source'...
Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/abseil-cpp'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/benchmark'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/bloaty'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/boringssl'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/cares/cares'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/gflags'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/googletest'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/protobuf'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/zlib'...
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/gflags/doc'...
Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
configure: WARNING: No working MPI compiler could be found, won't use MPI.
/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/venv/lib/python3.8/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
package init file 'build/lib.macosx-10.15-x86_64-3.8/casatasks/__xml__/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-10.15-x86_64-3.8/casatasks/private/__init__.py' not found (or not a regular file)
Already on 'master'
/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatasks/build/lib.macosx-10.15-x86_64-3.8/casatasks/private/task_sdimaging.py:204: SyntaxWarning: 'str' object is not callable; perhaps you missed a comma?
  raise RuntimeError("Invalid spw selction, %s ,for MS %d" (str(spw), file_idx))
/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatasks/build/lib.macosx-10.15-x86_64-3.8/casatasks/private/task_plotants.py:309: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if halign is 'center':
/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa6/casatasks/build/lib.macosx-10.15-x86_64-3.8/casatasks/private/task_plotants.py:351: SyntaxWarning: "is" with a literal. Did you mean "=="?
  if halign is 'center':
/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/venv/lib/python3.8/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
package init file 'build/lib.macosx-10.15-x86_64-3.8.1.final/casashell/private/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-10.15-x86_64-3.8.1.final/casashell/private/ttconfig/__init__.py' not found (or not a regular file)
WARNING: Skipping casadata as it is not installed.
WARNING: Skipping casatelemetry as it is not installed.
WARNING: Skipping casatools as it is not installed.
WARNING: Skipping casatasks as it is not installed.
WARNING: Skipping casashell as it is not installed.
WARNING: Skipping casaviewer as it is not installed.
WARNING: Skipping casaplotms as it is not installed.
WARNING: Skipping grpcio as it is not installed.
WARNING: Skipping protobuf as it is not installed.
Already on 'master'
Cloning into 'casalith'...
warning: the following paths have collided (e.g. case-sensitive paths
on a case-insensitive filesystem) and only one from the same
colliding group is in the working tree:

  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc'
  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/orteCC'
  'build-casalith/work/linux/template/lib/mpi/bin/ortecc'
  'build-casalith/work/linux/template/lib/mpi/bin/vtCC'
  'build-casalith/work/linux/template/lib/mpi/bin/vtcc'
Submodule 'build-casalith/work/casa-pkg' (https://open-bitbucket.nrao.edu/scm/casa/casa-pkg.git) registered for path 'build-casalith/work/casa-pkg'
Cloning into '/Users/casaci/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015P38/casa-build-utils/casalith/casalith/build-casalith/work/casa-pkg'...
Already on 'master'
--> CrashReporter initialized.
Telemetry initialized. Telemetry will send anonymized usage statistics to NRAO.
You can disable telemetry by adding the following line to the config.py file in your rcdir (e.g. ~/.casa/config.py):
telemetry_enabled = False
hdiutil: detach failed - No such file or directory
fatal: destination path 'casa-build-utils' already exists and is not an empty directory.