Updating files:  43% (4662/10840)
Updating files:  44% (4770/10840)
Updating files:  45% (4878/10840)
Updating files:  46% (4987/10840)
Updating files:  47% (5095/10840)
Updating files:  48% (5204/10840)
Updating files:  49% (5312/10840)
Updating files:  50% (5420/10840)
Updating files:  50% (5454/10840)
Updating files:  51% (5529/10840)
Updating files:  52% (5637/10840)
Updating files:  53% (5746/10840)
Updating files:  54% (5854/10840)
Updating files:  55% (5962/10840)
Updating files:  56% (6071/10840)
Updating files:  57% (6179/10840)
Updating files:  58% (6288/10840)
Updating files:  59% (6396/10840)
Updating files:  59% (6465/10840)
Updating files:  60% (6504/10840)
Updating files:  61% (6613/10840)
Updating files:  62% (6721/10840)
Updating files:  63% (6830/10840)
Updating files:  64% (6938/10840)
Updating files:  65% (7046/10840)
Updating files:  66% (7155/10840)
Updating files:  67% (7263/10840)
Updating files:  68% (7372/10840)
Updating files:  69% (7480/10840)
Updating files:  69% (7540/10840)
Updating files:  70% (7588/10840)
Updating files:  71% (7697/10840)
Updating files:  72% (7805/10840)
Updating files:  73% (7914/10840)
Updating files:  74% (8022/10840)
Updating files:  75% (8130/10840)
Updating files:  76% (8239/10840)
Updating files:  77% (8347/10840)
Updating files:  77% (8421/10840)
Updating files:  78% (8456/10840)
Updating files:  79% (8564/10840)
Updating files:  80% (8672/10840)
Updating files:  81% (8781/10840)
Updating files:  82% (8889/10840)
Updating files:  83% (8998/10840)
Updating files:  84% (9106/10840)
Updating files:  85% (9214/10840)
Updating files:  85% (9303/10840)
Updating files:  86% (9323/10840)
Updating files:  87% (9431/10840)
Updating files:  88% (9540/10840)
Updating files:  89% (9648/10840)
Updating files:  90% (9756/10840)
Updating files:  90% (9806/10840)
Updating files:  91% (9865/10840)
Updating files:  92% (9973/10840)
Updating files:  93% (10082/10840)
Updating files:  94% (10190/10840)
Updating files:  95% (10298/10840)
Updating files:  95% (10305/10840)
Updating files:  96% (10407/10840)
Updating files:  97% (10515/10840)
Updating files:  98% (10624/10840)
Updating files:  99% (10732/10840)
Updating files: 100% (10840/10840)
Updating files: 100% (10840/10840), done.
Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore'
Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/casacore'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source'...
Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp'
Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark'
Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty'
Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl'
Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel'
Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares'
Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags'
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest'
Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf'
Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/abseil-cpp'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/benchmark'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/bloaty'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/boringssl'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/cares/cares'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/gflags'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/googletest'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/protobuf'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/zlib'...
Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest'
Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'
Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'...
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'...
Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/gflags/doc'...
Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'...
package init file 'build/lib.macosx-10.14-x86_64-3.6/casatasks/__xml__/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-10.14-x86_64-3.6/casatasks/private/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-10.14-x86_64-3.6.10.final/casashell/private/__init__.py' not found (or not a regular file)
package init file 'build/lib.macosx-10.14-x86_64-3.6.10.final/casashell/private/ttconfig/__init__.py' not found (or not a regular file)
WARNING: Skipping casadata as it is not installed.
WARNING: Skipping casatelemetry as it is not installed.
WARNING: Skipping casatools as it is not installed.
WARNING: Skipping casatasks as it is not installed.
WARNING: Skipping casashell as it is not installed.
WARNING: Skipping casaviewer as it is not installed.
WARNING: Skipping casaplotms as it is not installed.
WARNING: Skipping grpcio as it is not installed.
WARNING: Skipping protobuf as it is not installed.
Cloning into 'casalith'...
warning: the following paths have collided (e.g. case-sensitive paths
on a case-insensitive filesystem) and only one from the same
colliding group is in the working tree:

  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc'
  'build-casalith/work/linux/template/lib/mpi/bin/mpiCC-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/mpicc-vt'
  'build-casalith/work/linux/template/lib/mpi/bin/orteCC'
  'build-casalith/work/linux/template/lib/mpi/bin/ortecc'
  'build-casalith/work/linux/template/lib/mpi/bin/vtCC'
  'build-casalith/work/linux/template/lib/mpi/bin/vtcc'
Submodule 'build-casalith/work/casa-pkg' (https://open-bitbucket.nrao.edu/scm/casa/casa-pkg.git) registered for path 'build-casalith/work/casa-pkg'
Cloning into '/Volumes/EXT/bamboohome/xml-data/build-dir/CASA-C6MP-O1/casa-build-utils/casalith/casalith/build-casalith/work/casa-pkg'...
Already on 'master'
hdiutil: detach failed - No such file or directory