Casa6

• 

  Ville Suoranta 05 Aug 2020 67c5891df67176a4cf20a7fb301f2abb8847184a

  Merge pull request #192 in CASA/casa6 from CAS-12502 to master
  * commit 'fc25ea2b11ac7c91a096bb1fd768c4731352cc75': (35 commits)
    Change simutil.imtclean restoringbeam to 'common' for CAS-12502
    Fix indexing in range function used by simanalyze for CAS-12502
    Remove extra ['value'] call in task_simanalyze for CAS-12502
    Support perplanebeams in task_simanalyze for CAS-12502
    Ensure simutil.imtclean respects pbcor parameter input for CAS-12502
    Remove pbcoverage file from expected outputs for CAS-12502
    Update test_req_task_simanalyze and task_simanalyze for CAS-12502
    Added test_req_task_simanalyze to the json file so that I can trigger Jenkins jobs in casa5
    Path to fix typo that caused build failure of 2c72003df9b for CAS-12502
    Another test patch, remove class setup methods into per-test setups for CAS-12502 and CAS-3669
    Squashed commit to hopefully fix test_req_task_simanalyze.py for CAS-12502 and CAS-3669
    Fix merge error in casatasks/src/scripts/simutil class docstring
    Replace the cleanhelper getOptimumSize method call with the more current synthesisutils tool in simutil for CAS-12502
    Update simanalyze task XML to move documentation from examples section to description sections for task and relevant parameters, for CAS-12502.
    Update simanalyze task XML to include shortdescription tags for each parameter.
    Rollback dbfb3af because deprecated clean is not implemented in CASA6...for CAS-12502
    Ensure input to cell parameter of imtclean method of simutil contains quantity object, for CAS-12502
    Decrease logging verbosity of simanalyze parameter ‘saveinputs’ and simutil method imtclean parameter ‘modelimage’, for CAS-12502
    Re-add import of clean task to simutil, just in case the deprecated imclean method is used again, for CAS-12502
    Update verbose logging logic and switch to imtclean method call (from imclean) in task_simanalyze, also choosing clark as the default deconvolver setting; for CAS-12502
    ...
• 

  Ville Suoranta 05 Aug 2020 7d274f3447917b61193f07292ab0290682e2402f

  Merge pull request #195 in CASA/casa6 from CAS-13105 to master
  * commit '8b9f5a19f154a7f6411eba2d9ae956505e51e596':
    Update build files for component_to_test_map.json
• 

  Akeem Wells <awells@humite.local> 04 Aug 2020 8b9f5a19f154a7f6411eba2d9ae956505e51e596 m

  Update build files for component_to_test_map.json

  • casa5/gcwrap/python/scripts/casatestutils/CMakeLists.txt (version 8b9f5a19f154a7f6411eba2d9ae956505e51e596) (diffs)
  • casatestutils/setup.py (version 8b9f5a19f154a7f6411eba2d9ae956505e51e596) (diffs)
• 

  Andrew McNichols 27 Jul 2020 fc25ea2b11ac7c91a096bb1fd768c4731352cc75 m

  Change simutil.imtclean restoringbeam to 'common' for CAS-12502
  Update the exceptions that fall back to central channel beam with a message for the log, even though they shouldn't be reached unless something changes

  • casa5/gcwrap/python/scripts/simutil.py (version fc25ea2b11ac7c91a096bb1fd768c4731352cc75) (diffs)
  • casa5/gcwrap/python/scripts/task_simanalyze.py (version fc25ea2b11ac7c91a096bb1fd768c4731352cc75) (diffs)
  • casatasks/src/scripts/simutil.py (version fc25ea2b11ac7c91a096bb1fd768c4731352cc75) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version fc25ea2b11ac7c91a096bb1fd768c4731352cc75) (diffs)
• 

  Andrew McNichols 26 Jul 2020 a1d484acb3eb6839492840e3483b5f4e91cefb41 m

  Fix indexing in range function used by simanalyze for CAS-12502

  • casa5/gcwrap/python/scripts/task_simanalyze.py (version a1d484acb3eb6839492840e3483b5f4e91cefb41) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version a1d484acb3eb6839492840e3483b5f4e91cefb41) (diffs)
• 

  Andrew McNichols 25 Jul 2020 08c4fb88bbb8cce8cfe40555cae5bb99db2a3f91 m

  Remove extra ['value'] call in task_simanalyze for CAS-12502

  • casa5/gcwrap/python/scripts/task_simanalyze.py (version 08c4fb88bbb8cce8cfe40555cae5bb99db2a3f91) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version 08c4fb88bbb8cce8cfe40555cae5bb99db2a3f91) (diffs)
• 

  Andrew McNichols 24 Jul 2020 e10cd18b092f69f7d9c36d95be762452c81bfaea m

  Support perplanebeams in task_simanalyze for CAS-12502
  Catch KeyError exceptions and introduce chan_index and pol_index to reference nested keys in dictionaries returned by image tool for three calculations of beam area and various inline accessors

  • casa5/gcwrap/python/scripts/task_simanalyze.py (version e10cd18b092f69f7d9c36d95be762452c81bfaea) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version e10cd18b092f69f7d9c36d95be762452c81bfaea) (diffs)
• 

  Andrew McNichols 24 Jul 2020 295faafeb5a6fad9c08b6831b9b39eda62c04377 m

  Ensure simutil.imtclean respects pbcor parameter input for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 295faafeb5a6fad9c08b6831b9b39eda62c04377) (diffs)
  • casatasks/src/scripts/simutil.py (version 295faafeb5a6fad9c08b6831b9b39eda62c04377) (diffs)
• 

  Andrew McNichols 24 Jul 2020 c961e95eaf45908cb3ed57dc1d3a4284ef79776d m

  Remove pbcoverage file from expected outputs for CAS-12502

  • casa5/gcwrap/tasks/simanalyze.xml (version c961e95eaf45908cb3ed57dc1d3a4284ef79776d) (diffs)
• 

  Andrew McNichols 24 Jul 2020 1fd9a1e2d0ecc8cb4a59b83f43f3429fd9b85ae9 m

  Merge branch 'master' into CAS-12502
  Conflicts:
          casa5/gcwrap/tasks/simanalyze.xml
  Reconciled 4cdbd0fa6f4 with 47cfc108999, the latter containing more extensive documentation updates from this branch which we want to preserve.
• 

  Andrew McNichols 05 Jun 2020 a1df8d9b65ba38b48d27bc5867a80964f86fcee1 m

  Update test_req_task_simanalyze and task_simanalyze for CAS-12502
  Enable test_imaging_True_interferometric
  Add concat, feather, and sdbeamutil imports to else conditional import section of simanalyze

  • casa5/gcwrap/python/scripts/task_simanalyze.py (version a1df8d9b65ba38b48d27bc5867a80964f86fcee1) (diffs)
  • casa5/gcwrap/python/scripts/tests/test_req_task_simanalyze.py (version a1df8d9b65ba38b48d27bc5867a80964f86fcee1) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version a1df8d9b65ba38b48d27bc5867a80964f86fcee1) (diffs)
  • casatasks/tests/tasks/test_req_task_simanalyze.py (version a1df8d9b65ba38b48d27bc5867a80964f86fcee1) (diffs)
• 

  Sandra Castro 29 May 2020 3f9927d46f39fe96adb9c7fd2e94233004ea55e9 m

  Added test_req_task_simanalyze to the json file so that I can trigger Jenkins jobs in casa5

  • casa5/gcwrap/python/scripts/tests/uTest_list.json (version 3f9927d46f39fe96adb9c7fd2e94233004ea55e9) (diffs)
• 

  Andrew McNichols 28 May 2020 c77726eee1a98d163499e64b2bb9a26268961cac m

  Path to fix typo that caused build failure of 2c72003df9b for CAS-12502

  • casa5/gcwrap/python/scripts/tests/test_req_task_simanalyze.py (version c77726eee1a98d163499e64b2bb9a26268961cac) (diffs)
  • casatasks/tests/tasks/test_req_task_simanalyze.py (version c77726eee1a98d163499e64b2bb9a26268961cac) (diffs)
• 

  Andrew McNichols 18 May 2020 2c72003df9ba108d35ae1ab3fa323f773f6311bb m

  Another test patch, remove class setup methods into per-test setups for CAS-12502 and CAS-3669

  • casa5/gcwrap/python/scripts/tests/test_req_task_simanalyze.py (version 2c72003df9ba108d35ae1ab3fa323f773f6311bb) (diffs)
  • casatasks/tests/tasks/test_req_task_simanalyze.py (version 2c72003df9ba108d35ae1ab3fa323f773f6311bb) (diffs)
• 

  Andrew McNichols 15 May 2020 c9ab213d7ec49895385e50290c44d6bdf7593c5b m

  Squashed commit to hopefully fix test_req_task_simanalyze.py for CAS-12502 and CAS-3669

  • casa5/gcwrap/python/scripts/tests/test_req_task_simanalyze.py (version c9ab213d7ec49895385e50290c44d6bdf7593c5b) (diffs)
  • casatasks/tests/tasks/test_req_task_simanalyze.py (version c9ab213d7ec49895385e50290c44d6bdf7593c5b) (diffs)
• 

  Andrew McNichols 07 May 2020 8685fdc94054af175fa25bf17b0b40cb04530c88 m

  Merge branch 'master' into CAS-12502
• 

  Andrew McNichols 09 Apr 2020 eeedde2053cb1fa13de78cacd23c60b1d978d2b5 m

  Merge branch 'master' into CAS-12502
  Pick up new test from CAS-3669
• 

  Andrew McNichols 10 Mar 2020 3590546ce902aab8c0e9fdc1a37036f59413bc26 m

  Fix merge error in casatasks/src/scripts/simutil class docstring

  • casatasks/src/scripts/simutil.py (version 3590546ce902aab8c0e9fdc1a37036f59413bc26) (diffs)
• 

  Andrew McNichols 10 Mar 2020 c977485416b9b6e935a8e008b3644ed18538efe5 m

  Merge branch 'master' into CAS-12502
• 

  Andrew McNichols 13 Dec 2019 c144a212983165a1c2859cd2e63b3db9893fe515 m

  Replace the cleanhelper getOptimumSize method call with the more current synthesisutils tool in simutil for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version c144a212983165a1c2859cd2e63b3db9893fe515) (diffs)
  • casatasks/src/scripts/simutil.py (version c144a212983165a1c2859cd2e63b3db9893fe515) (diffs)
• 

  Andrew McNichols 10 Dec 2019 0b8d2c11d6905f9205dae21ce056cf11016eadde m

  Update simanalyze task XML to move documentation from examples section to description sections for task and relevant parameters, for CAS-12502.

  • casa5/gcwrap/tasks/simanalyze.xml (version 0b8d2c11d6905f9205dae21ce056cf11016eadde) (diffs)
• 

  Andrew McNichols 10 Dec 2019 47cfc108999730f37ccffac4a8c033c895ec6a2c m

  Update simanalyze task XML to include shortdescription tags for each parameter.

  • casa5/gcwrap/tasks/simanalyze.xml (version 47cfc108999730f37ccffac4a8c033c895ec6a2c) (diffs)
• 

  Andrew McNichols 09 Dec 2019 489335416e27fe4601a37ff0fb87f277f41882e8 m

  Rollback dbfb3af because deprecated clean is not implemented in CASA6...for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 489335416e27fe4601a37ff0fb87f277f41882e8) (diffs)
  • casatasks/src/scripts/simutil.py (version 489335416e27fe4601a37ff0fb87f277f41882e8) (diffs)
• 

  Andrew McNichols 09 Dec 2019 caef98d28c811aa87eefea86dc110659bff0e098 m

  Ensure input to cell parameter of imtclean method of simutil contains quantity object, for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version caef98d28c811aa87eefea86dc110659bff0e098) (diffs)
  • casatasks/src/scripts/simutil.py (version caef98d28c811aa87eefea86dc110659bff0e098) (diffs)
• 

  Andrew McNichols 09 Dec 2019 7788bc2ebb7561544e346801c3bad18aca1a44e7 m

  Decrease logging verbosity of simanalyze parameter ‘saveinputs’ and simutil method imtclean parameter ‘modelimage’, for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 7788bc2ebb7561544e346801c3bad18aca1a44e7) (diffs)
  • casa5/gcwrap/python/scripts/task_simanalyze.py (version 7788bc2ebb7561544e346801c3bad18aca1a44e7) (diffs)
  • casatasks/src/scripts/simutil.py (version 7788bc2ebb7561544e346801c3bad18aca1a44e7) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version 7788bc2ebb7561544e346801c3bad18aca1a44e7) (diffs)
• 

  Andrew McNichols 09 Dec 2019 dbfb3af538566f6226d87def99dd93cf27154d26 m

  Re-add import of clean task to simutil, just in case the deprecated imclean method is used again, for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version dbfb3af538566f6226d87def99dd93cf27154d26) (diffs)
  • casatasks/src/scripts/simutil.py (version dbfb3af538566f6226d87def99dd93cf27154d26) (diffs)
• 

  Andrew McNichols 05 Dec 2019 e036ba9da4ef6c250e5afb60e05dc7aa6f885542 m

  Update verbose logging logic and switch to imtclean method call (from imclean) in task_simanalyze, also choosing clark as the default deconvolver setting; for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version e036ba9da4ef6c250e5afb60e05dc7aa6f885542) (diffs)
  • casa5/gcwrap/python/scripts/task_simanalyze.py (version e036ba9da4ef6c250e5afb60e05dc7aa6f885542) (diffs)
  • casatasks/src/scripts/simutil.py (version e036ba9da4ef6c250e5afb60e05dc7aa6f885542) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version e036ba9da4ef6c250e5afb60e05dc7aa6f885542) (diffs)
• 

  Andrew McNichols 05 Dec 2019 99acde5f5fb89de30c7074aea82f72e307952771 m

  Change cell parameter from string to list, specify threshold and interactive parameters in case of silly input, specify tclean call, specify verbose output in simutil method imtclean; for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 99acde5f5fb89de30c7074aea82f72e307952771) (diffs)
  • casatasks/src/scripts/simutil.py (version 99acde5f5fb89de30c7074aea82f72e307952771) (diffs)
• 

  Andrew McNichols 05 Dec 2019 d9ff15848998a0b0dd3806788db692e0870de4ab m

  Update docstrings and tclean.last formatting in imtclean method of simutil for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version d9ff15848998a0b0dd3806788db692e0870de4ab) (diffs)
  • casatasks/src/scripts/simutil.py (version d9ff15848998a0b0dd3806788db692e0870de4ab) (diffs)
• 

  Andrew McNichols 05 Dec 2019 0ab34718c4cd0b20b1649e1537d5c82a02fd29a3 m

  Merge branch 'master' into CAS-12502
• 

  Andrew McNichols 05 Dec 2019 5aaed9de4eeae5469a1152fca148aca680b86509 m

  Working version of simutil method imtclean when dryrun = True for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 5aaed9de4eeae5469a1152fca148aca680b86509) (diffs)
  • casatasks/src/scripts/simutil.py (version 5aaed9de4eeae5469a1152fca148aca680b86509) (diffs)
• 

  Andrew McNichols 04 Dec 2019 97c66ddd66d2eae49ede1a5d4acd35b670d36aae m

  Fix syntax error in tclean.last file writing section of simutil method imtclean for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 97c66ddd66d2eae49ede1a5d4acd35b670d36aae) (diffs)
  • casatasks/src/scripts/simutil.py (version 97c66ddd66d2eae49ede1a5d4acd35b670d36aae) (diffs)
• 

  Andrew McNichols 04 Dec 2019 d74e0bce743bb3dceeafbb41157f9f1221d422e3 m

  Change simutil method imtclean's input variable names from snake_case to smushcase for consistency with imclean method, and remove try/except blocks for debug of broken tclean.last file writing; for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version d74e0bce743bb3dceeafbb41157f9f1221d422e3) (diffs)
  • casatasks/src/scripts/simutil.py (version d74e0bce743bb3dceeafbb41157f9f1221d422e3) (diffs)
• 

  Andrew McNichols 04 Dec 2019 35accdc3dd51748ec8d2b9a658684f251e0b6827 m

  Changed 'deconvolver' to be a positional parameter in imtclean method of simutil for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 35accdc3dd51748ec8d2b9a658684f251e0b6827) (diffs)
  • casatasks/src/scripts/simutil.py (version 35accdc3dd51748ec8d2b9a658684f251e0b6827) (diffs)
• 

  Andrew McNichols 04 Dec 2019 d1288455b99bc5a3506625e7e50ff9fbef94fce0 m

  Add new variable to specify gridder parameter, plus commented-out call to new simutil method imtclean in task_simanalyze; for CAS-12502

  • casa5/gcwrap/python/scripts/task_simanalyze.py (version d1288455b99bc5a3506625e7e50ff9fbef94fce0) (diffs)
  • casatasks/src/tasks/task_simanalyze.py (version d1288455b99bc5a3506625e7e50ff9fbef94fce0) (diffs)
• 

  Andrew McNichols 04 Dec 2019 62053f09407c82c89982261e21bf1be358e6f3ee m

  Finish setting parameter defaults and continue updating tclean.last content logic in the new imtclean method of simutil, for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 62053f09407c82c89982261e21bf1be358e6f3ee) (diffs)
  • casatasks/src/scripts/simutil.py (version 62053f09407c82c89982261e21bf1be358e6f3ee) (diffs)
• 

  Andrew McNichols 04 Dec 2019 405503bc542ba75592033cb488b9d09eafc4c0ab m

  Update simutil method imclean docstring and duplicate method (imtclean) with the logic of tclean.last file writing and some paramter settings; for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version 405503bc542ba75592033cb488b9d09eafc4c0ab) (diffs)
  • casatasks/src/scripts/simutil.py (version 405503bc542ba75592033cb488b9d09eafc4c0ab) (diffs)
• 

  Andrew McNichols 03 Dec 2019 427f20ef4ec80ea36d5bf4a8fdd42fbde77f9d23 m

  Update new docstring for imclean method of simutil.py, add definition statement stub for new (duplicate) method imtclean, to preserve current functionality and allow for separate usage modes. For CAS-12502.

  • casa5/gcwrap/python/scripts/simutil.py (version 427f20ef4ec80ea36d5bf4a8fdd42fbde77f9d23) (diffs)
  • casatasks/src/scripts/simutil.py (version 427f20ef4ec80ea36d5bf4a8fdd42fbde77f9d23) (diffs)
• 

  Andrew McNichols 03 Dec 2019 bca1ae844fabf115e193754d9548b7bf32feebf8 m

  Add a (rough) docstring to simutil method imclean for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version bca1ae844fabf115e193754d9548b7bf32feebf8) (diffs)
  • casatasks/src/scripts/simutil.py (version bca1ae844fabf115e193754d9548b7bf32feebf8) (diffs)
• 

  Andrew McNichols 03 Dec 2019 d933ecb8b751104e81a5cba40e5093097914c6fc m

  Add default for imagermode variable in simutil imclean method to prevent UnboundLocalError for CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version d933ecb8b751104e81a5cba40e5093097914c6fc) (diffs)
  • casatasks/src/scripts/simutil.py (version d933ecb8b751104e81a5cba40e5093097914c6fc) (diffs)
• 

  Andrew McNichols 03 Dec 2019 dfe6a900cb1e632e9cae6876ca3968158fd7688a m

  Finish fixing imports to work in CASA6 as part of CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version dfe6a900cb1e632e9cae6876ca3968158fd7688a) (diffs)
  • casatasks/src/scripts/simutil.py (version dfe6a900cb1e632e9cae6876ca3968158fd7688a) (diffs)
• 

  Andrew McNichols 03 Dec 2019 c98cf6d5ded9d6ebaaa393cce4facdee1a81efb1 m

  Fix imports to work in casa6 as part of CAS-12502

  • casa5/gcwrap/python/scripts/simutil.py (version c98cf6d5ded9d6ebaaa393cce4facdee1a81efb1) (diffs)
  • casatasks/src/scripts/simutil.py (version c98cf6d5ded9d6ebaaa393cce4facdee1a81efb1) (diffs)
• 

  Andrew McNichols 03 Dec 2019 a3262fd1235583c80b8bb1f6c6796b8ce62cac90 m

  Update simutil class docstring to reflect accurate usage in CASA 6 as part of CAS-12502

  • casatasks/src/scripts/simutil.py (version a3262fd1235583c80b8bb1f6c6796b8ce62cac90) (diffs)