simple 06-Oct-2022 18:10:12 Build CASA - Casa 6 Master Package - OSX10.15 #421 (CASA-C6MP-OSX1015-421) started building on agent cbt-osx1015-bld-c6-2.cv.nrao.edu, bamboo version: 7.2.10 simple 06-Oct-2022 18:10:12 Remote agent on host cbt-osx1015-bld-c6-2.cv.nrao.edu simple 06-Oct-2022 18:10:12 Build working directory is /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015 simple 06-Oct-2022 18:10:12 Executing build CASA - Casa 6 Master Package - OSX10.15 #421 (CASA-C6MP-OSX1015-421) simple 06-Oct-2022 18:10:12 Starting task 'Clean working directory task' of type 'com.atlassian.bamboo.plugins.bamboo-artifact-downloader-plugin:cleanWorkingDirectoryTask' simple 06-Oct-2022 18:10:12 Cleaning working directory '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015' simple 06-Oct-2022 18:10:33 Finished task 'Clean working directory task' with result: Success simple 06-Oct-2022 18:10:33 Running pre-build action: VCS Version Collector simple 06-Oct-2022 18:10:33 Starting task 'Create wheel directory' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 06-Oct-2022 18:10:33 Beginning to execute external process for build 'CASA - Casa 6 Master Package - OSX10.15 #421 (CASA-C6MP-OSX1015-421)'\n ... running command line: \n/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-421-ScriptBuildTask-6338092864396287406.sh\n ... in: /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015\n simple 06-Oct-2022 18:10:33 Finished task 'Create wheel directory' with result: Success simple 06-Oct-2022 18:10:33 Starting task 'Download casatestutils' of type 'com.atlassian.bamboo.plugins.bamboo-artifact-downloader-plugin:artifactdownloadertask' simple 06-Oct-2022 18:10:33 Preparing to download plan result CASA-C6MP-421 artifact: Non required shared artifact: [casatestutils wheel], pattern: [*whl] anchored at: [wheeldirectory/] simple 06-Oct-2022 18:10:33 Artifact [casatestutils wheel] downloaded successfully in 41.60 ms to wheeldirectory/ simple 06-Oct-2022 18:10:33 Finished task 'Download casatestutils' with result: Success command 06-Oct-2022 18:10:33 Substituting variable: ${bamboo.repository.branch.name} with master command 06-Oct-2022 18:10:33 Substituting variable: ${bamboo.agentWorkingDirectory} with /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir command 06-Oct-2022 18:10:33 Substituting variable: ${bamboo.agentWorkingDirectory} with /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir simple 06-Oct-2022 18:10:33 Starting task 'Build Tools wheel' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 06-Oct-2022 18:10:33 Beginning to execute external process for build 'CASA - Casa 6 Master Package - OSX10.15 #421 (CASA-C6MP-OSX1015-421)'\n ... running command line: \n/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-421-ScriptBuildTask-206991185979856770.sh\n ... in: /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015\n error 06-Oct-2022 18:10:34 WARNING: Skipping casadata as it is not installed. error 06-Oct-2022 18:10:34 WARNING: Skipping casatelemetry as it is not installed. error 06-Oct-2022 18:10:35 WARNING: Skipping casatools as it is not installed. error 06-Oct-2022 18:10:35 WARNING: Skipping casatasks as it is not installed. error 06-Oct-2022 18:10:36 WARNING: Skipping casashell as it is not installed. error 06-Oct-2022 18:10:36 WARNING: Skipping casaviewer as it is not installed. error 06-Oct-2022 18:10:37 WARNING: Skipping casaplotms as it is not installed. error 06-Oct-2022 18:10:37 WARNING: Skipping grpcio as it is not installed. error 06-Oct-2022 18:10:38 WARNING: Skipping protobuf as it is not installed. build 06-Oct-2022 18:10:38 Set cache size limit to 100.0 GB error 06-Oct-2022 18:10:38 Cloning into 'casa-build-utils'... error 06-Oct-2022 18:10:38 Cloning into 'casa6'... error 06-Oct-2022 18:10:48 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error 06-Oct-2022 18:10:52 Updating files: 60% (5531/9217) error 06-Oct-2022 18:10:52 Updating files: 61% (5623/9217) error 06-Oct-2022 18:10:52 Updating files: 61% (5673/9217) error 06-Oct-2022 18:10:52 Updating files: 62% (5715/9217) error 06-Oct-2022 18:10:52 Updating files: 63% (5807/9217) error 06-Oct-2022 18:10:52 Updating files: 64% (5899/9217) error 06-Oct-2022 18:10:52 Updating files: 65% (5992/9217) error 06-Oct-2022 18:10:52 Updating files: 66% (6084/9217) error 06-Oct-2022 18:10:53 Updating files: 67% (6176/9217) error 06-Oct-2022 18:10:53 Updating files: 68% (6268/9217) error 06-Oct-2022 18:10:53 Updating files: 69% (6360/9217) error 06-Oct-2022 18:10:53 Updating files: 70% (6452/9217) error 06-Oct-2022 18:10:53 Updating files: 71% (6545/9217) error 06-Oct-2022 18:10:53 Updating files: 72% (6637/9217) error 06-Oct-2022 18:10:53 Updating files: 72% (6662/9217) error 06-Oct-2022 18:10:53 Updating files: 73% (6729/9217) error 06-Oct-2022 18:10:53 Updating files: 74% (6821/9217) error 06-Oct-2022 18:10:53 Updating files: 75% (6913/9217) error 06-Oct-2022 18:10:53 Updating files: 76% (7005/9217) error 06-Oct-2022 18:10:54 Updating files: 77% (7098/9217) error 06-Oct-2022 18:10:54 Updating files: 78% (7190/9217) error 06-Oct-2022 18:10:54 Updating files: 79% (7282/9217) error 06-Oct-2022 18:10:54 Updating files: 80% (7374/9217) error 06-Oct-2022 18:10:54 Updating files: 81% (7466/9217) error 06-Oct-2022 18:10:54 Updating files: 82% (7558/9217) error 06-Oct-2022 18:10:54 Updating files: 82% (7576/9217) error 06-Oct-2022 18:10:54 Updating files: 83% (7651/9217) error 06-Oct-2022 18:10:54 Updating files: 84% (7743/9217) error 06-Oct-2022 18:10:54 Updating files: 85% (7835/9217) error 06-Oct-2022 18:10:54 Updating files: 86% (7927/9217) error 06-Oct-2022 18:10:55 Updating files: 87% (8019/9217) error 06-Oct-2022 18:10:55 Updating files: 88% (8111/9217) error 06-Oct-2022 18:10:55 Updating files: 89% (8204/9217) error 06-Oct-2022 18:10:55 Updating files: 90% (8296/9217) error 06-Oct-2022 18:10:55 Updating files: 91% (8388/9217) error 06-Oct-2022 18:10:55 Updating files: 91% (8457/9217) error 06-Oct-2022 18:10:55 Updating files: 92% (8480/9217) error 06-Oct-2022 18:10:55 Updating files: 93% (8572/9217) error 06-Oct-2022 18:10:55 Updating files: 94% (8664/9217) error 06-Oct-2022 18:10:55 Updating files: 95% (8757/9217) error 06-Oct-2022 18:10:55 Updating files: 96% (8849/9217) error 06-Oct-2022 18:10:56 Updating files: 97% (8941/9217) error 06-Oct-2022 18:10:56 Updating files: 98% (9033/9217) error 06-Oct-2022 18:10:56 Updating files: 99% (9125/9217) error 06-Oct-2022 18:10:56 Updating files: 100% (9217/9217) error 06-Oct-2022 18:10:56 Updating files: 100% (9217/9217), done. error 06-Oct-2022 18:10:56 Submodule 'casatools/casacore' (https://github.com/casacore/casacore.git) registered for path 'casatools/casacore' error 06-Oct-2022 18:10:56 Submodule 'casatools/grpc-source' (https://github.com/grpc/grpc) registered for path 'casatools/grpc-source' error 06-Oct-2022 18:10:56 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/casacore'... error 06-Oct-2022 18:11:19 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source'... build 06-Oct-2022 18:12:15 Submodule path 'casatools/casacore': checked out 'ff766c49fdfddd34715fd017a08aaedcc01736e0' build 06-Oct-2022 18:12:17 Submodule path 'casatools/grpc-source': checked out 'cca868ac8f3641df4003a82b7fc54c921e14f765' error 06-Oct-2022 18:12:17 Submodule 'third_party/abseil-cpp' (https://github.com/abseil/abseil-cpp) registered for path 'casatools/grpc-source/third_party/abseil-cpp' error 06-Oct-2022 18:12:17 Submodule 'third_party/benchmark' (https://github.com/google/benchmark) registered for path 'casatools/grpc-source/third_party/benchmark' error 06-Oct-2022 18:12:17 Submodule 'third_party/bloaty' (https://github.com/google/bloaty.git) registered for path 'casatools/grpc-source/third_party/bloaty' error 06-Oct-2022 18:12:17 Submodule 'third_party/boringssl' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl' error 06-Oct-2022 18:12:17 Submodule 'third_party/boringssl-with-bazel' (https://github.com/google/boringssl.git) registered for path 'casatools/grpc-source/third_party/boringssl-with-bazel' error 06-Oct-2022 18:12:17 Submodule 'third_party/cares/cares' (https://github.com/c-ares/c-ares.git) registered for path 'casatools/grpc-source/third_party/cares/cares' error 06-Oct-2022 18:12:17 Submodule 'third_party/gflags' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags' error 06-Oct-2022 18:12:17 Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/googletest' error 06-Oct-2022 18:12:17 Submodule 'third_party/protobuf' (https://github.com/google/protobuf.git) registered for path 'casatools/grpc-source/third_party/protobuf' error 06-Oct-2022 18:12:17 Submodule 'third_party/zlib' (https://github.com/madler/zlib) registered for path 'casatools/grpc-source/third_party/zlib' error 06-Oct-2022 18:12:17 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/abseil-cpp'... error 06-Oct-2022 18:12:18 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/benchmark'... error 06-Oct-2022 18:12:19 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty'... error 06-Oct-2022 18:12:19 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/boringssl'... error 06-Oct-2022 18:12:39 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/boringssl-with-bazel'... error 06-Oct-2022 18:13:01 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/cares/cares'... error 06-Oct-2022 18:13:01 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/gflags'... error 06-Oct-2022 18:13:02 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/googletest'... error 06-Oct-2022 18:13:05 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/protobuf'... error 06-Oct-2022 18:13:17 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/zlib'... build 06-Oct-2022 18:13:18 Submodule path 'casatools/grpc-source/third_party/abseil-cpp': checked out 'cc4bed2d74f7c8717e31f9579214ab52a9c9c610' build 06-Oct-2022 18:13:18 Submodule path 'casatools/grpc-source/third_party/benchmark': checked out '5b7683f49e1e9223cf9927b24f6fd3d6bd82e3f8' build 06-Oct-2022 18:13:19 Submodule path 'casatools/grpc-source/third_party/bloaty': checked out '73594cde8c9a52a102c4341c244c833aa61b9c06' error 06-Oct-2022 18:13:19 Submodule 'third_party/googletest' (https://github.com/google/googletest.git) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/googletest' error 06-Oct-2022 18:13:19 Submodule 'third_party/libFuzzer' (https://chromium.googlesource.com/chromium/llvm-project/llvm/lib/Fuzzer) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer' error 06-Oct-2022 18:13:19 Submodule 'third_party/re2' (https://github.com/google/re2) registered for path 'casatools/grpc-source/third_party/bloaty/third_party/re2' error 06-Oct-2022 18:13:19 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/googletest'... error 06-Oct-2022 18:13:21 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/libFuzzer'... error 06-Oct-2022 18:13:22 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/bloaty/third_party/re2'... build 06-Oct-2022 18:13:23 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/googletest': checked out 'a2b8a8e07628e5fd60644b6dd99c1b5e7d7f1f47' build 06-Oct-2022 18:13:23 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/libFuzzer': checked out '1b543d6e5073b56be214394890c9193979a3d7e1' build 06-Oct-2022 18:13:23 Submodule path 'casatools/grpc-source/third_party/bloaty/third_party/re2': checked out 'c964d9b07816f9b52ca692e23b8b3dba33beec54' build 06-Oct-2022 18:13:24 Submodule path 'casatools/grpc-source/third_party/boringssl': checked out 'be2ee342d3781ddb954f91f8a7e660c6f59e87e5' build 06-Oct-2022 18:13:25 Submodule path 'casatools/grpc-source/third_party/boringssl-with-bazel': checked out '886e7d75368e3f4fab3f4d0d3584e4abfc557755' build 06-Oct-2022 18:13:25 Submodule path 'casatools/grpc-source/third_party/cares/cares': checked out '3be1924221e1326df520f8498d704a5c4c8d0cce' build 06-Oct-2022 18:13:26 Submodule path 'casatools/grpc-source/third_party/gflags': checked out '30dbc81fb5ffdc98ea9b14b1918bfe4e8779b26e' error 06-Oct-2022 18:13:26 Submodule 'doc' (https://github.com/gflags/gflags.git) registered for path 'casatools/grpc-source/third_party/gflags/doc' error 06-Oct-2022 18:13:26 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/gflags/doc'... build 06-Oct-2022 18:13:26 Submodule path 'casatools/grpc-source/third_party/gflags/doc': checked out '971dd2a4fadac9cdab174c523c22df79efd63aa5' build 06-Oct-2022 18:13:26 Submodule path 'casatools/grpc-source/third_party/googletest': checked out 'ec44c6c1675c25b9827aacd08c02433cccde7780' build 06-Oct-2022 18:13:27 Submodule path 'casatools/grpc-source/third_party/protobuf': checked out '2761122b810fe8861004ae785cc3ab39f384d342' error 06-Oct-2022 18:13:27 Submodule 'third_party/benchmark' (https://github.com/google/benchmark.git) registered for path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark' error 06-Oct-2022 18:13:27 Cloning into '/Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/grpc-source/third_party/protobuf/third_party/benchmark'... build 06-Oct-2022 18:13:28 Submodule path 'casatools/grpc-source/third_party/protobuf/third_party/benchmark': checked out '360e66c1c4777c99402cf8cd535aa510fee16573' build 06-Oct-2022 18:13:28 Submodule path 'casatools/grpc-source/third_party/zlib': checked out 'cacf7f1d4e3d44d871b605da3b647f07d718623f' build 06-Oct-2022 18:13:31 Looking in indexes: https://casa-pip.nrao.edu/repository/pypi-group/simple build 06-Oct-2022 18:13:31 Collecting pip build 06-Oct-2022 18:13:32 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/pip/20.1.1/pip-20.1.1-py2.py3-none-any.whl build 06-Oct-2022 18:13:32 Collecting certifi build 06-Oct-2022 18:13:32 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/certifi/2020.12.5/certifi-2020.12.5-py2.py3-none-any.whl build 06-Oct-2022 18:13:32 Installing collected packages: pip, certifi build 06-Oct-2022 18:13:32 Found existing installation: pip 18.1 build 06-Oct-2022 18:13:32 Uninstalling pip-18.1: build 06-Oct-2022 18:13:33 Successfully uninstalled pip-18.1 build 06-Oct-2022 18:13:34 Successfully installed certifi-2020.12.5 pip-20.1.1 build 06-Oct-2022 18:13:34 Looking in indexes: https://casa-pip.nrao.edu/repository/pypi-group/simple build 06-Oct-2022 18:13:35 Collecting numpy build 06-Oct-2022 18:13:35 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/numpy/1.18.4/numpy-1.18.4-cp36-cp36m-macosx_10_9_x86_64.whl (15.2 MB) build 06-Oct-2022 18:13:35 Collecting matplotlib build 06-Oct-2022 18:13:35 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/matplotlib/3.2.1/matplotlib-3.2.1-cp36-cp36m-macosx_10_9_x86_64.whl (12.4 MB) build 06-Oct-2022 18:13:36 Collecting scipy build 06-Oct-2022 18:13:36 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/scipy/1.4.1/scipy-1.4.1-cp36-cp36m-macosx_10_6_intel.whl (28.5 MB) build 06-Oct-2022 18:13:37 Collecting wheel build 06-Oct-2022 18:13:37 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/wheel/0.34.2/wheel-0.34.2-py2.py3-none-any.whl (26 kB) build 06-Oct-2022 18:13:37 Collecting kiwisolver>=1.0.1 build 06-Oct-2022 18:13:37 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/kiwisolver/1.2.0/kiwisolver-1.2.0-cp36-cp36m-macosx_10_9_x86_64.whl (60 kB) build 06-Oct-2022 18:13:37 Collecting cycler>=0.10 build 06-Oct-2022 18:13:37 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/cycler/0.10.0/cycler-0.10.0-py2.py3-none-any.whl (6.5 kB) build 06-Oct-2022 18:13:38 Collecting python-dateutil>=2.1 build 06-Oct-2022 18:13:38 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/python-dateutil/2.8.1/python_dateutil-2.8.1-py2.py3-none-any.whl (227 kB) build 06-Oct-2022 18:13:38 Collecting pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 build 06-Oct-2022 18:13:38 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/pyparsing/2.4.7/pyparsing-2.4.7-py2.py3-none-any.whl (67 kB) build 06-Oct-2022 18:13:38 Collecting six build 06-Oct-2022 18:13:38 Using cached https://casa-pip.nrao.edu/repository/pypi-group/packages/six/1.15.0/six-1.15.0-py2.py3-none-any.whl (10 kB) build 06-Oct-2022 18:13:38 Installing collected packages: numpy, kiwisolver, six, cycler, python-dateutil, pyparsing, matplotlib, scipy, wheel build 06-Oct-2022 18:13:47 Successfully installed cycler-0.10.0 kiwisolver-1.2.0 matplotlib-3.2.1 numpy-1.18.4 pyparsing-2.4.7 python-dateutil-2.8.1 scipy-1.4.1 six-1.15.0 wheel-0.34.2 build 06-Oct-2022 18:13:48 configure: host os is darwin build 06-Oct-2022 18:13:48 checking whether the C++ compiler works... yes build 06-Oct-2022 18:13:48 checking for C++ compiler default output file name... a.out build 06-Oct-2022 18:13:48 checking for suffix of executables... build 06-Oct-2022 18:13:49 checking whether we are cross compiling... no build 06-Oct-2022 18:13:49 checking for suffix of object files... o build 06-Oct-2022 18:13:49 checking whether we are using the GNU C++ compiler... yes build 06-Oct-2022 18:13:49 checking whether /usr/bin/c++ accepts -g... yes build 06-Oct-2022 18:13:49 checking for OpenMP flag of C++ compiler... unknown build 06-Oct-2022 18:13:49 checking for OpenMP flag of C++ compiler... (cached) unknown build 06-Oct-2022 18:13:49 configure: C++11 compiler /usr/bin/c++ build 06-Oct-2022 18:13:49 checking for std::defaultfloat... yes build 06-Oct-2022 18:13:49 configure: Looking for MPI compiler wrappers in extended path: /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/venv/bin:/bin:/var/root/bin/:/opt/casa/03/libexec/qt4/bin:/opt/casa/03/bin:/var/root/bin/:/opt/casa/03/libexec/qt4/bin:/opt/casa/03/bin:/var/root/bin/:/opt/casa/03/libexec/qt4/bin:/opt/casa/03/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/munki:/opt/X11/bin:/Library/Apple/usr/bin:/opt/casa/03/bin/ build 06-Oct-2022 18:13:49 checking for mpiCC,... no build 06-Oct-2022 18:13:49 checking for mpicxx,... no build 06-Oct-2022 18:13:49 checking for mpic++... no build 06-Oct-2022 18:13:49 configure: After looking for an MPI wrapper, the C++ compiler is: build 06-Oct-2022 18:13:49 checking for mpicc... no build 06-Oct-2022 18:13:49 configure: After looking for an MPI wrapper, the C compiler is: build 06-Oct-2022 18:13:49 checking whether to compile using MPI... yes build 06-Oct-2022 18:13:49 checking for mpic++... no build 06-Oct-2022 18:13:49 checking for mpicxx... no build 06-Oct-2022 18:13:49 checking for mpiCC... no build 06-Oct-2022 18:13:49 checking for sxmpic++... no build 06-Oct-2022 18:13:49 checking for hcp... no build 06-Oct-2022 18:13:49 checking for mpxlC_r... no build 06-Oct-2022 18:13:49 checking for mpxlC... no build 06-Oct-2022 18:13:49 checking for mpixlcxx_r... no build 06-Oct-2022 18:13:49 checking for mpixlcxx... no build 06-Oct-2022 18:13:49 checking for mpg++... no build 06-Oct-2022 18:13:49 checking for mpc++... no build 06-Oct-2022 18:13:49 checking for mpCC... no build 06-Oct-2022 18:13:49 checking for cmpic++... no build 06-Oct-2022 18:13:49 checking for mpiFCC... no build 06-Oct-2022 18:13:49 checking for CCicpc... no build 06-Oct-2022 18:13:49 checking for pgCC... no build 06-Oct-2022 18:13:50 checking for pathCC... no build 06-Oct-2022 18:13:50 checking for sxc++... no build 06-Oct-2022 18:13:50 checking for xlC_r... no build 06-Oct-2022 18:13:50 checking for xlC... no build 06-Oct-2022 18:13:50 checking for bgxlC_r... no build 06-Oct-2022 18:13:50 checking for bgxlC... no build 06-Oct-2022 18:13:50 checking for openCC... no build 06-Oct-2022 18:13:50 checking for sunCC... no build 06-Oct-2022 18:13:50 checking for crayCC... no build 06-Oct-2022 18:13:50 checking for g++... g++ build 06-Oct-2022 18:13:50 checking whether we are using the GNU C++ compiler... (cached) yes build 06-Oct-2022 18:13:50 checking whether g++ accepts -g... (cached) yes build 06-Oct-2022 18:13:50 checking for function MPI_Init... no build 06-Oct-2022 18:13:50 checking for function MPI_Init in -lmpi... no build 06-Oct-2022 18:13:50 checking for function MPI_Init in -lmpich... no error 06-Oct-2022 18:13:50 configure: WARNING: No working MPI compiler could be found, won't use MPI. build 06-Oct-2022 18:13:50 checking whether C++ compiler accepts -fcx-fortran-rules... no build 06-Oct-2022 18:13:50 checking for flags to support C++11 libc++... no build 06-Oct-2022 18:13:50 configure: c++ compiler is /usr/bin/c++ build 06-Oct-2022 18:13:50 configure: temporary directory /tmp/casatools-config-11419 build 06-Oct-2022 18:13:50 configure: creating /tmp/casatools-config-11419 build 06-Oct-2022 18:13:50 checking whether we are using the GNU C compiler... yes build 06-Oct-2022 18:13:50 checking whether /usr/bin/cc accepts -g... yes build 06-Oct-2022 18:13:50 checking for /usr/bin/cc option to accept ISO C89... none needed build 06-Oct-2022 18:13:50 configure: C compiler /usr/bin/cc build 06-Oct-2022 18:13:51 checking whether C compiler accepts -fcx-fortran-rules... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-9... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-8... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-5... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-4.9... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-4.8... no build 06-Oct-2022 18:13:51 checking for gfortran... no build 06-Oct-2022 18:13:51 checking whether we are using the GNU Fortran compiler... no build 06-Oct-2022 18:13:51 checking whether accepts -g... no build 06-Oct-2022 18:13:51 checking for gfortran-mp-9... gfortran-mp-9 build 06-Oct-2022 18:13:51 checking whether we are using the GNU Fortran compiler... (cached) no build 06-Oct-2022 18:13:51 checking whether gfortran-mp-9 accepts -g... (cached) no build 06-Oct-2022 18:13:51 configure: Fortran compiler /opt/casa/03/bin/gfortran-mp-9 build 06-Oct-2022 18:13:51 checking for ccache... /opt/casa/03/bin/ccache build 06-Oct-2022 18:13:51 checking for pread... yes build 06-Oct-2022 18:13:51 checking for pwrite... yes build 06-Oct-2022 18:13:51 checking for boostlib >= 1.41... yes build 06-Oct-2022 18:13:51 checking for python... /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/venv/bin/python build 06-Oct-2022 18:13:51 checking for a version of Python >= '2.1.0'... yes build 06-Oct-2022 18:13:51 checking for a version of Python >= '2.7.0'... yes build 06-Oct-2022 18:13:51 checking for the distutils Python package... yes build 06-Oct-2022 18:13:51 checking for Python include path... /opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/include/python3.6m build 06-Oct-2022 18:13:52 checking for Python library path... build 06-Oct-2022 18:13:52 checking for Python site-packages path... /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/venv/lib/python3.6/site-packages build 06-Oct-2022 18:13:52 checking python extra libraries... -ldl -framework CoreFoundation build 06-Oct-2022 18:13:52 checking python extra linking flags... -L/opt/casa/03/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/config-3.6m-darwin -lpython3.6m -ldl -framework CoreFoundation build 06-Oct-2022 18:13:52 checking consistency of all components of python development environment... yes build 06-Oct-2022 18:13:52 checking for python... /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/venv/bin/python build 06-Oct-2022 18:13:58 checking for numpy includedir... /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/venv/lib/python3.6/site-packages/numpy/core/include build 06-Oct-2022 18:13:59 checking whether linking to numpy library works... yes build 06-Oct-2022 18:13:59 checking for readline in -lreadline... yes build 06-Oct-2022 18:13:59 checking for flex... flex build 06-Oct-2022 18:13:59 checking lex output file root... lex.yy build 06-Oct-2022 18:13:59 checking lex library... none needed build 06-Oct-2022 18:13:59 checking whether yytext is a pointer... no build 06-Oct-2022 18:13:59 checking for bison... bison -y build 06-Oct-2022 18:13:59 checking if compiler needs -Werror to reject unknown flags... yes build 06-Oct-2022 18:13:59 checking whether pthreads work with -pthread... yes build 06-Oct-2022 18:13:59 checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE build 06-Oct-2022 18:13:59 checking if more special flags are required for pthreads... -D_THREAD_SAFE build 06-Oct-2022 18:13:59 checking for PTHREAD_PRIO_INHERIT... yes build 06-Oct-2022 18:13:59 checking for pkg-config... /opt/casa/03/bin/pkg-config build 06-Oct-2022 18:13:59 checking pkg-config is at least version 0.9.0... yes build 06-Oct-2022 18:13:59 checking how to run the C++ preprocessor... /usr/bin/c++ -E build 06-Oct-2022 18:14:00 checking for grep that handles long lines and -e... /usr/bin/grep build 06-Oct-2022 18:14:00 checking for egrep... /usr/bin/grep -E build 06-Oct-2022 18:14:00 checking for ANSI C header files... yes build 06-Oct-2022 18:14:00 checking for sys/types.h... yes build 06-Oct-2022 18:14:00 checking for sys/stat.h... yes build 06-Oct-2022 18:14:00 checking for stdlib.h... yes build 06-Oct-2022 18:14:00 checking for string.h... yes build 06-Oct-2022 18:14:00 checking for memory.h... yes build 06-Oct-2022 18:14:00 checking for strings.h... yes build 06-Oct-2022 18:14:00 checking for inttypes.h... yes build 06-Oct-2022 18:14:00 checking for stdint.h... yes build 06-Oct-2022 18:14:01 checking for unistd.h... yes build 06-Oct-2022 18:14:01 checking for CFITSIO... yes build 06-Oct-2022 18:14:01 checking for WCSLIB... yes build 06-Oct-2022 18:14:01 checking for rpfitsin_ in -lrpfits... no build 06-Oct-2022 18:14:01 checking for rpfitsin_ in -lrpfits... yes build 06-Oct-2022 18:14:01 checking for gsl-config... /opt/casa/03/bin/gsl-config build 06-Oct-2022 18:14:01 checking requested gsl version (2.0)... yes build 06-Oct-2022 18:14:01 checking for swig3... no build 06-Oct-2022 18:14:01 checking for swig... /opt/casa/03/bin/swig build 06-Oct-2022 18:14:01 checking swig version... 3.0.12 build 06-Oct-2022 18:14:01 checking requested swig version (3.0.0)... yes build 06-Oct-2022 18:14:01 checking for libxml2 library... yes build 06-Oct-2022 18:14:01 checking for EIGEN... yes build 06-Oct-2022 18:14:01 configure: removing /tmp/casatools-config-11419 build 06-Oct-2022 18:14:01 configure: creating ./config.status build 06-Oct-2022 18:14:01 config.status: creating build.properties build 06-Oct-2022 18:14:01 config.status: creating setup.py build 06-Oct-2022 18:14:02 _debug_build_: False build 06-Oct-2022 18:14:02 _rel_with_deb_info_: True build 06-Oct-2022 18:14:02 _strip_syms_: True build 06-Oct-2022 18:14:02 Using /opt/casa/03 for third party libraries build 06-Oct-2022 18:14:02 6.5.3.5 6.5.3.5 build 06-Oct-2022 18:14:02 build 06-Oct-2022 18:14:02 6.5.3.5 build 06-Oct-2022 18:14:02 6.5.3.5 build 06-Oct-2022 18:14:02 6 5 3 5 build 06-Oct-2022 18:14:02 6.5.3.5 build 06-Oct-2022 18:14:02 generating version header... build 06-Oct-2022 18:14:02 Traceback (most recent call last): build 06-Oct-2022 18:14:02 File "./setup.py", line 784, in build 06-Oct-2022 18:14:02 broken_autoconf_compiler_dir=os.path.realpath(join('build',distutils_dir_name('compilers'))) build 06-Oct-2022 18:14:02 File "./setup.py", line 336, in distutils_dir_name build 06-Oct-2022 18:14:02 from packaging import version as pversion build 06-Oct-2022 18:14:02 ModuleNotFoundError: No module named 'packaging' simple 06-Oct-2022 18:14:02 Finished task 'Build Tools wheel' with result: Success command 06-Oct-2022 18:14:02 Substituting variable: ${bamboo.repository.branch.name} with master command 06-Oct-2022 18:14:02 Substituting variable: ${bamboo.agentWorkingDirectory} with /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir command 06-Oct-2022 18:14:02 Substituting variable: ${bamboo.agentWorkingDirectory} with /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir simple 06-Oct-2022 18:14:02 Starting task 'Build Tasks wheel' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 06-Oct-2022 18:14:02 Beginning to execute external process for build 'CASA - Casa 6 Master Package - OSX10.15 #421 (CASA-C6MP-OSX1015-421)'\n ... running command line: \n/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-421-ScriptBuildTask-2368709318329889554.sh\n ... in: /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015\n build 06-Oct-2022 18:14:02 Set cache size limit to 100.0 GB build 06-Oct-2022 18:14:02 Building task wheel build 06-Oct-2022 18:14:02 Exception found when importing casatools: ModuleNotFoundError No module named 'casatools' simple 06-Oct-2022 18:14:02 Failing task since return code of [/Users/casaci/bamboohome/temp/CASA-C6MP-OSX1015-421-ScriptBuildTask-2368709318329889554.sh] was 1 while expected 0 simple 06-Oct-2022 18:14:02 Finished task 'Build Tasks wheel' with result: Failed simple 06-Oct-2022 18:14:02 Running post build plugin 'Docker Container Cleanup' simple 06-Oct-2022 18:14:02 Running post build plugin 'NCover Results Collector' simple 06-Oct-2022 18:14:02 Running post build plugin 'Clover Results Collector' simple 06-Oct-2022 18:14:02 Running post build plugin 'npm Cache Cleanup' simple 06-Oct-2022 18:14:02 Running post build plugin 'Artifact Copier' simple 06-Oct-2022 18:14:02 Publishing an artifact: OSX10.15 tools wheel error 06-Oct-2022 18:14:02 Unable to publish artifact [OSX10.15 tools wheel]: the source directory /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/dist does not exist. error 06-Oct-2022 18:14:02 The artifact is required, build will now fail. simple 06-Oct-2022 18:14:02 The artifact hasn't been successfully published after 510.9 μs simple 06-Oct-2022 18:14:02 Publishing an artifact: OSX10.15 tasks wheel error 06-Oct-2022 18:14:02 Unable to publish artifact [OSX10.15 tasks wheel]: the source directory /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatasks/dist does not exist. error 06-Oct-2022 18:14:02 The artifact is required, build will now fail. simple 06-Oct-2022 18:14:02 The artifact hasn't been successfully published after 178.0 μs simple 06-Oct-2022 18:14:02 Publishing an artifact: OSX10.15 shell wheel error 06-Oct-2022 18:14:02 Unable to publish artifact [OSX10.15 shell wheel]: the source directory /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casashell/dist does not exist. error 06-Oct-2022 18:14:02 The artifact is required, build will now fail. simple 06-Oct-2022 18:14:02 The artifact hasn't been successfully published after 144.8 μs simple 06-Oct-2022 18:14:02 Publishing an artifact: OSX10.15 DMG error 06-Oct-2022 18:14:02 Unable to publish artifact [OSX10.15 DMG]: error 06-Oct-2022 18:14:02 The artifact is required, build will now fail. simple 06-Oct-2022 18:14:02 The artifact hasn't been successfully published after 17.78 ms simple 06-Oct-2022 18:14:02 Publishing an artifact: debug_symbols_OSX1015 error 06-Oct-2022 18:14:02 Unable to publish artifact [debug_symbols_OSX1015]: the source directory /Volumes/G-RAIDWithThunderbolt/bamboohome/xml-data/build-dir/CASA-C6MP-OSX1015/casa6/casatools/debugsymbols does not exist. simple 06-Oct-2022 18:14:02 The artifact hasn't been successfully published after 201.5 μs simple 06-Oct-2022 18:14:02 Finalising the build... simple 06-Oct-2022 18:14:02 Stopping timer. simple 06-Oct-2022 18:14:02 Build CASA-C6MP-OSX1015-421 completed. simple 06-Oct-2022 18:14:02 Running on server: post build plugin 'NCover Results Collector' simple 06-Oct-2022 18:14:02 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 06-Oct-2022 18:14:02 Running on server: post build plugin 'Clover Delta Calculator' simple 06-Oct-2022 18:14:02 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 06-Oct-2022 18:14:02 All post build plugins have finished simple 06-Oct-2022 18:14:02 Generating build results summary... simple 06-Oct-2022 18:14:02 Saving build results to disk... simple 06-Oct-2022 18:14:02 Store variable context... simple 06-Oct-2022 18:14:02 Indexing build results... simple 06-Oct-2022 18:14:02 Finished building CASA-C6MP-OSX1015-421.