simple 02-Apr-2022 01:17:46 Build CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356) started building on agent cbt-el7-11.cv.nrao.edu, bamboo version: 7.2.4 simple 02-Apr-2022 01:17:46 Remote agent on host cbt-el7-11.cv.nrao.edu simple 02-Apr-2022 01:17:54 Build working directory is /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 simple 02-Apr-2022 01:17:54 Executing build CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356) simple 02-Apr-2022 01:17:54 Starting task 'Clean working directory task' of type 'com.atlassian.bamboo.plugins.bamboo-artifact-downloader-plugin:cleanWorkingDirectoryTask' simple 02-Apr-2022 01:17:54 Cleaning working directory '/export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38' simple 02-Apr-2022 01:18:05 Finished task 'Clean working directory task' with result: Success simple 02-Apr-2022 01:18:05 Running pre-build action: VCS Version Collector command 02-Apr-2022 01:18:13 Substituting variable: ${bamboo.planRepository.branchName} with master simple 02-Apr-2022 01:18:13 Starting task 'Clone casa6, shell and casa-build-utils' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:18:13 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-4801715304807958966.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n build 02-Apr-2022 01:18:13 branch: master build 02-Apr-2022 01:18:13 Cloning into 'casa-build-utils'... error 02-Apr-2022 01:18:23 Already on 'master' build 02-Apr-2022 01:18:23 /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 build 02-Apr-2022 01:18:23 Cloning into 'casa6'... error 02-Apr-2022 01:19:24 error: RPC failed; result=22, HTTP code = 502 error 02-Apr-2022 01:19:24 fatal: The remote end hung up unexpectedly error 02-Apr-2022 01:19:24 /export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-4801715304807958966.sh: line 15: cd: casa6: No such file or directory error 02-Apr-2022 01:19:24 fatal: Not a git repository (or any parent up to mount point /export/home/cbt-el7-11) error 02-Apr-2022 01:19:24 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). error 02-Apr-2022 01:19:24 fatal: Not a git repository (or any parent up to mount point /export/home/cbt-el7-11) error 02-Apr-2022 01:19:24 Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). build 02-Apr-2022 01:19:24 /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 build 02-Apr-2022 01:19:24 Cloning into 'casashell'... error 02-Apr-2022 01:19:40 Already on 'master' build 02-Apr-2022 01:19:40 /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 simple 02-Apr-2022 01:19:40 Finished task 'Clone casa6, shell and casa-build-utils' with result: Success command 02-Apr-2022 01:19:40 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:40 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 simple 02-Apr-2022 01:19:40 Starting task 'Docker' of type 'com.atlassian.bamboo.plugins.bamboo-docker-plugin:task.docker.cli' simple 02-Apr-2022 01:19:40 Running image name (casa-docker.nrao.edu:5000/casatools-manylinux2010-py38:2) command 02-Apr-2022 01:19:40 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/bin/docker run --volume /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/../ccache:/ccache --volume /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/source:/source --detach -v /opt/casa/data/master:/opt/casa/data:ro -v /opt/casa/data/casa-data-req:/opt/casa/data-req:ro --name build_container casa-docker.nrao.edu:5000/casatools-manylinux2010-py38:2 tail -f /dev/null\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n build 02-Apr-2022 01:19:41 94b28c424b3de43787cb3e0ae209a2d45c1ce56b2434101e039a85e28b238455 simple 02-Apr-2022 01:19:43 Finished task 'Docker' with result: Success simple 02-Apr-2022 01:19:43 Starting task 'Update casatestdata' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:19:43 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-8130823349848463270.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n error 02-Apr-2022 01:19:43 Already on 'master' build 02-Apr-2022 01:19:46 Already up-to-date. simple 02-Apr-2022 01:19:46 Finished task 'Update casatestdata' with result: Success simple 02-Apr-2022 01:19:46 Starting task 'Create wheel directory' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:19:46 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-4694104099888906747.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n simple 02-Apr-2022 01:19:47 Finished task 'Create wheel directory' with result: Success simple 02-Apr-2022 01:19:47 Starting task 'Get casatestutils' of type 'com.atlassian.bamboo.plugins.bamboo-artifact-downloader-plugin:artifactdownloadertask' simple 02-Apr-2022 01:19:47 Preparing to download plan result CASA-C6MP-356 artifact: Non required shared artifact: [casatestutils wheel], pattern: [*whl] anchored at: [wheeldirectory/] simple 02-Apr-2022 01:19:47 Artifact [casatestutils wheel] downloaded successfully in 87.64 ms to wheeldirectory/ simple 02-Apr-2022 01:19:47 Finished task 'Get casatestutils' with result: Success command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 command 02-Apr-2022 01:19:47 Substituting variable: ${bamboo.working.directory} with /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38 simple 02-Apr-2022 01:19:47 Starting task 'Build casa' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:19:47 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-3817186659607994936.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n build 02-Apr-2022 01:20:10 Executing: docker exec build_container /bin/bash -c "useradd -u 9285 casaci" build 02-Apr-2022 01:20:10 Executing: docker exec build_container /bin/bash -c "pip install certifi auditwheel numpy==1.18.4 scipy==1.4.1 matplotlib==3.2.1 " build 02-Apr-2022 01:20:10 Collecting certifi build 02-Apr-2022 01:20:10 Downloading certifi-2021.10.8-py2.py3-none-any.whl (149 kB) build 02-Apr-2022 01:20:10 Collecting auditwheel build 02-Apr-2022 01:20:10 Downloading auditwheel-5.1.2-py3-none-any.whl (53 kB) build 02-Apr-2022 01:20:10 Collecting numpy==1.18.4 build 02-Apr-2022 01:20:10 Downloading numpy-1.18.4-cp38-cp38-manylinux1_x86_64.whl (20.7 MB) build 02-Apr-2022 01:20:10 Collecting scipy==1.4.1 build 02-Apr-2022 01:20:10 Downloading scipy-1.4.1-cp38-cp38-manylinux1_x86_64.whl (26.0 MB) build 02-Apr-2022 01:20:10 Collecting matplotlib==3.2.1 build 02-Apr-2022 01:20:10 Downloading matplotlib-3.2.1-cp38-cp38-manylinux1_x86_64.whl (12.4 MB) build 02-Apr-2022 01:20:10 Collecting pyelftools>=0.24 build 02-Apr-2022 01:20:10 Downloading pyelftools-0.28-py2.py3-none-any.whl (155 kB) build 02-Apr-2022 01:20:10 Collecting kiwisolver>=1.0.1 build 02-Apr-2022 01:20:10 Downloading kiwisolver-1.4.2-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.whl (1.2 MB) build 02-Apr-2022 01:20:10 Collecting cycler>=0.10 build 02-Apr-2022 01:20:10 Downloading cycler-0.11.0-py3-none-any.whl (6.4 kB) build 02-Apr-2022 01:20:10 Collecting pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 build 02-Apr-2022 01:20:10 Downloading pyparsing-3.0.7-py3-none-any.whl (98 kB) build 02-Apr-2022 01:20:10 Collecting python-dateutil>=2.1 build 02-Apr-2022 01:20:10 Downloading python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB) build 02-Apr-2022 01:20:10 Collecting six>=1.5 build 02-Apr-2022 01:20:10 Downloading six-1.16.0-py2.py3-none-any.whl (11 kB) build 02-Apr-2022 01:20:10 Installing collected packages: certifi, pyelftools, auditwheel, numpy, scipy, kiwisolver, cycler, pyparsing, six, python-dateutil, matplotlib build 02-Apr-2022 01:20:10 Attempting uninstall: numpy build 02-Apr-2022 01:20:10 Found existing installation: numpy 1.18.0 build 02-Apr-2022 01:20:10 Uninstalling numpy-1.18.0: build 02-Apr-2022 01:20:10 Successfully uninstalled numpy-1.18.0 build 02-Apr-2022 01:20:10 Successfully installed auditwheel-5.1.2 certifi-2021.10.8 cycler-0.11.0 kiwisolver-1.4.2 matplotlib-3.2.1 numpy-1.18.4 pyelftools-0.28 pyparsing-3.0.7 python-dateutil-2.8.2 scipy-1.4.1 six-1.16.0 build 02-Apr-2022 01:20:10 WARNING: You are using pip version 20.2.3; however, version 22.0.4 is available. build 02-Apr-2022 01:20:10 You should consider upgrading via the '/opt/_internal/cpython-3.8.6/bin/python3.8 -m pip install --upgrade pip' command. build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "mkdir ~/.casa && mkdir -p ~/.config/pip" build 02-Apr-2022 01:20:10 Executing: docker cp /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/casa-build-utils/devbuild/config/config.py build_container:/home/casaci/.casa/config.py build 02-Apr-2022 01:20:10 Executing: docker cp /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/casa-build-utils/devbuild/config/pip.conf build_container:/home/casaci/.config/pip/pip.conf build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "ccache -M 50G" build 02-Apr-2022 01:20:10 Set cache size limit to 50.0 Gbytes build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "export CCACHE_DIR=/ccache && cd /source/casa6/casatools/ && autoconf && ./configure && python setup.py --relwithdebinfo --stripsyms bdist_wheel" build 02-Apr-2022 01:20:10 /bin/bash: line 0: cd: /source/casa6/casatools/: No such file or directory build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c 'cd /source/casa6/casatools/dist && auditwheel repair `ls -t *.whl | head -1`' build 02-Apr-2022 01:20:10 /bin/bash: line 0: cd: /source/casa6/casatools/dist: No such file or directory build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "export PYTHONPATH=/source/casa6/casatools/build/lib.linux-x86_64-3.8/ && cd /source/casa6/casatasks/ && python setup.py bdist_wheel" build 02-Apr-2022 01:20:10 /bin/bash: line 0: cd: /source/casa6/casatasks/: No such file or directory build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "export PYTHONPATH=/source/casa6/casatools/build/lib.linux-x86_64-3.8/:/source/casa6/casatasks/build/lib.linux-x86_64-3.8/ && cd /source/casashell/ && python setup.py bdist_wheel" build 02-Apr-2022 01:20:10 /bin/bash: line 0: cd: /source/casashell/: No such file or directory build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "mkdir /source/extralibs" build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "cp /usr/lib64/libgfortran.so.3 /source/extralibs" build 02-Apr-2022 01:20:10 Executing: docker exec -u casaci build_container /bin/bash -c "export PYTHONPATH=/source/casa6/casatools/build/lib.linux-x86_64-3.8:/source/casa6/casatasks/build/lib.linux-x86_64-3.8/ && cd /source/casa6/casatestutils && python setup.py build" build 02-Apr-2022 01:20:10 /bin/bash: line 0: cd: /source/casa6/casatestutils: No such file or directory error 02-Apr-2022 01:20:10 cp: cannot stat ‘/export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/source/casashell/dist/*.whl’: No such file or directory error 02-Apr-2022 01:20:10 cp: cannot stat ‘/export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/source/casa6/casatools/dist/wheelhouse/*.whl’: No such file or directory error 02-Apr-2022 01:20:10 cp: cannot stat ‘/export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38/source/casa6/casatasks/dist/*.whl’: No such file or directory simple 02-Apr-2022 01:20:10 Failing task since return code of [/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-3817186659607994936.sh] was 1 while expected 0 simple 02-Apr-2022 01:20:10 Finished task 'Build casa' with result: Failed simple 02-Apr-2022 01:20:10 Starting task 'Stop casalith-container' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:20:10 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-5251755374091617948.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n error 02-Apr-2022 01:20:10 Error response from daemon: No such container: casalith-container error 02-Apr-2022 01:20:10 Error: No such container: casalith-container build 02-Apr-2022 01:20:10 Removed casalith-container simple 02-Apr-2022 01:20:10 Finished task 'Stop casalith-container' with result: Success simple 02-Apr-2022 01:20:10 Starting task 'Stop build_container' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-Apr-2022 01:20:10 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/export/home/cbt-el7-11/bamboohome/temp/CASA-C6MP-LP38-356-ScriptBuildTask-7821792128008055464.sh\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n error 02-Apr-2022 01:20:10 Error response from daemon: No such container: build-container error 02-Apr-2022 01:20:10 Error: No such container: build-container build 02-Apr-2022 01:20:11 Removed casalith-container simple 02-Apr-2022 01:20:11 Finished task 'Stop build_container' with result: Success simple 02-Apr-2022 01:20:11 Running post build plugin 'Docker Container Cleanup' command 02-Apr-2022 01:20:11 Beginning to execute external process for build 'CASA - Casa 6 Master Package - Linux Python 3.8 #356 (CASA-C6MP-LP38-356)'\n ... running command line: \n/bin/docker rm -f build_container\n ... in: /export/home/cbt-el7-11/bamboohome/xml-data/build-dir/CASA-C6MP-LP38\n build 02-Apr-2022 01:20:23 build_container simple 02-Apr-2022 01:20:23 Running post build plugin 'NCover Results Collector' simple 02-Apr-2022 01:20:23 Running post build plugin 'Clover Results Collector' simple 02-Apr-2022 01:20:23 Running post build plugin 'npm Cache Cleanup' simple 02-Apr-2022 01:20:23 Running post build plugin 'Artifact Copier' simple 02-Apr-2022 01:20:23 Publishing an artifact: Linux 3.8 casatools error 02-Apr-2022 01:20:24 Unable to publish artifact [Linux 3.8 casatools]: error 02-Apr-2022 01:20:24 The artifact is required, build will now fail. simple 02-Apr-2022 01:20:24 The artifact hasn't been successfully published after 37.23 ms simple 02-Apr-2022 01:20:24 Publishing an artifact: Linux 3.8 casatasks error 02-Apr-2022 01:20:24 Unable to publish artifact [Linux 3.8 casatasks]: error 02-Apr-2022 01:20:24 The artifact is required, build will now fail. simple 02-Apr-2022 01:20:24 The artifact hasn't been successfully published after 11.97 ms simple 02-Apr-2022 01:20:24 Publishing an artifact: Linux 3.8 casashell error 02-Apr-2022 01:20:24 Unable to publish artifact [Linux 3.8 casashell]: error 02-Apr-2022 01:20:24 The artifact is required, build will now fail. simple 02-Apr-2022 01:20:24 The artifact hasn't been successfully published after 16.90 ms simple 02-Apr-2022 01:20:24 Publishing an artifact: Linux 3.8 tarball error 02-Apr-2022 01:20:24 Unable to publish artifact [Linux 3.8 tarball]: error 02-Apr-2022 01:20:24 The artifact is required, build will now fail. simple 02-Apr-2022 01:20:24 The artifact hasn't been successfully published after 11.88 ms simple 02-Apr-2022 01:20:24 Finalising the build... simple 02-Apr-2022 01:20:24 Stopping timer. simple 02-Apr-2022 01:20:24 Build CASA-C6MP-LP38-356 completed. simple 02-Apr-2022 01:20:59 Running on server: post build plugin 'NCover Results Collector' simple 02-Apr-2022 01:20:59 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 02-Apr-2022 01:20:59 Running on server: post build plugin 'Clover Delta Calculator' simple 02-Apr-2022 01:21:00 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 02-Apr-2022 01:21:00 All post build plugins have finished simple 02-Apr-2022 01:21:00 Generating build results summary... simple 02-Apr-2022 01:21:00 Saving build results to disk... simple 02-Apr-2022 01:21:00 Store variable context... simple 02-Apr-2022 01:21:00 Indexing build results... simple 02-Apr-2022 01:21:00 Finished building CASA-C6MP-LP38-356.