simple 02-May-2019 19:42:53 Build ARD - Build And Package - ARD-20 - Tag Branch for Packages #2 (ARD-BPT16-TBFP-2) started building on agent cbt-el7-4.cv.nrao.edu simple 02-May-2019 19:42:53 Remote agent on host cbt-el7-4.cv.nrao.edu simple 02-May-2019 19:42:53 Build working directory is /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP simple 02-May-2019 19:42:53 Executing build ARD - Build And Package - ARD-20 - Tag Branch for Packages #2 (ARD-BPT16-TBFP-2) simple 02-May-2019 19:42:53 Skipping execution of task 'Checkout Default Repository' as it is disabled simple 02-May-2019 19:42:53 Running pre-build action: VCS Version Collector simple 02-May-2019 19:42:53 Skipping execution of task 'Checkout Default Repository' as it is disabled command 02-May-2019 19:42:53 Substituting variable: ${bamboo.repository.branch.name} with ARD-20 command 02-May-2019 19:42:53 Substituting variable: ${bamboo.buildNumber} with 2 command 02-May-2019 19:42:53 Substituting variable: ${bamboo.planRepository.revision} with 661dc3b4e421927198db45ccdc85e3f9a420f7b1 command 02-May-2019 19:42:53 Substituting variable: ${bamboo.planRepository.repositoryUrl} with ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git command 02-May-2019 19:42:53 Substituting variable: ${bamboo.planRepository.repositoryUrl} with ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git command 02-May-2019 19:42:53 Substituting variable: ${bamboo.build.working.directory} with /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP command 02-May-2019 19:42:53 Substituting variable: ${bamboo.planRepository.repositoryUrl} with ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git command 02-May-2019 19:42:53 Substituting variable: ${bamboo.repository.branch.name} with ARD-20 command 02-May-2019 19:42:53 Substituting variable: ${bamboo.build.working.directory} with /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP command 02-May-2019 19:42:53 Substituting variable: ${bamboo.repository.branch.name} with ARD-20 command 02-May-2019 19:42:53 Substituting variable: ${bamboo.build.working.directory} with /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP command 02-May-2019 19:42:53 Substituting variable: ${bamboo.planRepository.repositoryUrl} with ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git simple 02-May-2019 19:42:53 Starting task 'Script' of type 'com.atlassian.bamboo.plugins.scripttask:task.builder.script' command 02-May-2019 19:42:53 Beginning to execute external process for build 'ARD - Build And Package - ARD-20 - Tag Branch for Packages #2 (ARD-BPT16-TBFP-2)'\n ... running command line: \n/bin/sh /export/home/cbt-el7-4/bamboohome/temp/ARD-BPT16-TBFP-2-ScriptBuildTask-7404263796674277641.sh\n ... in: /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP\n ... using extra environment variables: 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Branch for Packages\nbamboo_buildResultsUrl=https://open-bamboo.nrao.edu/browse/ARD-BPT16-TBFP-2\nbamboo_planRepository_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git\nbamboo_agentId=6160386\nbamboo_planName=ARD - Build And Package - 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Tag Branch for 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build 02-May-2019 19:42:53 2 build 02-May-2019 19:42:53 661dc3b4e421927198db45ccdc85e3f9a420f7b1 build 02-May-2019 19:42:53 ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git build 02-May-2019 19:42:54 Fetching origin error 02-May-2019 19:42:54 From https://open-bitbucket.nrao.edu/scm/casa/casa-pkg error 02-May-2019 19:42:54 f58f739..161216a master -> origin/master error 02-May-2019 19:42:54 12c6434..07aa08c CAS-11204-pkg -> origin/CAS-11204-pkg error 02-May-2019 19:42:54 * [new branch] release/5.5.0 -> origin/release/5.5.0 build 02-May-2019 19:42:56 Updating f58f739..161216a build 02-May-2019 19:42:56 Fast-forward build 02-May-2019 19:42:56 .../edu/nrao/gradle/casa/PackageNamePattern.groovy | 64 ++ build 02-May-2019 19:42:56 .../edu/nrao/gradle/casa/PackedDistro.groovy | 83 +- build 02-May-2019 19:42:56 .../main/groovy/edu/nrao/gradle/casa/Repo.groovy | 22 +- build 02-May-2019 19:42:56 .../edu/nrao/gradle/casa/UnpackedDistro.groovy | 38 +- build 02-May-2019 19:42:56 .../edu/nrao/gradle/casa/build/CasaApp.groovy | 46 +- build 02-May-2019 19:42:56 .../nrao/gradle/casa/build/GitRepository.groovy | 55 +- build 02-May-2019 19:42:56 .../gradle/casa/build/TagToPackageNameMap.groovy | 57 ++ build 02-May-2019 19:42:56 .../gradle/casa/functionaltests/TestCasaApp.groovy | 26 +- build 02-May-2019 19:42:56 .../casa/unittests/TestFileNameMatching.groovy | 3 +- build 02-May-2019 19:42:56 gradle/casa-build/build.git.bamboo.gradle | 84 +- build 02-May-2019 19:42:56 gradle/casa-build/build.gradle | 1067 -------------------- build 02-May-2019 19:42:56 gradle/casa-tag/build.gradle | 8 + build 02-May-2019 19:42:56 packaging/scripts/make-app | 239 +---- build 02-May-2019 19:42:56 packaging/scripts/make-release-dmg | 3 + build 02-May-2019 19:42:56 .../3007_IMPORTASAP.html} | 26 +- build 02-May-2019 19:42:56 testing/pybot-accepted/3015_IMPORTASDM_MMS.html | 142 +++ build 02-May-2019 19:42:56 .../3018_IMPORTATCA.html} | 27 +- build 02-May-2019 19:42:56 testing/pybot-accepted/3030_IMPORTFITSIDI.html | 142 +++ build 02-May-2019 19:42:56 .../3040_IMPORTMIRIAD.html} | 27 +- build 02-May-2019 19:42:56 .../3043_IMPORTNRO.html} | 26 +- build 02-May-2019 19:42:56 testing/pybot-accepted/3050_UVFITS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3110_CONJUGATEVIS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3120_CVEL.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3121_CVEL2.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3125_CVELFREQS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3131_HANNINGSMOOTH2.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3155_MSTRANSFORM_MMS.html | 142 +++ build 02-May-2019 19:42:56 .../3160_PARTITION.html} | 27 +- build 02-May-2019 19:42:56 testing/pybot-accepted/3171_OLD_STATWT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3173_TESTCONCAT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3180_UVCONTSUB3.html | 142 +++ build 02-May-2019 19:42:56 .../3185_VIRTUALCONCAT.html} | 28 +- build 02-May-2019 19:42:56 .../3415_CALTABCONVERT.html} | 29 +- build 02-May-2019 19:42:56 testing/pybot-accepted/3435_INITWEIGHTS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3437_REREFANT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3450_WVRGCAL.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3805_AGENTFLAGGER.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3810_FIXPLANETS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3820_FLAGCMD.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3827_FLAGHELPER.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/3830_FLAGMANAGER.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4305_PREDICTCOMP.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4515_SDFIT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4530_SDIMAGING.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4532_Sdimaging.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/4538_Sdsidebandsplit.html | 160 --- build 02-May-2019 19:42:56 testing/pybot-accepted/4545_SDSMOOTH.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4566_Tsdimaging.html | 159 --- build 02-May-2019 19:42:56 testing/pybot-accepted/4567_SDpolaverage.html | 159 --- build 02-May-2019 19:42:56 testing/pybot-accepted/4705_PLOTANTS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/4720_PLOTWEATHER.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5101_ASDMSUMMARY.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5119_LISTFITS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5120_LISTHISTORY.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5130_LISTPARTITION.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5133_LISTVIS.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5136_MSTOOL.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5137_MSVIEW.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5140_REPORT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5145_VISHEAD.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5155_VISSTAT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/5315_SPLATTOTABLE.html | 142 +++ build 02-May-2019 19:42:56 .../5603_IMCOLLAPSE.html} | 26 +- build 02-May-2019 19:42:56 testing/pybot-accepted/5606_Immath.html | 159 --- build 02-May-2019 19:42:56 testing/pybot-accepted/5805_SIMOBSERVE.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6410_CLEAN.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6415_CLEANHELPER.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6445_Refimager.html | 160 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6905_MPI_APPLYCAL.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6905_MPI_Applycal.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6909_MPI_CVEL.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6909_MPI_Cvel.html | 160 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6910_MPI_CVEL2.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6910_MPI_Cvel2.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6915_MPI_HANNINGSMOOTH.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6915_MPI_Hanningsmooth.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6920_MPI_IMPORTASDM.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6920_MPI_Importasdm.html | 161 --- build 02-May-2019 19:42:56 .../pybot-accepted/6925_MPI_IMPORTASDM_MMS.html | 142 +++ build 02-May-2019 19:42:56 .../pybot-accepted/6925_MPI_Importasdm_Mms.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6930_MPI_Mpi4Casa.html | 161 --- build 02-May-2019 19:42:56 .../pybot-accepted/6935_MPI_MSTRANSFORM_MMS.html | 142 +++ build 02-May-2019 19:42:56 .../pybot-accepted/6935_MPI_Mstransform_Mms.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6940_MPI_PARTITION.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6940_MPI_Partition.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6945_MPI_Refimager.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/6950_MPI_SPLIT.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/6950_MPI_Split.html | 161 --- build 02-May-2019 19:42:56 testing/pybot-accepted/8306_3C391POLIM.html | 142 +++ build 02-May-2019 19:42:56 .../8309_3C129.html | 28 +- build 02-May-2019 19:42:56 testing/pybot-accepted/8312_3C219D_TEST.html | 142 +++ build 02-May-2019 19:42:56 .../8315_ACCUM_TEST.html} | 29 +- build 02-May-2019 19:42:56 ...tml => 8318_ALMA_M100_ANALYSIS_REGRESSION.html} | 31 +- build 02-May-2019 19:42:56 .../8319_ALMA_M100_ANALYSIS_REGRESSION_TCLEAN.html | 142 +++ build 02-May-2019 19:42:56 .../8319_Alma_M100_Analysis_Regression_tclean.html | 161 --- build 02-May-2019 19:42:56 .../8321_ALMA_M100_SD_REGRESSION.html | 142 +++ build 02-May-2019 19:42:56 .../8321_Alma_M100_Sd_Regression.html | 161 --- build 02-May-2019 19:42:56 ...l => 8327_ALMA_TITAN_EPHEMERIS_REGRESSION.html} | 29 +- build 02-May-2019 19:42:56 ...lysis.html => 8330_ASDM-IMEXPORT+ANALYSIS.html} | 29 +- build 02-May-2019 19:42:56 .../8333_ASYNC-SEGFAULT.html} | 29 +- build 02-May-2019 19:42:56 .../8336_CALSTAT_TEST.html} | 28 +- build 02-May-2019 19:42:56 testing/pybot-accepted/8339_CLEANHELPER_TEST.html | 142 +++ build 02-May-2019 19:42:56 testing/pybot-accepted/8342_CLEANCHAN_TEST.html | 142 +++ build 02-May-2019 19:42:56 .../8345_COORDSYSTEST.html} | 29 +- build 02-May-2019 19:42:56 .../8348_CVEL_TEST.html} | 28 +- build 02-May-2019 19:42:56 testing/pybot-accepted/8351_EQUINOX_VIS.html | 142 +++ build 02-May-2019 19:42:56 .../8354_FITS-IMPORT-EXPORT.html} | 29 +- build 02-May-2019 19:42:56 .../8360_H121.html | 28 +- build 02-May-2019 19:42:56 .../8363_IC2233.html} | 27 +- build 02-May-2019 19:42:56 .../8366_IMAGEPOLTEST.html} | 30 +- build 02-May-2019 19:42:56 .../8369_IMAGETEST.html} | 29 +- build 02-May-2019 19:42:56 .../8375_L02D.html | 28 +- build 02-May-2019 19:42:56 .../8378_LISTCAL.html} | 29 +- build 02-May-2019 19:42:56 .../8381_LISTVIS.html} | 28 +- build 02-May-2019 19:42:56 .../8384_NGC2403.html} | 27 +- build 02-May-2019 19:42:56 .../8387_NGC5921REDUX.html} | 29 +- build 02-May-2019 19:42:56 testing/pybot-accepted/8396_ORIONMOS4SIM.html | 142 +++ build 02-May-2019 19:42:56 .../8402_POINTING_TEST.html} | 27 +- build 02-May-2019 19:42:56 .../8405_POLCAL_20080224CBAND.html} | 28 +- build 02-May-2019 19:42:56 .../8408_PYLABMEM.html} | 28 +- build 02-May-2019 19:42:56 testing/pybot-accepted/8411_SIM_M51C.html | 142 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error 02-May-2019 19:43:12 * [new tag] 5.5.0-55-test-CAS-8418-4 -> 5.5.0-55-test-CAS-8418-4 error 02-May-2019 19:43:12 * [new tag] 5.5.0-69-test-CAS-7210-13 -> 5.5.0-69-test-CAS-7210-13 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-10 -> 5.5.0-94-test-ARD-15-10 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-144 -> 5.5.0-mas-144 error 02-May-2019 19:43:12 * [new tag] 5.5.0-rel-145 -> 5.5.0-rel-145 error 02-May-2019 19:43:12 * [new tag] 5.5.0-rel-147 -> 5.5.0-rel-147 error 02-May-2019 19:43:12 * [new tag] 5.6.0-mas-1 -> 5.6.0-mas-1 error 02-May-2019 19:43:12 * [new tag] 5.6.0-mas-3 -> 5.6.0-mas-3 error 02-May-2019 19:43:12 * [new tag] bugfix-CAS-12441-2 -> bugfix-CAS-12441-2 error 02-May-2019 19:43:12 * [new tag] test-CAS-12439-1 -> test-CAS-12439-1 error 02-May-2019 19:43:12 From ssh://open-bitbucket.nrao.edu:7999/casa/casa error 02-May-2019 19:43:12 * [new tag] 5.3.0-61-test-CAS-9094-7 -> 5.3.0-61-test-CAS-9094-7 error 02-May-2019 19:43:12 * [new tag] 5.4.0-43-test-CAS-10593-7 -> 5.4.0-43-test-CAS-10593-7 error 02-May-2019 19:43:12 * [new tag] 5.5.0-108-feature-CAS-12325-3 -> 5.5.0-108-feature-CAS-12325-3 error 02-May-2019 19:43:12 * [new tag] 5.5.0-108-feature-CAS-12325-4 -> 5.5.0-108-feature-CAS-12325-4 error 02-May-2019 19:43:12 * [new tag] 5.5.0-125-test-CAS-12364-8 -> 5.5.0-125-test-CAS-12364-8 error 02-May-2019 19:43:12 * [new tag] 5.5.0-125-test-CAS-12364-9 -> 5.5.0-125-test-CAS-12364-9 error 02-May-2019 19:43:12 * [new tag] 5.5.0-132-test-CAS-12391-1 -> 5.5.0-132-test-CAS-12391-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-132-test-CAS-12394-1 -> 5.5.0-132-test-CAS-12394-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-133-test-CAS-12396-1 -> 5.5.0-133-test-CAS-12396-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-134-bugfix-CAS-12411-1 -> 5.5.0-134-bugfix-CAS-12411-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-134-bugfix-CAS-9842-1 -> 5.5.0-134-bugfix-CAS-9842-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-134-test-CAS-12407-1 -> 5.5.0-134-test-CAS-12407-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-134-test-CAS-12410-1 -> 5.5.0-134-test-CAS-12410-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-138-bugfix-CAS-12389-1 -> 5.5.0-138-bugfix-CAS-12389-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-138-test-CAS-12413-1 -> 5.5.0-138-test-CAS-12413-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-138-test-CAS-12414-1 -> 5.5.0-138-test-CAS-12414-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-140-test-CAS-12418-1 -> 5.5.0-140-test-CAS-12418-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-144-test-CAS-12435-1 -> 5.5.0-144-test-CAS-12435-1 error 02-May-2019 19:43:12 * [new tag] 5.5.0-33-bugfix-CAS-11868-5 -> 5.5.0-33-bugfix-CAS-11868-5 error 02-May-2019 19:43:12 * [new tag] 5.5.0-55-test-CAS-8418-3 -> 5.5.0-55-test-CAS-8418-3 error 02-May-2019 19:43:12 * [new tag] 5.5.0-69-test-CAS-7210-10 -> 5.5.0-69-test-CAS-7210-10 error 02-May-2019 19:43:12 * [new tag] 5.5.0-69-test-CAS-7210-11 -> 5.5.0-69-test-CAS-7210-11 error 02-May-2019 19:43:12 * [new tag] 5.5.0-69-test-CAS-7210-12 -> 5.5.0-69-test-CAS-7210-12 error 02-May-2019 19:43:12 * [new tag] 5.5.0-69-test-CAS-7210-9 -> 5.5.0-69-test-CAS-7210-9 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-5 -> 5.5.0-94-test-ARD-15-5 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-6 -> 5.5.0-94-test-ARD-15-6 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-7 -> 5.5.0-94-test-ARD-15-7 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-8 -> 5.5.0-94-test-ARD-15-8 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-15-9 -> 5.5.0-94-test-ARD-15-9 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-16-3 -> 5.5.0-94-test-ARD-16-3 error 02-May-2019 19:43:12 * [new tag] 5.5.0-94-test-ARD-16-4 -> 5.5.0-94-test-ARD-16-4 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-133 -> 5.5.0-mas-133 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-134 -> 5.5.0-mas-134 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-135 -> 5.5.0-mas-135 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-136 -> 5.5.0-mas-136 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-137 -> 5.5.0-mas-137 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-138 -> 5.5.0-mas-138 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-139 -> 5.5.0-mas-139 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-140 -> 5.5.0-mas-140 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-141 -> 5.5.0-mas-141 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-142 -> 5.5.0-mas-142 error 02-May-2019 19:43:12 * [new tag] 5.5.0-mas-143 -> 5.5.0-mas-143 error 02-May-2019 19:43:12 * [new tag] 5.5.0-rel-146 -> 5.5.0-rel-146 error 02-May-2019 19:43:12 * [new tag] 5.6.0-mas-2 -> 5.6.0-mas-2 error 02-May-2019 19:43:12 * [new tag] bugfix-CAS-12441-1 -> bugfix-CAS-12441-1 build 02-May-2019 19:43:13 Updating 32072d8..edffa36 build 02-May-2019 19:43:13 Fast-forward build 02-May-2019 19:43:13 code/CMakeLists.txt | 8 +- build 02-May-2019 19:43:13 code/VERSION.in | 2 +- build 02-May-2019 19:43:13 code/casaqt/QwtPlotter/QPExporter.cc | 2 +- build 02-May-2019 19:43:13 code/casaqt/QwtPlotter/QPScatterPlot.cc | 2 +- build 02-May-2019 19:43:13 code/casatools/CMakeLists.txt | 5 + build 02-May-2019 19:43:13 code/casatools/Config/State.h | 4 +- build 02-May-2019 19:43:13 code/casatools/Data/Opt.h | 56 + build 02-May-2019 19:43:13 code/casatools/Proc/Registrar.cc | 80 +- build 02-May-2019 19:43:13 code/casatools/Proc/Registrar.h | 22 +- build 02-May-2019 19:43:13 code/casatools/protos/registrar.proto | 8 +- build 02-May-2019 19:43:13 code/casatools/protos/shutdown.proto | 11 + build 02-May-2019 19:43:13 code/display/Display/MultiWCHolder.cc | 2 +- build 02-May-2019 19:43:13 code/display/DisplayDatas/MSAsRaster.cc | 4 +- build 02-May-2019 19:43:13 .../display/QtPlotter/MomentSettingsWidgetRadio.cc | 2 +- build 02-May-2019 19:43:13 .../QtPlotter/SpecFitSettingsWidgetRadio.cc | 8 +- build 02-May-2019 19:43:13 code/display/QtViewer/QtViewer.cc | 186 +- build 02-May-2019 19:43:13 code/display/QtViewer/QtViewer.qo.h | 20 +- build 02-May-2019 19:43:13 code/display/QtViewer/grpcViewerAdaptor.cc | 125 + build 02-May-2019 19:43:13 code/display/QtViewer/grpcViewerAdaptor.qo.h | 206 + build 02-May-2019 19:43:13 code/display/RegionShapes/RSUtils.cc | 4 +- build 02-May-2019 19:43:13 code/display/Slicer/ImageSlice.cc | 2 +- build 02-May-2019 19:43:13 code/display/apps/casaviewer/casaviewer.cc | 66 +- build 02-May-2019 19:43:13 code/display/protos/img.proto | 20 + build 02-May-2019 19:43:13 code/flagging/Flagging/FlagAgentBase.cc | 5 + build 02-May-2019 19:43:13 code/flagging/Flagging/FlagCalTableHandler.cc | 12 +- build 02-May-2019 19:43:13 code/flagging/Flagging/FlagMSHandler.cc | 16 +- build 02-May-2019 19:43:13 code/install/resolvegitrevision.pl | 119 + build 02-May-2019 19:43:13 code/miriad/apps/carmafiller/carmafiller.cc | 2 +- build 02-May-2019 19:43:13 code/mstransform/TVI/StatWtTVI.cc | 42 +- build 02-May-2019 19:43:13 code/msvis/MSVis/VisBufferUtil.cc | 156 +- build 02-May-2019 19:43:13 code/msvis/MSVis/VisImagingWeight.cc | 154 +- build 02-May-2019 19:43:13 code/msvis/MSVis/VisImagingWeight.h | 18 +- build 02-May-2019 19:43:13 code/plotms/Actions/ActionExport.cc | 2 +- build 02-May-2019 19:43:13 code/plotms/Data/PlotMSIndexer.cc | 4 +- build 02-May-2019 19:43:13 code/plotms/Plots/PlotMSPlot.cc | 2 +- build 02-May-2019 19:43:13 code/stdcasa/version.cc.in | 23 +- build 02-May-2019 19:43:13 code/stdcasa/version.h | 7 +- build 02-May-2019 19:43:13 code/synthesis/CMakeLists.txt | 1 + build 02-May-2019 19:43:13 code/synthesis/ImagerObjects/SDAlgorithmBase.cc | 2 +- build 02-May-2019 19:43:13 code/synthesis/ImagerObjects/SDMaskHandler.cc | 11 +- build 02-May-2019 19:43:13 code/synthesis/ImagerObjects/SIImageStore.cc | 9 +- build 02-May-2019 19:43:13 code/synthesis/MeasurementEquations/Imager2.cc | 11 +- build 02-May-2019 19:43:13 code/synthesis/MeasurementEquations/SkyEquation.cc | 25 +- build 02-May-2019 19:43:13 .../MeasurementEquations/test/tPredictComp.cc | 105 + build 02-May-2019 19:43:13 code/synthesis/TransformMachines/BeamSkyJones.cc | 97 +- build 02-May-2019 19:43:13 code/synthesis/TransformMachines/BeamSkyJones.h | 15 +- build 02-May-2019 19:43:13 code/synthesis/TransformMachines/SkyJones.h | 4 +- build 02-May-2019 19:43:13 code/synthesis/TransformMachines2/BeamSkyJones.cc | 12 +- build 02-May-2019 19:43:13 code/synthesis/TransformMachines2/BeamSkyJones.h | 2 +- build 02-May-2019 19:43:13 gcwrap/CMakeLists.txt | 2 +- build 02-May-2019 19:43:13 gcwrap/install/pipeline.bld | 2 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/casa_system.py | 3 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/init_crashrpt.py | 2 + build 02-May-2019 19:43:13 gcwrap/python/scripts/init_docs.py | 15 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/init_logger.py | 2 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/init_system.py | 2 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/init_telemetry.py.in | 3 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/init_welcome.py | 2 +- build 02-May-2019 19:43:13 .../regressions/pipelineTest_regression_almasd.py | 24 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/telemetry.py | 12 +- build 02-May-2019 19:43:13 gcwrap/python/scripts/tests/CMakeLists.txt | 1 + build 02-May-2019 19:43:13 .../scripts/tests/test_mstransform_subset.py | 6008 ++++++++++++++++++++ build 02-May-2019 19:43:13 gcwrap/tasks/flagdata.xml | 2650 +++++---- build 02-May-2019 19:43:13 gcwrap/tasks/importasap.xml | 2 +- build 02-May-2019 19:43:13 gcwrap/tasks/tclean.xml | 24 +- build 02-May-2019 19:43:13 gcwrap/tools/CMakeLists.txt | 1 + build 02-May-2019 19:43:13 gcwrap/tools/casaswig_types.cc | 29 + build 02-May-2019 19:43:13 gcwrap/tools/casaswig_types.h | 13 + build 02-May-2019 19:43:13 gcwrap/tools/images/coordsys.xml | 16 +- build 02-May-2019 19:43:13 gcwrap/tools/synthesis/imager.xml | 3 +- build 02-May-2019 19:43:13 gcwrap/tools/synthesis/simulator.xml | 2 +- build 02-May-2019 19:43:13 gcwrap/tools/utils/utils.xml | 10 + build 02-May-2019 19:43:13 gcwrap/tools/utils/utils_cmpt.cc | 13 +- build 02-May-2019 19:43:13 73 files changed, 8883 insertions(+), 1659 deletions(-) build 02-May-2019 19:43:13 create mode 100644 code/casatools/Data/Opt.h build 02-May-2019 19:43:13 create mode 100644 code/casatools/protos/shutdown.proto build 02-May-2019 19:43:13 create mode 100644 code/display/QtViewer/grpcViewerAdaptor.cc build 02-May-2019 19:43:13 create mode 100644 code/display/QtViewer/grpcViewerAdaptor.qo.h build 02-May-2019 19:43:13 create mode 100644 code/display/protos/img.proto build 02-May-2019 19:43:13 create mode 100755 code/install/resolvegitrevision.pl build 02-May-2019 19:43:13 create mode 100644 code/synthesis/MeasurementEquations/test/tPredictComp.cc build 02-May-2019 19:43:13 create mode 100644 gcwrap/python/scripts/tests/test_mstransform_subset.py build 02-May-2019 19:43:13 create mode 100644 gcwrap/tools/casaswig_types.cc build 02-May-2019 19:43:13 build 02-May-2019 19:43:13 edu.nrao.gradle.casa.build.GitRepository@29507933 build 02-May-2019 19:43:13 getLastTag called with build 02-May-2019 19:43:13 branch: ARD-20 build 02-May-2019 19:43:13 env: [bamboo_planRepository_1_branch=ARD-20, PATH=/bin:/usr/lib64/qt-3.3/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin, bamboo_planRepository_2_branch=master, HISTCONTROL=ignoredups, bamboo_repository_revision_number=661dc3b4e421927198db45ccdc85e3f9a420f7b1, bamboo_planRepository_1_branchDisplayName=ARD-20, bamboo_repository_20938876_previous_revision_number=f58f7395569d7d77758ab45e8beeb376e7ec00ae, GUESTFISH_RESTORE=\e[0m, bamboo_repository_20938876_git_username=, WRAPPER_BITS=32, bamboo_buildKey=ARD-BPT16-TBFP, bamboo_repository_34079378_git_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git, 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bamboo_plan_storageTag=plan-33887019, USER=casaci, bamboo_planRepository_2_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa-pkg.git, bamboo_repository_git_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git, bamboo_repository_34079378_name=OPEN-CASA-FULL, bamboo_working_directory=/export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP, HOSTNAME=cbt-el7-4, QTDIR=/usr/lib64/qt-3.3, MODULESHOME=/usr/share/Modules, bamboo_planRepository_1_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git, bamboo_capability_system_jdk_JDK_1_8=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.102-1.b14.el7_2.x86_64, WRAPPER_ARCH=x86, KDEDIRS=/usr, bamboo_repository_20938876_git_repositoryUrl=ssh://git@open-bitbucket.nrao.edu:7999/casa/casa-pkg.git, XDG_RUNTIME_DIR=/run/user/9285, GUESTFISH_OUTPUT=\e[0m, HOME=/users/casaci, QTLIB=/usr/lib64/qt-3.3/lib] build 02-May-2019 19:43:13 sourceDir: /export/home/cbt-el7-4/bamboohome/xml-data/build-dir/ARD-BPT16-TBFP/taggitworkdir/casa build 02-May-2019 19:43:13 Resolving CAS-/feature/bugfix tag build 02-May-2019 19:43:13 Branch parts: [ARD-20] build 02-May-2019 19:43:13 Checking for an existing tag for the branch build 02-May-2019 19:43:13 tagGrep: grep test-ARD-20 build 02-May-2019 19:43:13 java.lang.UNIXProcess@4e075041 | java.lang.UNIXProcess@19da8923 | java.lang.UNIXProcess@7e6b300a | java.lang.UNIXProcess@27e75c49 build 02-May-2019 19:43:13 Checking out ARD-20 error 02-May-2019 19:43:13 Switched to branch 'ARD-20' build 02-May-2019 19:43:13 Your branch is behind 'origin/ARD-20' by 11 commits, and can be fast-forwarded. build 02-May-2019 19:43:13 (use "git pull" to update your local branch) build 02-May-2019 19:43:13 build 02-May-2019 19:43:13 Updating ARD-20 build 02-May-2019 19:43:14 Updating 32072d8..661dc3b build 02-May-2019 19:43:14 Fast-forward build 02-May-2019 19:43:14 code/synthesis/CMakeLists.txt | 3 + build 02-May-2019 19:43:14 code/synthesis/TransformMachines/BeamCalc.cc | 14 + build 02-May-2019 19:43:14 .../VLACalcIlluminationConvFunc.cc | 18 +- build 02-May-2019 19:43:14 code/synthesis/TransformMachines/ZernikeCalc.cc | 444 +++++++++++++++++++++ build 02-May-2019 19:43:14 code/synthesis/TransformMachines/ZernikeCalc.h | 99 +++++ build 02-May-2019 19:43:14 .../TransformMachines/ZernikeCalcParams.cc | 55 +++ build 02-May-2019 19:43:14 code/synthesis/TransformMachines2/AWProjectFT.cc | 2 +- build 02-May-2019 19:43:14 code/synthesis/TransformMachines2/EVLAAperture.cc | 7 +- build 02-May-2019 19:43:14 .../VLACalcIlluminationConvFunc.cc | 64 ++- build 02-May-2019 19:43:14 .../VLACalcIlluminationConvFunc.h | 3 +- build 02-May-2019 19:43:14 10 files changed, 663 insertions(+), 46 deletions(-) build 02-May-2019 19:43:14 create mode 100644 code/synthesis/TransformMachines/ZernikeCalc.cc build 02-May-2019 19:43:14 create mode 100644 code/synthesis/TransformMachines/ZernikeCalc.h build 02-May-2019 19:43:14 create mode 100644 code/synthesis/TransformMachines/ZernikeCalcParams.cc build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 Constructing a new tag based on 5.5.0-132-test-ARD-20-1 build 02-May-2019 19:43:14 Branch: ARD-20 build 02-May-2019 19:43:14 ARD- detected build 02-May-2019 19:43:14 Prefix: 5.5.0-132-test-ARD-20 build 02-May-2019 19:43:14 5.5.0-132-test-ARD-20-2 build 02-May-2019 19:43:14 Last tag: 5.5.0-132-test-ARD-20-1 build 02-May-2019 19:43:14 Branch: ARD-20 build 02-May-2019 19:43:14 Comparing tag to branch with: git diff --exit-code 5.5.0-132-test-ARD-20-1 ARD-20 build 02-May-2019 19:43:14 diff --git a/code/synthesis/CMakeLists.txt b/code/synthesis/CMakeLists.txt build 02-May-2019 19:43:14 index 074987b..3fcfc97 100644 build 02-May-2019 19:43:14 --- a/code/synthesis/CMakeLists.txt build 02-May-2019 19:43:14 +++ b/code/synthesis/CMakeLists.txt build 02-May-2019 19:43:14 @@ -87,6 +87,8 @@ casa_add_library( synthesis build 02-May-2019 19:43:14 # TransformMachines/cDataToGridImpl.cc build 02-May-2019 19:43:14 TransformMachines/BeamCalc.cc build 02-May-2019 19:43:14 TransformMachines/BeamCalcParams.cc build 02-May-2019 19:43:14 + TransformMachines/ZernikeCalc.cc build 02-May-2019 19:43:14 + TransformMachines/ZernikeCalcParams.cc build 02-May-2019 19:43:14 TransformMachines/DBeamSkyJones.cc build 02-May-2019 19:43:14 TransformMachines/FTMachine.cc build 02-May-2019 19:43:14 TransformMachines/GridFT.cc build 02-May-2019 19:43:14 @@ -729,6 +731,7 @@ install (FILES build 02-May-2019 19:43:14 ) build 02-May-2019 19:43:14 install (FILES build 02-May-2019 19:43:14 TransformMachines/BeamCalc.h build 02-May-2019 19:43:14 + TransformMachines/ZernikeCalc.h build 02-May-2019 19:43:14 TransformMachines/BeamSkyJones.h build 02-May-2019 19:43:14 TransformMachines/BeamSquint.h build 02-May-2019 19:43:14 TransformMachines/CFCache.h build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines/BeamCalc.cc b/code/synthesis/TransformMachines/BeamCalc.cc build 02-May-2019 19:43:14 index 88d47dc..6ccacb7 100644 build 02-May-2019 19:43:14 --- a/code/synthesis/TransformMachines/BeamCalc.cc build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines/BeamCalc.cc build 02-May-2019 19:43:14 @@ -238,6 +238,20 @@ namespace casa{ build 02-May-2019 19:43:14 //antRespPath_p = fullFileName + "/data/alma/responses"; build 02-May-2019 19:43:14 antRespPath_p = fullFileName + "/alma/responses"; build 02-May-2019 19:43:14 } build 02-May-2019 19:43:14 + else if(obsName_p=="MeerKAT" && antType_p=="STANDARD"){ build 02-May-2019 19:43:14 + os << LogIO::NORMAL << "Will use default geometries for MeerKAT STANDARD by spoofing EVLA." << LogIO::POST; build 02-May-2019 19:43:14 + BeamCalc_NumBandCodes_p = EVLABeamCalc_NumBandCodes; build 02-May-2019 19:43:14 + BeamCalcGeometries_p.resize(BeamCalc_NumBandCodes_p); build 02-May-2019 19:43:14 + bandMinFreq_p.resize(BeamCalc_NumBandCodes_p); build 02-May-2019 19:43:14 + bandMaxFreq_p.resize(BeamCalc_NumBandCodes_p); build 02-May-2019 19:43:14 + for(uInt i=0; i build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +using namespace std; build 02-May-2019 19:43:14 +using namespace casacore; build 02-May-2019 19:43:14 +namespace casa { build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalc* ZernikeCalc::instance_p = 0; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalc* ZernikeCalc::Instance(){ build 02-May-2019 19:43:14 + if(instance_p==0){ build 02-May-2019 19:43:14 + instance_p = new ZernikeCalc(); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + return instance_p; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::rcoeff(int m, int n, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, int xSize, int ySize, build 02-May-2019 19:43:14 + Vector< Vector > *R) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + // Vector< Vector > rho(xSize, Vector(ySize, 0)); build 02-May-2019 19:43:14 + Vector< Vector > rho(xSize); build 02-May-2019 19:43:14 + for (int ii=0; ii cx) { build 02-May-2019 19:43:14 + // rho[ii][jj] = 0; build 02-May-2019 19:43:14 + // } build 02-May-2019 19:43:14 + // } build 02-May-2019 19:43:14 + // } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + int lim = (int)((n-m)/2) + 1; build 02-May-2019 19:43:14 + double num = 0, den = 0, num2 = 0; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp parallel for schedule(dynamic) build 02-May-2019 19:43:14 + for(int ll = 0; ll < lim; ll++) { build 02-May-2019 19:43:14 + den = boost::math::factorial(ll) * boost::math::factorial(((n+m)/2)-ll) *\ build 02-May-2019 19:43:14 + boost::math::factorial(((n-m)/2)-ll); build 02-May-2019 19:43:14 + num2 = pow(-1.0,(double)ll) * boost::math::factorial(n-ll); // num2 here is to reduce the compute within the i-j loop below build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + for (int ii = 0; ii < xSize; ii++) { build 02-May-2019 19:43:14 + for(int jj = 0; jj < ySize; jj++) { build 02-May-2019 19:43:14 + num = pow(rho[ii][jj], (double)(n-(2*ll))) * num2; build 02-May-2019 19:43:14 + (*R)[ii][jj] += num/den; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::zernikeTerm(Vector *m, Vector *n, Vector *ampR, Vector *ampI, build 02-May-2019 19:43:14 + Vector< Vector > *xCoords, Vector< Vector > *yCoords, int xSize, int ySize, build 02-May-2019 19:43:14 + Vector< Vector > *zTerm) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // Vector< Vector> phi(xSize, Vector (ySize,0)); build 02-May-2019 19:43:14 + Vector< Vector> phi; build 02-May-2019 19:43:14 + phi.resize(xSize); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + for (int ii = 0; ii < xSize; ii++) { build 02-May-2019 19:43:14 + phi[ii].resize(ySize); build 02-May-2019 19:43:14 + for(int jj = 0; jj < ySize; jj++) { build 02-May-2019 19:43:14 + phi[ii][jj] = atan2((*yCoords)[ii][jj], (*xCoords)[ii][jj]); build 02-May-2019 19:43:14 + (*zTerm)[ii][jj] = 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + int NZ=refim::SynthesisUtils::getenv("NZ",144); build 02-May-2019 19:43:14 + // cout << "NZ = " << NZ << endl; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + //int CUTOFF=refim::SynthesisUtils::getenv("CUTOFF",10); build 02-May-2019 19:43:14 + //cout << "CUTOFF = " << CUTOFF << endl; build 02-May-2019 19:43:14 + //float cutoff; build 02-May-2019 19:43:14 + //if (CUTOFF > 10) build 02-May-2019 19:43:14 + // cutoff = CUTOFF/100; build 02-May-2019 19:43:14 + //else build 02-May-2019 19:43:14 + // cutoff = CUTOFF/10.; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + double maxR = 0, maxI = 0; build 02-May-2019 19:43:14 + for (uint tt = 0; tt < NZ; tt++) { build 02-May-2019 19:43:14 + if ((*ampR)[tt] > maxR) build 02-May-2019 19:43:14 + maxR = (*ampR)[tt]; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if ((*ampI)[tt] > maxI) build 02-May-2019 19:43:14 + maxI = (*ampI)[tt]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + for (uint tt = 0; tt < NZ; tt++) { build 02-May-2019 19:43:14 + (*ampR)[tt] /= maxR; build 02-May-2019 19:43:14 + (*ampI)[tt] /= maxI; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + for(uint tt = 0; tt < NZ; tt++) { build 02-May-2019 19:43:14 + //cout << "ampR " << (*ampR)[tt] << " ampI " << (*ampI)[tt] << endl; build 02-May-2019 19:43:14 + // Vector< Vector> R(xSize, Vector (ySize,0)); build 02-May-2019 19:43:14 + // cout << "M value : "<< (*m)[tt] << " n value : " << (*n)[tt] << " tt "<< tt << endl; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Vector> R; build 02-May-2019 19:43:14 + R.resize(xSize); build 02-May-2019 19:43:14 + for (int ii = 0; ii < xSize; ii++){ build 02-May-2019 19:43:14 + R[ii].resize(ySize); build 02-May-2019 19:43:14 + for (int jj =0; jj < ySize; jj++) build 02-May-2019 19:43:14 + R[ii][jj]=0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if (((*n)[tt]-(*m)[tt]) % 2 != 0) build 02-May-2019 19:43:14 + continue; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + int fac = 1; build 02-May-2019 19:43:14 + if ((*n)[tt] % 2 == 0) { build 02-May-2019 19:43:14 + if ((*n)[tt] != 0) { build 02-May-2019 19:43:14 + fac = -1; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + int M; build 02-May-2019 19:43:14 + if ((*m)[tt] < 0) { build 02-May-2019 19:43:14 + M = -(*m)[tt]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + else { build 02-May-2019 19:43:14 + M = (*m)[tt]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + rcoeff(M, (*n)[tt], xCoords, yCoords, xSize, ySize, &R); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + double tmpzern; build 02-May-2019 19:43:14 + int cx, cy; build 02-May-2019 19:43:14 + cx = xSize/2; build 02-May-2019 19:43:14 + cy = ySize/2; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp parallel for schedule(dynamic) build 02-May-2019 19:43:14 + for (int ii = 0; ii < xSize; ii++) { build 02-May-2019 19:43:14 + for(int jj = 0; jj < ySize; jj++) { build 02-May-2019 19:43:14 + if (R[ii][jj] == 0) build 02-May-2019 19:43:14 + continue; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if ((*m)[tt] > 0){ build 02-May-2019 19:43:14 + tmpzern = fac * R[ii][jj] * cos((*m)[tt]*phi[ii][jj]); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + else if ((*m)[tt] < 0){ build 02-May-2019 19:43:14 + tmpzern = fac * R[ii][jj] * sin(-(*m)[tt]*phi[ii][jj]); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + else { build 02-May-2019 19:43:14 + tmpzern = fac * R[ii][jj]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + (*zTerm)[ii][jj] += Complex((*ampR)[tt]*tmpzern, (*ampI)[tt]*tmpzern); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if (sqrt(pow((ii-cx),2)+ pow((jj-cy),2)) > 0.7*cx) { // the 0.7 is an arbitrary scaling fix this build 02-May-2019 19:43:14 + (*zTerm)[ii][jj] = Complex(0,0); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::fillAperture(Vector *ampR, Vector *ampI, build 02-May-2019 19:43:14 + Vector *m, Vector *n, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, const int xSize, const int ySize, build 02-May-2019 19:43:14 + ApertureCalcParams *ap) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + IPosition shape(ap->aperture->shape()); build 02-May-2019 19:43:14 + Array tmpImg(shape); build 02-May-2019 19:43:14 + ap->aperture->get(&tmpImg); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // cout << "ap oversamp " << ap->oversamp << endl; build 02-May-2019 19:43:14 + // cout << "ap dx " << ap->dx << " ap dy " << ap->dy << endl; build 02-May-2019 19:43:14 + // cout << "ap nx " << ap->nx << " ap ny " << ap->ny << endl; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // Timer tim; build 02-May-2019 19:43:14 + // Vector< Vector > zTerm(xSize, Vector(ySize,0)); build 02-May-2019 19:43:14 + Vector< Vector > zTerm; build 02-May-2019 19:43:14 + zTerm.resize(xSize); build 02-May-2019 19:43:14 + for (int ii = 0; iisize() != m->size()) && (m->size() != n->size())) { build 02-May-2019 19:43:14 + throw length_error("amp, m, and n vectors should be identical length"); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // tim.mark(); build 02-May-2019 19:43:14 + zernikeTerm(m, n, ampR, ampI, xCoords, yCoords, xSize, ySize, &zTerm); build 02-May-2019 19:43:14 + // cout << "Time taken to generate zernike surface " << tim.real() << endl; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // tim.mark(); build 02-May-2019 19:43:14 +//#pragma omp parallel for schedule(dynamic) build 02-May-2019 19:43:14 + for(int ii=0; ii < shape(3); ii++) { build 02-May-2019 19:43:14 + for(int ij=0; ij < shape(2); ij++) { build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + for(int ik=(ap->ny-ySize)/2; ik < (ap->ny + ySize)/2; ik++) { build 02-May-2019 19:43:14 +//#pragma omp simd build 02-May-2019 19:43:14 + for(int il=(ap->nx-xSize)/2; il < (ap->nx + xSize)/2; il++) { build 02-May-2019 19:43:14 + int zk = ik - (ap->ny-ySize)/2; build 02-May-2019 19:43:14 + int zl = il - (ap->nx-xSize)/2; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + tmpImg[ii][ij][ik][il] = tmpImg[ii][ij][ik][il] + zTerm[zk][zl]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // cout << "Time taken to fill aperture " << tim.real() << endl; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ap->aperture->put(tmpImg); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::computePixelValuesZ(int nx, int ny, build 02-May-2019 19:43:14 + Vector< Vector > *xCoords, Vector< Vector > *yCoords) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + float dx, dy; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // 2 is the total interval across which the Zernike is defined, build 02-May-2019 19:43:14 + // i.e., from (-1, 1). build 02-May-2019 19:43:14 + dx = 2./nx; build 02-May-2019 19:43:14 + dy = 2./ny; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // This effectively replicates numpy.meshgrid build 02-May-2019 19:43:14 + for(int xx = 0; xx < nx; xx++) { build 02-May-2019 19:43:14 + for(int yy = 0; yy < ny; yy++){ build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + (*xCoords)[xx][yy] = -1 + xx*dx; build 02-May-2019 19:43:14 + (*yCoords)[xx][yy] = -1 + yy*dy; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::calculateApertureZ(ApertureCalcParams *ap, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, const int xSize, const int ySize, FILE *fptr, int inStokes) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + /* Write function to sum individual Zernike surfaces with the build 02-May-2019 19:43:14 + * appropriate amplitudes */ build 02-May-2019 19:43:14 + int size = sizeof(VLA_R0.ampR)/sizeof(VLA_R0.ampR[0]); build 02-May-2019 19:43:14 + Vector ampR(size); build 02-May-2019 19:43:14 + Vector ampI(size); build 02-May-2019 19:43:14 + Vector m(size); build 02-May-2019 19:43:14 + Vector n(size); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + fill(ampR.begin(), ampR.end(), 0); build 02-May-2019 19:43:14 + fill(ampI.begin(), ampI.end(), 0); build 02-May-2019 19:43:14 + fill(m.begin(), m.end(), 0); build 02-May-2019 19:43:14 + fill(n.begin(), n.end(), 0); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if (inStokes == Stokes::RR) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + // The VLA_?? struct has arrays, convert to vectors since rest of the code build 02-May-2019 19:43:14 + // expects vectors. Each vector is small so this is cheap build 02-May-2019 19:43:14 + int size = sizeof(VLA_R0.ampR)/sizeof(VLA_R0.ampR[0]); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp simd build 02-May-2019 19:43:14 + for(int ii = 0; ii < size; ii++) { build 02-May-2019 19:43:14 + ampR[ii] = VLA_R0.ampR[ii]; build 02-May-2019 19:43:14 + ampI[ii] = VLA_R0.ampI[ii]; build 02-May-2019 19:43:14 + m[ii] = VLA_R0.m[ii]; build 02-May-2019 19:43:14 + n[ii] = VLA_R0.n[ii]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + else if (inStokes == Stokes::LL) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + // The VLA_?? struct has arrays, convert to vectors since rest of the code build 02-May-2019 19:43:14 + // expects vectors. Each vector is small so this is cheap build 02-May-2019 19:43:14 + int size = sizeof(VLA_L0.ampR)/sizeof(VLA_L0.ampR[0]); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp simd build 02-May-2019 19:43:14 + for(int ii = 0; ii < size; ii++) { build 02-May-2019 19:43:14 + ampR[ii] = VLA_L0.ampR[ii]; build 02-May-2019 19:43:14 + ampI[ii] = VLA_L0.ampI[ii]; build 02-May-2019 19:43:14 + m[ii] = VLA_L0.m[ii]; build 02-May-2019 19:43:14 + n[ii] = VLA_L0.n[ii]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + if (inStokes == Stokes::XX) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + // The VLA_?? struct has arrays, convert to vectors since rest of the code build 02-May-2019 19:43:14 + // expects vectors. Each vector is small so this is cheap build 02-May-2019 19:43:14 + int size = sizeof(MeerKAT_X0.ampR)/sizeof(MeerKAT_X0.ampR[0]); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp simd build 02-May-2019 19:43:14 + for(int ii = 0; ii < size; ii++) { build 02-May-2019 19:43:14 + ampR[ii] = MeerKAT_X0.ampR[ii]; build 02-May-2019 19:43:14 + ampI[ii] = MeerKAT_X0.ampI[ii]; build 02-May-2019 19:43:14 + m[ii] = MeerKAT_X0.m[ii]; build 02-May-2019 19:43:14 + n[ii] = MeerKAT_X0.n[ii]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + else if (inStokes == Stokes::YY) build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + // The VLA_?? struct has arrays, convert to vectors since rest of the code build 02-May-2019 19:43:14 + // expects vectors. Each vector is small so this is cheap build 02-May-2019 19:43:14 + int size = sizeof(MeerKAT_Y0.ampR)/sizeof(MeerKAT_Y0.ampR[0]); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +//#pragma omp simd build 02-May-2019 19:43:14 + for(int ii = 0; ii < size; ii++) { build 02-May-2019 19:43:14 + ampR[ii] = MeerKAT_Y0.ampR[ii]; build 02-May-2019 19:43:14 + ampI[ii] = MeerKAT_Y0.ampI[ii]; build 02-May-2019 19:43:14 + m[ii] = MeerKAT_Y0.m[ii]; build 02-May-2019 19:43:14 + n[ii] = MeerKAT_Y0.n[ii]; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + fillAperture(&R, &I, &m, &n, xCoords, yCoords, xSize, ySize, ap); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + /* buildApertureZ contructs the aperture image within ApertureCalcParams, build 02-May-2019 19:43:14 + * i.e., ap->aperture. The meat of the computation sits within build 02-May-2019 19:43:14 + * calculateApertureZ, which reads from a text file that contains the Zernike build 02-May-2019 19:43:14 + * powers as a function of frequency and polarization, and fills the build 02-May-2019 19:43:14 + * appropriate plane in ap->aperture build 02-May-2019 19:43:14 + */ build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int ZernikeCalc::buildApertureZ(ApertureCalcParams *ap, int inStokes) { build 02-May-2019 19:43:14 + int nx, ny; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + nx = ap->nx; build 02-May-2019 19:43:14 + ny = ap->ny; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + //ap->oversamp *= ap->oversamp; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // Trim the size of zTerm to be the smallest bounding box around the build 02-May-2019 19:43:14 + // aperture build 02-May-2019 19:43:14 + int xSize = round((nx * ap->dx * ap->oversamp) / VLA_L0.antDia); build 02-May-2019 19:43:14 + int ySize = round((ny * ap->dy * ap->oversamp) / VLA_L0.antDia); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Vector< Vector > xCoords; build 02-May-2019 19:43:14 + Vector< Vector > yCoords; build 02-May-2019 19:43:14 + xCoords.resize(xSize); yCoords.resize(xSize); build 02-May-2019 19:43:14 + for(int i=0;idx /= ap->oversamp; build 02-May-2019 19:43:14 + //ap->dy /= ap->oversamp; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + return 0; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +}; build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines/ZernikeCalc.h b/code/synthesis/TransformMachines/ZernikeCalc.h build 02-May-2019 19:43:14 new file mode 100644 build 02-May-2019 19:43:14 index 0000000..13fccb5 build 02-May-2019 19:43:14 --- /dev/null build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines/ZernikeCalc.h build 02-May-2019 19:43:14 @@ -0,0 +1,99 @@ build 02-May-2019 19:43:14 +//# ZernikeCalc.h: Definition for ZernikeCalc build 02-May-2019 19:43:14 +//# Copyright (C) 1996,1997,1998,1999,2000,2002 build 02-May-2019 19:43:14 +//# Associated Universities, Inc. Washington DC, USA. build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# This library is free software; you can redistribute it and/or modify it build 02-May-2019 19:43:14 +//# under the terms of the GNU Library General Public License as published by build 02-May-2019 19:43:14 +//# the Free Software Foundation; either version 2 of the License, or (at your build 02-May-2019 19:43:14 +//# option) any later version. build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# This library is distributed in the hope that it will be useful, but WITHOUT build 02-May-2019 19:43:14 +//# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or build 02-May-2019 19:43:14 +//# FITNESS FOR A PARTICULAR PURPOSE. See the GNU Library General Public build 02-May-2019 19:43:14 +//# License for more details. build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# You should have received a copy of the GNU Library General Public License build 02-May-2019 19:43:14 +//# along with this library; if not, write to the Free Software Foundation, build 02-May-2019 19:43:14 +//# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA. build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# Correspondence concerning AIPS++ should be adressed as follows: build 02-May-2019 19:43:14 +//# Internet email: aips2-request@nrao.edu. build 02-May-2019 19:43:14 +//# Postal address: AIPS++ Project Office build 02-May-2019 19:43:14 +//# National Radio Astronomy Observatory build 02-May-2019 19:43:14 +//# 520 Edgemont Road build 02-May-2019 19:43:14 +//# Charlottesville, VA 22903-2475 USA build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# build 02-May-2019 19:43:14 +//# $Id$ build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +#ifndef SYNTHESIS_ZERNIKECALC_H build 02-May-2019 19:43:14 +#define SYNTHESIS_ZERNIKECALC_H build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +using namespace std; build 02-May-2019 19:43:14 +using namespace casacore; build 02-May-2019 19:43:14 +namespace casa{ build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // XXX TODO: Convert n, m, ampR, ampI to vectors to be dynamically sized build 02-May-2019 19:43:14 + // given user initialization list build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + typedef struct { build 02-May-2019 19:43:14 + int pol; // polarization enurated type is a temporary fix build 02-May-2019 19:43:14 + int spw; // 0...N build 02-May-2019 19:43:14 + int antType; // Index to distinguish antenna types for hetero array build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + float freq; // In Hz build 02-May-2019 19:43:14 + float antDia; // In metres build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + int n[145]; build 02-May-2019 19:43:14 + int m[145]; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + double ampR[145]; build 02-May-2019 19:43:14 + double ampI[145]; build 02-May-2019 19:43:14 + } ZernikeCalcCoeffs; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + extern ZernikeCalcCoeffs VLA_L0; build 02-May-2019 19:43:14 + extern ZernikeCalcCoeffs VLA_R0; build 02-May-2019 19:43:14 + extern ZernikeCalcCoeffs MeerKAT_X0; build 02-May-2019 19:43:14 + extern ZernikeCalcCoeffs MeerKAT_Y0; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + class ZernikeCalc : public BeamCalc build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + public: build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // This is a SINGLETON class build 02-May-2019 19:43:14 + static ZernikeCalc* Instance(); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ~ZernikeCalc() {} build 02-May-2019 19:43:14 + ZernikeCalc() {} build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + //Int calculateApertureZ(ApertureCalcParams *ap); build 02-May-2019 19:43:14 + Int calculateApertureZ(ApertureCalcParams *ap, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, const int xSize, const int ySize, FILE *fptr, int inStokes); build 02-May-2019 19:43:14 + Int buildApertureZ(ApertureCalcParams *ap, int inStokes); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int fillAperture(Vector *ampR, Vector *ampI, build 02-May-2019 19:43:14 + Vector *m, Vector *n, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, const int xSize, const int ySize, build 02-May-2019 19:43:14 + ApertureCalcParams *ap); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + private: build 02-May-2019 19:43:14 + Int rcoeff(int m, int n, Vector< Vector > *xCoords, build 02-May-2019 19:43:14 + Vector< Vector > *yCoords, int xSize, int ySize, Vector< Vector > *R); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int zernikeTerm(Vector *m, Vector *n, Vector *ampR, Vector *ampI, build 02-May-2019 19:43:14 + Vector< Vector > *xCoords, Vector< Vector > *yCoords, build 02-May-2019 19:43:14 + int xSize, int ySize, Vector< Vector > *zTerm); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + Int computePixelValuesZ(int nx, int ny, Vector< Vector > *xCoords, Vector< Vector > *yCoords); build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + static ZernikeCalc* instance_p; build 02-May-2019 19:43:14 + }; build 02-May-2019 19:43:14 +}; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +#endif build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines/ZernikeCalcParams.cc b/code/synthesis/TransformMachines/ZernikeCalcParams.cc build 02-May-2019 19:43:14 new file mode 100644 build 02-May-2019 19:43:14 index 0000000..4933dd5 build 02-May-2019 19:43:14 --- /dev/null build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines/ZernikeCalcParams.cc build 02-May-2019 19:43:14 @@ -0,0 +1,55 @@ build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +using namespace casacore; build 02-May-2019 19:43:14 +namespace casa{ build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalcCoeffs VLA_R0 = { build 02-May-2019 19:43:14 + 5, // polarization type build 02-May-2019 19:43:14 + 0, // spw build 02-May-2019 19:43:14 + 0, // antType build 02-May-2019 19:43:14 + 1040.0, // freq build 02-May-2019 19:43:14 + 25.0, // ant diam in metres build 02-May-2019 19:43:14 + {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,11,11,11,11,11,11,12,12,12,12,12,12,13,13,13,13,13,13,13,14,14,14,14,14,14,14,15,15,15,15,15,15,15,15,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,11,11,11,11,11,11,12,12,12,12,12,12,13,13,13,13,13,13,13,14,14,14,14,14,14,14,15,15,15,15,15,15,15,15},//n build 02-May-2019 19:43:14 + {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,1,3,2,4,1,3,5,2,4,6,1,3,5,7,2,4,6,8,1,3,5,7,9,2,4,6,8,10,1,3,5,7,9,11,2,4,6,8,10,12,1,3,5,7,9,11,13,2,4,6,8,10,12,14,1,3,5,7,9,11,13,15,-1,-2,-3,-1,-4,-2,-5,-3,-1,-6,-4,-2,-7,-5,-3,-1,-8,-6,-4,-2,-9,-7,-5,-3,-1,-10,-8,-6,-4,-2,-11,-9,-7,-5,-3,-1,-12,-10,-8,-6,-4,-2,-13,-11,-9,-7,-5,-3,-1,-14,-12,-10,-8,-6,-4,-2,-15,-13,-11,-9,-7,-5,-3,-1},//m build 02-May-2019 19:43:14 + {9168.719,1.0,-25335.611,1.0,-47955.077,1.0,-61413.507,1.0,-53959.853,1.0,-36873.614,1.0,-16887.094,1.0,-4597.637,1.0,-208588.805,145723.308,-321270.266,520716.098,169285.228,-1974530.802,-308366.049,502843.071,469852.777,135649.172,-1537120.846,-181560.631,-214427.977,353508.804,329898.43,-493778.928,79774.904,-862671.531,-105897.435,1775283.759,-110504.894,185143.881,172380.769,-260916.761,-250497.031,33918.102,-342075.983,-44603.326,727895.632,47494.237,-40637.614,70167.657,65078.085,-100240.968,-95753.074,109113.96,9790.511,-85435.235,-12553.733,195800.819,13386.622,-308912.554,-9535.697,17482.729,16078.039,-25657.325,-24298.065,28093.289,35372.167,1514.318,-9496.152,-1847.577,25886.975,1998.159,-44473.752,-1237.096,-945.05,2146.31,1920.414,-3369.996,-3087.451,3763.04,4800.499,-3102.324,-159088.476,-46735.784,-438174.124,-244739.38,-205151.714,-54166.577,440683.75,-422804.114,-234234.78,203405.593,-164585.171,-43106.999,424810.119,309834.605,-296885.091,-162118.893,111809.634,118952.191,-97165.914,-25009.395,-234309.877,223833.592,162262.924,-155162.796,-82945.921,-83741.36,49224.863,50257.65,-41651.118,-10361.269,-113055.365,-90044.648,85599.056,61498.508,-58609.113,-30090.973,18841.495,-23861.426,14816.18,14213.247,-12166.932,-2805.627,28195.713,-29161.592,-23045.486,21741.552,15314.465,-14502.38,-6865.227,2516.398,2810.296,-3655.923,2656.768,2101.175,-1966.334,-320.999,3585.811,3816.804,-3923.46,-3022.892,2781.004,1882.437,-1748.778,-602.369},//ampR build 02-May-2019 19:43:14 + {56437.115,1.0,-141707.598,1.0,-164299.001,1.0,-130837.891,1.0,-76530.021,1.0,-32365.021,1.0,-9065.972,1.0,-1470.656,1.0,-1468962.401,-28934.798,-2276131.655,2366729.092,-33561.818,111230.214,-2210897.513,2300036.278,2645999.47,-26743.53,85908.067,43731.93,-1568129.429,1633481.585,1880780.286,-1260962.909,-15645.53,47598.355,25615.953,-55108.164,-832272.096,868939.06,1001908.997,-670138.408,-923057.806,-6620.162,18479.426,10854.317,-21652.167,-11505.697,-322081.716,337337.846,389668.244,-259735.84,-358347.849,174288.896,-1875.151,4440.882,3085.791,-5362.733,-3239.44,12474.291,-83306.959,87828.342,101737.843,-67439.289,-93234.068,45100.863,72715.204,-292.676,426.416,472.552,-558.825,-483.145,1726.751,335.253,-11093.287,11982.555,14010.963,-9128.717,-12775.28,6110.479,9766.003,-2455.867,-1019553.433,-369951.205,-2097171.328,-1578915.628,10155.661,-427707.836,1618009.315,-2038841.967,-1531765.632,320338.386,8052.38,-339580.119,1201062.154,1147528.18,-1448797.291,-1084458.541,-11947.644,185661.536,4682.608,-196888.356,-526513.27,638762.708,609172.926,-771476.935,-574116.565,-53998.232,-5111.362,77424.628,1950.348,-82137.263,-174310.856,-202560.073,247873.4,235672.292,-300013.613,-221052.457,692.431,-14809.635,-1470.356,21425.408,545.714,-22731.367,47268.805,-45251.204,-51935.111,64506.858,60957.698,-78320.969,-56835.56,1333.547,106.288,-2083.493,-235.438,3074.678,81.225,-3240.447,2341.895,6218.428,-6174.399,-6839.211,8799.152,8223.344,-10818.293,-7406.411},//ampI build 02-May-2019 19:43:14 + }; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalcCoeffs VLA_L0 = { build 02-May-2019 19:43:14 + 8, // polarization type build 02-May-2019 19:43:14 + 0, // spw build 02-May-2019 19:43:14 + 0, // antType build 02-May-2019 19:43:14 + 1040.0, // freq build 02-May-2019 19:43:14 + 25.0, // ant diam in metres build 02-May-2019 19:43:14 + {0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,11,11,11,11,11,11,12,12,12,12,12,12,13,13,13,13,13,13,13,14,14,14,14,14,14,14,15,15,15,15,15,15,15,15,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,11,11,11,11,11,11,12,12,12,12,12,12,13,13,13,13,13,13,13,14,14,14,14,14,14,14,15,15,15,15,15,15,15,15},//n build 02-May-2019 19:43:14 + {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,2,1,3,2,4,1,3,5,2,4,6,1,3,5,7,2,4,6,8,1,3,5,7,9,2,4,6,8,10,1,3,5,7,9,11,2,4,6,8,10,12,1,3,5,7,9,11,13,2,4,6,8,10,12,14,1,3,5,7,9,11,13,15,-1,-2,-3,-1,-4,-2,-5,-3,-1,-6,-4,-2,-7,-5,-3,-1,-8,-6,-4,-2,-9,-7,-5,-3,-1,-10,-8,-6,-4,-2,-11,-9,-7,-5,-3,-1,-12,-10,-8,-6,-4,-2,-13,-11,-9,-7,-5,-3,-1,-14,-12,-10,-8,-6,-4,-2,-15,-13,-11,-9,-7,-5,-3,-1},//m build 02-May-2019 19:43:14 + {-19419.913,1.0,46328.781,1.0,34797.757,1.0,4163.47,1.0,-16036.975,1.0,-21116.387,1.0,-12559.134,1.0,-3985.803,1.0,-18624.193,199242.964,-27571.411,280405.299,231536.926,-2113019.797,-24241.83,269098.624,309593.234,185554.06,-1646682.891,-244865.58,-13952.695,187259.647,215870.138,-392844.502,109175.798,-925826.028,-142792.295,1834354.612,-4817.077,96434.372,111552.148,-206528.742,-214025.518,46494.578,-368184.24,-60097.222,752203.608,84102.054,-44.041,35552.275,41375.121,-78718.585,-81598.428,108314.462,13407.544,-92540.244,-16910.092,202371.782,23873.018,-318632.17,893.479,8372.708,9873.427,-19892.392,-20625.431,27876.137,31389.798,2092.884,-10468.101,-2462.812,26755.786,3632.417,-45876.683,-2343.89,460.411,860.724,1068.157,-2521.585,-2604.398,3734.975,4250.095,-3425.887,-127728.854,-412805.795,-453712.874,-196433.87,228665.74,-478273.878,412014.331,-438320.177,-187816.77,443085.079,183254.063,-381040.055,451719.92,289149.207,-308356.031,-129679.256,-105931.911,258639.215,107921.143,-222055.6,-232446.169,238436.664,150971.955,-161618.556,-66045.872,-98757.426,-45563.12,109010.635,46127.205,-93303.83,-111021.88,-89002.946,91452.842,56934.825,-61316.309,-23700.468,-3239.435,-27848.179,-13242.273,30685.204,13317.387,-26119.676,32041.108,-28647.903,-22647.921,23346.959,14040.603,-15287.707,-5251.902,2410.998,-488.609,-4158.354,-2169.255,4546.18,2128.013,-3774.272,3349.355,4354.307,-3860.908,-2911.556,3037.724,1673.308,-1882.624,-381.384},//ampR build 02-May-2019 19:43:14 + {33407.458,1.0,-83962.438,1.0,-97514.193,1.0,-77801.031,1.0,-45764.598,1.0,-19512.646,1.0,-5512.008,1.0,-964.502,1.0,-852157.587,-5882.282,-1320092.691,1441090.596,-7006.421,-14001.233,-1280914.086,1400205.357,1591241.254,-5801.414,-13659.67,1987.725,-907476.266,994122.101,1129912.742,-720779.68,-3611.964,-10253.34,1122.496,-7101.958,-480847.159,528689.822,600971.625,-382790.171,-596277.412,-1642.883,-5728.432,446.247,-1557.104,217.875,-185441.017,205196.589,233186.452,-148240.898,-230630.671,85371.99,-522.175,-2286.341,118.227,226.159,58.79,8585.256,-47782.06,53405.222,60615.598,-38431.213,-59659.519,21995.585,53190.269,-101.064,-537.374,19.185,247.666,9.984,1168.077,99.122,-6305.635,7335.256,8287.961,-5212.101,-8057.134,2959.085,7110.635,-189.396,-1067048.973,-304748.738,-2155601.72,-1652489.934,-38777.711,-352392.848,1791222.658,-2096116.843,-1603433.0,253159.614,-30986.206,-279900.219,1174976.795,1271395.568,-1490024.625,-1135393.451,26870.284,146674.466,-18134.827,-162392.89,-606090.321,625241.748,675755.429,-793861.799,-601204.216,-39828.274,11388.63,61138.262,-7686.65,-67809.31,-153582.236,-233820.787,242839.033,261903.119,-308983.662,-231604.013,-1774.952,-10853.909,3238.99,16907.676,-2182.659,-18811.648,54713.009,-39816.456,-60219.64,63283.617,67956.637,-80776.37,-59588.28,1060.408,-264.451,-1503.493,492.566,2427.112,-326.611,-2698.774,1711.725,7258.298,-5413.729,-8027.113,8664.237,9226.502,-11196.383,-7761.82},//ampI build 02-May-2019 19:43:14 + }; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalcCoeffs MeerKAT_X0 = { build 02-May-2019 19:43:14 + 9, // polarization type build 02-May-2019 19:43:14 + 0, // spw build 02-May-2019 19:43:14 + 0, // antType build 02-May-2019 19:43:14 + 1040.0, // freq build 02-May-2019 19:43:14 + 13.5, // ant diam in metres build 02-May-2019 19:43:14 + {0,2,4,6,8,10,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10},//n build 02-May-2019 19:43:14 + {0,0,0,0,0,0,1,2,1,3,2,4,1,3,5,2,4,6,1,3,5,7,2,4,6,8,1,3,5,7,9,2,4,6,8,10,-1,-2,-3,-1,-4,-2,-5,-3,-1,-6,-4,-2,-7,-5,-3,-1,-8,-6,-4,-2,-9,-7,-5,-3,-1,-10,-8,-6,-4,-2},//m build 02-May-2019 19:43:14 + {38.169,-75.784,-100.558,-73.727,-33.132,-7.409,-278.996,-29.301,-382.136,55.454,-35.351,-374.224,-291.113,48.315,-39.873,-26.987,-239.986,198.9,-132.401,26.26,-17.655,-29.698,-12.8,-95.423,76.81,-16.888,-29.119,7.144,-3.865,-6.1,-20.722,-3.633,-18.702,14.489,-2.947,-1.183,-88.09,-157.606,65.583,-118.109,-42.431,-153.118,-66.991,48.185,-88.097,-9.691,-26.954,-89.29,-2.926,-30.122,21.237,-39.089,-7.046,-5.334,-10.904,-30.35,-0.277,-0.526,-6.742,4.579,-8.146,-0.659,-1.388,-1.57,-2.314,-4.513},//ampR build 02-May-2019 19:43:14 + {121.188,-280.662,-271.256,-158.553,-52.989,-7.139,-199.483,78.384,-257.766,221.039,80.212,-30.728,-176.966,158.091,132.004,52.043,-13.366,70.616,-67.163,65.756,57.561,-36.735,21.577,-1.78,24.03,-50.967,-10.245,12.97,12.16,-6.983,-2.889,5.203,0.477,3.399,-8.771,-12.423,-60.001,82.234,2.346,-80.536,-9.319,84.902,-8.946,0.488,-58.114,-19.138,-5.958,54.804,-4.147,-2.844,-0.81,-25.207,21.319,-7.231,-2.205,22.068,-0.938,-1.133,-0.237,-0.543,-5.196,-5.678,4.154,-1.38,-0.272,4.43},//ampI build 02-May-2019 19:43:14 + }; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + ZernikeCalcCoeffs MeerKAT_Y0 = { build 02-May-2019 19:43:14 + 12, // polarization type build 02-May-2019 19:43:14 + 0, // spw build 02-May-2019 19:43:14 + 0, // antType build 02-May-2019 19:43:14 + 1040.0, // freq build 02-May-2019 19:43:14 + 13.5, // ant diam in metres build 02-May-2019 19:43:14 + {0,2,4,6,8,10,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10,1,2,3,3,4,4,5,5,5,6,6,6,7,7,7,7,8,8,8,8,9,9,9,9,9,10,10,10,10,10},//n build 02-May-2019 19:43:14 + {0,0,0,0,0,0,1,2,1,3,2,4,1,3,5,2,4,6,1,3,5,7,2,4,6,8,1,3,5,7,9,2,4,6,8,10,-1,-2,-3,-1,-4,-2,-5,-3,-1,-6,-4,-2,-7,-5,-3,-1,-8,-6,-4,-2,-9,-7,-5,-3,-1,-10,-8,-6,-4,-2},//m build 02-May-2019 19:43:14 + {64.57,-137.479,-161.763,-110.863,-46.69,-9.555,-200.739,183.585,-276.985,32.241,182.964,-349.462,-211.98,30.761,-14.212,113.431,-227.098,132.064,-96.456,18.22,-4.053,-24.854,43.852,-91.631,48.745,-42.117,-20.925,5.403,-0.053,-4.807,-12.137,8.973,-18.096,8.589,-8.318,-0.089,-12.192,-129.501,-0.522,-16.65,-38.633,-129.611,-33.091,-2.185,-12.474,13.501,-24.297,-79.976,-12.138,-13.571,-2.445,-5.436,-11.891,3.964,-9.44,-30.306,2.18,-2.832,-2.599,-1.139,-1.127,-5.003,-2.5,0.369,-1.814,-5.774},//ampR build 02-May-2019 19:43:14 + {145.334,-336.6,-325.886,-190.566,-63.692,-8.48,-232.652,-353.512,-303.731,247.604,-360.915,-79.526,-214.619,175.604,125.28,-231.22,-42.139,-114.952,-86.01,71.68,53.826,-11.241,-92.68,-11.571,-45.341,-54.971,-15.259,13.368,10.983,-0.942,4.329,-19.038,-0.776,-9.05,-9.421,-7.917,-26.885,155.86,19.249,-36.008,-17.841,157.794,-26.212,14.326,-26.811,17.038,-12.582,99.112,13.841,-10.549,6.302,-11.862,39.099,5.706,-5.687,38.4,-0.31,2.84,-1.834,1.378,-2.541,-3.568,7.476,0.87,-1.196,7.252},//ampI build 02-May-2019 19:43:14 + }; build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 +}; build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines2/AWProjectFT.cc b/code/synthesis/TransformMachines2/AWProjectFT.cc build 02-May-2019 19:43:14 index 4f2228c..ef9c575 100644 build 02-May-2019 19:43:14 --- a/code/synthesis/TransformMachines2/AWProjectFT.cc build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines2/AWProjectFT.cc build 02-May-2019 19:43:14 @@ -118,7 +118,7 @@ namespace casa { //# NAMESPACE CASA - BEGIN build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 // ROMSObservationColumns msoc(ms.observation()); build 02-May-2019 19:43:14 // String ObsName=msoc.telescopeName()(0); build 02-May-2019 19:43:14 - if ((telescopeName == "EVLA") || (telescopeName == "VLA")) build 02-May-2019 19:43:14 + if ((telescopeName == "EVLA") || (telescopeName == "VLA") || (telescopeName == "MeerKAT")) build 02-May-2019 19:43:14 return new EVLAAperture(); build 02-May-2019 19:43:14 else build 02-May-2019 19:43:14 { build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines2/EVLAAperture.cc b/code/synthesis/TransformMachines2/EVLAAperture.cc build 02-May-2019 19:43:14 index e35d8a6..08e51b4 100644 build 02-May-2019 19:43:14 --- a/code/synthesis/TransformMachines2/EVLAAperture.cc build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines2/EVLAAperture.cc build 02-May-2019 19:43:14 @@ -90,6 +90,11 @@ namespace casa{ build 02-May-2019 19:43:14 else if ((refFreq >=26.5E9) && (refFreq <=40.8E9)) return BeamCalc_EVLA_A; build 02-May-2019 19:43:14 else if ((refFreq >=40.0E9) && (refFreq <=50.0E9)) return BeamCalc_EVLA_Q; build 02-May-2019 19:43:14 } build 02-May-2019 19:43:14 + else build 02-May-2019 19:43:14 + if (telescopeName == "MeerKAT") build 02-May-2019 19:43:14 + { build 02-May-2019 19:43:14 + if ((refFreq >= 0.9E9) && (refFreq <= 2.1E9)) return BeamCalc_EVLA_L; build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 ostringstream mesg; build 02-May-2019 19:43:14 log_l << telescopeName << "/" << refFreq << "(Hz) combination not recognized." << LogIO::EXCEPTION; build 02-May-2019 19:43:14 return -1; build 02-May-2019 19:43:14 @@ -108,7 +113,7 @@ namespace casa{ build 02-May-2019 19:43:14 .observation().telescopeName().getColumn(); build 02-May-2019 19:43:14 for(uInt nt=0;ntshape()); build 02-May-2019 19:43:14 apertureShape(0) = ap.nx; apertureShape(1) = ap.ny; build 02-May-2019 19:43:14 ap.aperture->resize(apertureShape); build 02-May-2019 19:43:14 ap.aperture->set(0.0); build 02-May-2019 19:43:14 - //BeamCalc::Instance()->calculateAperture(&ap,inStokes); build 02-May-2019 19:43:14 - //cerr << ap.aperture->shape() << " " << inStokes << endl; build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 - // If full-pol. imaging, compute all 4 pols., else only the one given by inStokes. build 02-May-2019 19:43:14 - BeamCalc::Instance()->calculateAperture(&ap);// The call in the absence of instokes allows the computation of all build 02-May-2019 19:43:14 - //BeamCalc::Instance()->calculateAperture(&ap,inStokes);// The call in the absence of instokes allows the computation of all build 02-May-2019 19:43:14 - // the four jones parameters at one time. build 02-May-2019 19:43:14 -} build 02-May-2019 19:43:14 + ZernikeCalc::Instance()->buildApertureZ(&ap, inStokes); build 02-May-2019 19:43:14 + } build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 //-------------------------------------------------------------------------- build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 @@ -399,21 +394,22 @@ namespace casa{ build 02-May-2019 19:43:14 uvCoords.replaceCoordinate(spectralCoord,index); build 02-May-2019 19:43:14 //logIO << "The Stokes coordinate is", poln(0)<< LogIO::POST; build 02-May-2019 19:43:14 ap.aperture->setCoordinateInfo(uvCoords); build 02-May-2019 19:43:14 - if (doSquint==true) build 02-May-2019 19:43:14 - { build 02-May-2019 19:43:14 + // if (doSquint==true) build 02-May-2019 19:43:14 + //{ build 02-May-2019 19:43:14 // String name("aperture.im"); build 02-May-2019 19:43:14 // storeImg(name,*(ap.aperture)); build 02-May-2019 19:43:14 - } build 02-May-2019 19:43:14 + //} build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 // Now FT the re-gridded Fourier plane to get the primary beam. build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 - ftAperture(*(ap.aperture),muellerTerm); build 02-May-2019 19:43:14 - if (doSquint==true) build 02-May-2019 19:43:14 - { build 02-May-2019 19:43:14 + ftAperture(*(ap.aperture),muellerTerm); // Do not comment this line out kills mueller production build 02-May-2019 19:43:14 + build 02-May-2019 19:43:14 + // if (doSquint==true) build 02-May-2019 19:43:14 + //{ build 02-May-2019 19:43:14 // String name("ftaperture.im"); build 02-May-2019 19:43:14 // storeImg(name,*(ap.aperture)); build 02-May-2019 19:43:14 - } build 02-May-2019 19:43:14 + //} build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 } build 02-May-2019 19:43:14 void VLACalcIlluminationConvFunc::regridAperture(CoordinateSystem& skyCS, build 02-May-2019 19:43:14 @@ -705,10 +701,10 @@ namespace casa{ build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 // Make SkyJones build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 - // { build 02-May-2019 19:43:14 - //String name("uvgrid.im"); build 02-May-2019 19:43:14 - //storeImg(name,uvgrid); build 02-May-2019 19:43:14 - // } build 02-May-2019 19:43:14 + //{ build 02-May-2019 19:43:14 + // String name("uvgrid.im"); build 02-May-2019 19:43:14 + // storeImg(name,uvgrid); build 02-May-2019 19:43:14 + //} build 02-May-2019 19:43:14 LatticeFFT::cfft2d(uvgrid); build 02-May-2019 19:43:14 // { build 02-May-2019 19:43:14 // Int index = uvgrid.coordinates().findCoordinate(Coordinate::STOKES); build 02-May-2019 19:43:14 @@ -719,10 +715,10 @@ namespace casa{ build 02-May-2019 19:43:14 //tt << name << "_"<< inStokes; build 02-May-2019 19:43:14 //storeImg(String(tt),uvgrid); build 02-May-2019 19:43:14 // } build 02-May-2019 19:43:14 - // { build 02-May-2019 19:43:14 - //String name("ftuvgrid.im"); build 02-May-2019 19:43:14 - //storeImg(name,uvgrid); build 02-May-2019 19:43:14 - // } build 02-May-2019 19:43:14 + //{ build 02-May-2019 19:43:14 + // String name("ftuvgrid.im"); build 02-May-2019 19:43:14 + // storeImg(name,uvgrid); build 02-May-2019 19:43:14 + //} build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 // Now make SkyMuller build 02-May-2019 19:43:14 // build 02-May-2019 19:43:14 @@ -798,7 +794,7 @@ namespace casa{ build 02-May-2019 19:43:14 // } build 02-May-2019 19:43:14 //{ build 02-May-2019 19:43:14 //skyJones.put(buf); build 02-May-2019 19:43:14 - // ostringstream tt; build 02-May-2019 19:43:14 + //ostringstream tt; build 02-May-2019 19:43:14 //String name("skyjones.im"); build 02-May-2019 19:43:14 //tt << name << "_" << inStokes; build 02-May-2019 19:43:14 //storeImg(tt.string(),skyJones); build 02-May-2019 19:43:14 @@ -853,12 +849,12 @@ namespace casa{ build 02-May-2019 19:43:14 IPosition t(4,0,0,0,0),n0(4,0,0,0,0),n1(4,0,0,0,0); build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 skyJones.put(buf); build 02-May-2019 19:43:14 -// ostringstream tt; build 02-May-2019 19:43:14 -// String name("skyjones.im"); build 02-May-2019 19:43:14 -// tt << name << "_"<< inStokes; build 02-May-2019 19:43:14 -// storeImg(String(tt),skyJones); build 02-May-2019 19:43:14 -// skyJones.put(buf); build 02-May-2019 19:43:14 -// cout<<"Finished writing the initial sky jones \n"; build 02-May-2019 19:43:14 +// ostringstream tt; build 02-May-2019 19:43:14 +// String name("skyjones.im"); build 02-May-2019 19:43:14 +// tt << name << "_"<< inStokes; build 02-May-2019 19:43:14 +// storeImg(String(tt),skyJones); build 02-May-2019 19:43:14 +// // skyJones.put(buf); build 02-May-2019 19:43:14 +// cout<<"Finished writing the initial sky jones \n"; build 02-May-2019 19:43:14 // exit(0); build 02-May-2019 19:43:14 // skyMuller(buf,shape, inStokes); build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 @@ -888,16 +884,16 @@ namespace casa{ build 02-May-2019 19:43:14 tmp(t)=conj(tmp(t)/sqrt(Normalizesq)); build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 // cout<<"The Jones Matrix has been normalized using:"<< sqrt(Normalizesq)<<"\n"; build 02-May-2019 19:43:14 - skyJones.put(tmp); build 02-May-2019 19:43:14 + // skyJones.put(tmp); build 02-May-2019 19:43:14 // ostringstream tt1; build 02-May-2019 19:43:14 // String name1("skyjones_normalized_conj.im"); build 02-May-2019 19:43:14 // tt1 << name1 << "_"<< inStokes; build 02-May-2019 19:43:14 // storeImg(String(tt1),skyJones); build 02-May-2019 19:43:14 - // // exit(0); build 02-May-2019 19:43:14 - // // skyJones.put(tmp); build 02-May-2019 19:43:14 + // exit(0); build 02-May-2019 19:43:14 + // skyJones.put(tmp); build 02-May-2019 19:43:14 // cout<<"Finished writing the normalized conjugate sky jones \n"; build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 -// cout<<"Begining the compute of Mueller Matrix term images \n"; build 02-May-2019 19:43:14 + // cout<<"Begining the compute of Mueller Matrix term images \n"; build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 IPosition sliceStart0(4,0,0,0,0),sliceStart1(4,0,0,0,1),sliceLength0(4,shape(0),shape(1),1,1),sliceLength1(4,shape(0),shape(1),1,1); build 02-May-2019 19:43:14 IPosition sliceStart2(4,0,0,0,2),sliceStart3(4,0,0,0,3),sliceLength2(4,shape(0),shape(1),1,1),sliceLength3(4,shape(0),shape(1),1,1); build 02-May-2019 19:43:14 diff --git a/code/synthesis/TransformMachines2/VLACalcIlluminationConvFunc.h b/code/synthesis/TransformMachines2/VLACalcIlluminationConvFunc.h build 02-May-2019 19:43:14 index 3504e40..db23208 100644 build 02-May-2019 19:43:14 --- a/code/synthesis/TransformMachines2/VLACalcIlluminationConvFunc.h build 02-May-2019 19:43:14 +++ b/code/synthesis/TransformMachines2/VLACalcIlluminationConvFunc.h build 02-May-2019 19:43:14 @@ -31,7 +31,8 @@ build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 #include build 02-May-2019 19:43:14 //#include build 02-May-2019 19:43:14 -#include build 02-May-2019 19:43:14 +//#include build 02-May-2019 19:43:14 +#include build 02-May-2019 19:43:14 //#include build 02-May-2019 19:43:14 #include build 02-May-2019 19:43:14 #include build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 Comparison returned: 1 build 02-May-2019 19:43:14 Checkout: git checkout ARD-20 error 02-May-2019 19:43:14 Already on 'ARD-20' build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 [git, tag, -a, 5.5.0-132-test-ARD-20-2, -m 'Automatic tag'] build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 Done tagging 5.5.0-132-test-ARD-20-2 build 02-May-2019 19:43:14 Pushing 5.5.0-132-test-ARD-20-2 to origin error 02-May-2019 19:43:14 To ssh://git@open-bitbucket.nrao.edu:7999/casa/casa.git error 02-May-2019 19:43:14 * [new tag] 5.5.0-132-test-ARD-20-2 -> 5.5.0-132-test-ARD-20-2 build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 Pushed 5.5.0-132-test-ARD-20-2 to origin build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 BUILD SUCCESSFUL build 02-May-2019 19:43:14 build 02-May-2019 19:43:14 Total time: 5.989 secs simple 02-May-2019 19:43:15 Finished task 'Script' with result: Success simple 02-May-2019 19:43:15 Running post build plugin 'Docker Container Cleanup' simple 02-May-2019 19:43:15 Running post build plugin 'NCover Results Collector' simple 02-May-2019 19:43:15 Running post build plugin 'Clover Results Collector' simple 02-May-2019 19:43:15 Running post build plugin 'npm Cache Cleanup' simple 02-May-2019 19:43:15 Running post build plugin 'Artifact Copier' simple 02-May-2019 19:43:15 Finalising the build... simple 02-May-2019 19:43:15 Stopping timer. simple 02-May-2019 19:43:15 Build ARD-BPT16-TBFP-2 completed. simple 02-May-2019 19:43:15 Running on server: post build plugin 'NCover Results Collector' simple 02-May-2019 19:43:15 Running on server: post build plugin 'Build Hanging Detection Configuration' simple 02-May-2019 19:43:15 Running on server: post build plugin 'Clover Delta Calculator' simple 02-May-2019 19:43:15 Running on server: post build plugin 'Maven Dependencies Postprocessor' simple 02-May-2019 19:43:15 All post build plugins have finished simple 02-May-2019 19:43:15 Generating build results summary... simple 02-May-2019 19:43:15 Saving build results to disk... simple 02-May-2019 19:43:15 Logging substituted variables... simple 02-May-2019 19:43:15 Indexing build results... simple 02-May-2019 19:43:15 Finished building ARD-BPT16-TBFP-2.