Coverage for /wheeldirectory/casa-6.7.0-12-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__casac__/spectralline.py: 56%
112 statements
« prev ^ index » next coverage.py v7.6.4, created at 2024-11-01 07:19 +0000
1# This file was automatically generated by SWIG (http://www.swig.org).
2# Version 3.0.12
3#
4# Do not make changes to this file unless you know what you are doing--modify
5# the SWIG interface file instead.
7from sys import version_info as _swig_python_version_info
8if _swig_python_version_info >= (2, 7, 0):
9 def swig_import_helper():
10 import importlib
11 pkg = __name__.rpartition('.')[0]
12 mname = '.'.join((pkg, '_spectralline')).lstrip('.')
13 try:
14 return importlib.import_module(mname)
15 except ImportError:
16 return importlib.import_module('_spectralline')
17 _spectralline = swig_import_helper()
18 del swig_import_helper
19elif _swig_python_version_info >= (2, 6, 0):
20 def swig_import_helper():
21 from os.path import dirname
22 import imp
23 fp = None
24 try:
25 fp, pathname, description = imp.find_module('_spectralline', [dirname(__file__)])
26 except ImportError:
27 import _spectralline
28 return _spectralline
29 try:
30 _mod = imp.load_module('_spectralline', fp, pathname, description)
31 finally:
32 if fp is not None:
33 fp.close()
34 return _mod
35 _spectralline = swig_import_helper()
36 del swig_import_helper
37else:
38 import _spectralline
39del _swig_python_version_info
41try:
42 _swig_property = property
43except NameError:
44 pass # Python < 2.2 doesn't have 'property'.
46try:
47 import builtins as __builtin__
48except ImportError:
49 import __builtin__
51def _swig_setattr_nondynamic(self, class_type, name, value, static=1):
52 if (name == "thisown"):
53 return self.this.own(value)
54 if (name == "this"):
55 if type(value).__name__ == 'SwigPyObject':
56 self.__dict__[name] = value
57 return
58 method = class_type.__swig_setmethods__.get(name, None)
59 if method:
60 return method(self, value)
61 if (not static):
62 if _newclass:
63 object.__setattr__(self, name, value)
64 else:
65 self.__dict__[name] = value
66 else:
67 raise AttributeError("You cannot add attributes to %s" % self)
70def _swig_setattr(self, class_type, name, value):
71 return _swig_setattr_nondynamic(self, class_type, name, value, 0)
74def _swig_getattr(self, class_type, name):
75 if (name == "thisown"):
76 return self.this.own()
77 method = class_type.__swig_getmethods__.get(name, None)
78 if method:
79 return method(self)
80 raise AttributeError("'%s' object has no attribute '%s'" % (class_type.__name__, name))
83def _swig_repr(self):
84 try:
85 strthis = "proxy of " + self.this.__repr__()
86 except __builtin__.Exception:
87 strthis = ""
88 return "<%s.%s; %s >" % (self.__class__.__module__, self.__class__.__name__, strthis,)
90try:
91 _object = object
92 _newclass = 1
93except __builtin__.Exception:
94 class _object:
95 pass
96 _newclass = 0
98class spectralline(_object):
99 """Proxy of C++ casac::spectralline class."""
101 __swig_setmethods__ = {}
102 __setattr__ = lambda self, name, value: _swig_setattr(self, spectralline, name, value)
103 __swig_getmethods__ = {}
104 __getattr__ = lambda self, name: _swig_getattr(self, spectralline, name)
105 __repr__ = _swig_repr
107 def __init__(self):
108 """__init__(self) -> spectralline"""
109 this = _spectralline.new_spectralline()
110 try:
111 self.this.append(this)
112 except __builtin__.Exception:
113 self.this = this
115 def splattotable(self, *args, **kwargs):
116 """
117 splattotable(self, _filenames, _table) -> spectralline
121 Summary:
122 Convert a downloaded Splatalogue spectral line list to a casa table.
124 Description:
127 This method reads a spectral line list(s) downloaded from Splatalogue (www.splatalogue.net) and loads it into a CASA table which
128 can be queried via eg this tool's search function.
130 REQUIRMENTS OF THE DOWNLOADED FILES
132 The downloaded files must be in a specific format for this method to succeed. The columns are the
133 important things; one can filter the results as one desires using Splatalogue, but the particular columns must be present as described
134 below. The columns which must be present in the downloaded file in this exact order are: 'Species', 'NRAO Recommended', 'Chemical Name',
135 'Freq in GHz', 'Resolved QNs', 'CDMS/JPL Intensity', 'Sij^2; (D2)',
136 'Log10 (Aij)', 'EL (K)', 'EU (K)', 'Linelist'. In order to get these columns in this order, one should
137 select exactly the following items on the Splatalogue search interface. Under 'Specify Ranges' one should select 'GHz' for the frequency unit.
138 Under 'Line Strength Display' select exactly 'CDMS/JPL Intensity',
139 'Sij u2', and 'Aij'. Under 'Energy Levels', one should select exactly 'Elower (K)' and 'Eupper (K)'. Under 'Miscellaneous', one should
140 select exactly 'Display Ordered Frequency ONLY' and 'Display NRAO Recommended Frequencies'. One should then initiate the search and on
141 the resulting page, one should select the Tab Field Separator and then export the list. The resulting list should be in the proper
142 format for importing into CASA.
144 RETURN VALUE
145 This method returns an open spectralline tool which references the new table. The new table can also be opened by
146 a spectralline tool using the open method (eg sl.open(tablename)).
149 Input Parameters:
150 filenames Files containing Splatalogue dumps
151 table Output table name.
153 Example:
155 newsl = sl.splattotable('mysplatlist.txt', 'mynewsl.tbl')
156 # search the new spectral line tool
157 newsl.search([0,1000])
159 --------------------------------------------------------------------------------
161 """
162 return _spectralline.spectralline_splattotable(self, *args, **kwargs)
165 def open(self, *args, **kwargs):
166 """
167 open(self, _table) -> bool
171 Summary:
172 Open a spectralline tool using the specified table.
174 Description:
177 This method opens a CASA Splatalogue spectral line table. The table should have been created with
178 splattotable(), search(), or any other sl method which creates a new CASA spectral line table. If no
179 table name is supplied, the default CASA spectral line table included in the system will be opened. The
180 opened tool can then be used to query the table via eg the sl.search() method. This method returns true
181 if the table was successfully opened.
184 Input Parameters:
185 table CASA table containing Splatalogue data.
187 Example:
189 # open user created spectral line table
190 isopen = sl.open('mysplat.tbl')
191 if (isopen)
192 sl.search([0,1000])
194 # open system default spectral line table
195 isopen = sl.open()
196 if (isopen)
197 sl.search([0,1000])
199 --------------------------------------------------------------------------------
201 """
202 return _spectralline.spectralline_open(self, *args, **kwargs)
205 def close(self):
206 """
207 close(self) -> bool
211 Summary:
212 close the spectralline tool
214 Description:
217 The associated table is closed inside casapy and
218 is no longer available for use.
221 Example:
223 sl.close()
225 --------------------------------------------------------------------------------
227 """
228 return _spectralline.spectralline_close(self)
231 def done(self):
232 """
233 done(self) -> bool
237 Summary:
238 End the spectralline tool
240 Description:
243 Effectively a synonym for function close.
246 Example:
248 sl.done()
250 --------------------------------------------------------------------------------
252 """
253 return _spectralline.spectralline_done(self)
256 def search(self, *args, **kwargs):
257 """
258 search(self, _outfile, _freqrange, _species, _reconly, _chemnames, _qns, _intensity, _smu2, _loga, _el, _eu, _rrlinclude, _rrlonly, _verbose, _logfile, _append) -> spectralline
262 Summary:
263 Search a Splatalogue table that has been converted to a casa table
265 Description:
268 Search the table associated with this tool. The return value is a spectralline tool with a new table containing the search
269 results. This new table can be written to disk by specifying its name in the outfile parameter. If outfile is not specified
270 (ie outfile=''), the resulting table is held in memory and deleted upon a call to close() or done() for the newly created tool
271 or upon exiting casapy. Because Splatalogue does not have values for intensity, smu2, loga, el, and eu
272 for radio recombination lines (rrls), one must specify to include rrls in the specified frequency range in the output. In this case,
273 RRLs will be included ignoring any filters on intensity, smu2, loga, el, and eu. One can also specify to list only RRLs. One can specify
274 to list the search results to the logger via the verbose parameter. If verbose is false, no logger output is listed, although the results
275 can be listed later by running the list() method on the newly created spectral line tool. If verbose=true, one can also specify that
276 the results be listed to a logfile and if this file already exists, one can specify that the results be appended to it or to overwrite
277 it with the results.
280 Input Parameters:
281 outfile Results table name. Blank means do not write the table to disk.
282 freqrange Frequency range in GHz.
283 species Species to search for.
284 reconly List only NRAO recommended frequencies.
285 chemnames Chemical names to search for.
286 qns Resolved quantum numbers to search for.
287 intensity CDMS/JPL intensity range. -1 -& do not use an intensity range.
288 smu2 S*mu*mu range in Debye**2. -1 -& do not use an S*mu*mu range.
289 loga log(A) (Einstein coefficient) range. -1 -& do not use a loga range.
290 el Lower energy state range in Kelvin. -1 -& do not use an el range.
291 eu Upper energy state range in Kelvin. -1 -& do not use an eu range.
292 rrlinclude Include RRLs in the result set?
293 rrlonly Include only RRLs in the result set?
294 verbose List result set to logger (and optionally logfile)?
295 logfile List result set to this logfile (only used if verbose=true).
296 append If true, append to logfile if it already exists, if false overwrite logfile it it exists. Only used if verbose=true and logfile not blank.
298 Example:
300 sl.open('myspectrallines.tbl')
301 # do a search postponing listing the results to the logger.
302 slrestool = sl.search(outfile='myresults.tbl', freqrange = [200,300], species=['HOCN', 'HOCO+'])
303 # now list the results
304 slrestool.list()
305 # or one could also do the following after exiting and restarting casapy
306 sl.open('myresults.tbl')
307 sl.list()
309 --------------------------------------------------------------------------------
311 """
312 return _spectralline.spectralline_search(self, *args, **kwargs)
315 def list(self):
316 """
317 list(self)
321 Summary:
322 List the spectral lines in the associated table to the logger.
324 Description:
327 List the spectral lines in the associated table to the logger. Note that listing tables containing more than 10,000 spectral lines can take quite a bit of time.
330 --------------------------------------------------------------------------------
332 """
333 return _spectralline.spectralline_list(self)
336 def torecord(self):
337 """
338 torecord(self) -> record *
342 Summary:
343 Return data on the spectral lines in the table as a record.
345 Description:
348 Return data on the spectral lines in the table as a record.
351 --------------------------------------------------------------------------------
353 """
354 return _spectralline.spectralline_torecord(self)
357 def species(self, *args, **kwargs):
358 """
359 species(self, _verbose, _logfile, _append) -> record *
363 Summary:
364 List the unique species in the associated table to the logger.
366 Description:
369 Return the unique species in the associated table as a list.
372 Input Parameters:
373 verbose List result set to logger (and optionally logfile)?
374 logfile List result set to this logfile (only used if verbose=true).
375 append If true, append to logfile if it already exists, if false overwrite logfile it it exists. Only used if show=true and logfile not blank.
377 --------------------------------------------------------------------------------
379 """
380 return _spectralline.spectralline_species(self, *args, **kwargs)
383 def chemnames(self, *args, **kwargs):
384 """
385 chemnames(self, _verbose, _logfile, _append) -> record *
389 Summary:
390 List the unique chemical names in the associated table to the logger.
392 Description:
395 Return the unique chemical names in the associated table as a list.
398 Input Parameters:
399 verbose List result set to logger (and optionally logfile)?
400 logfile List result set to this logfile (only used if verbose=true).
401 append If true, append to logfile if it already exists, if false overwrite logfile it it exists. Only used if show=true and logfile not blank.
403 --------------------------------------------------------------------------------
405 """
406 return _spectralline.spectralline_chemnames(self, *args, **kwargs)
409 def nrows(self):
410 """
411 nrows(self) -> long
415 Summary:
416 Get the number of rows in the associated spectral line table.
418 Description:
421 Get the number of rows in the associated spectral line table.
424 --------------------------------------------------------------------------------
426 """
427 return _spectralline.spectralline_nrows(self)
429 __swig_destroy__ = _spectralline.delete_spectralline
430 __del__ = lambda self: None
431spectralline_swigregister = _spectralline.spectralline_swigregister
432spectralline_swigregister(spectralline)
434# This file is compatible with both classic and new-style classes.