Coverage for /wheeldirectory/casa-6.7.0-12-py3.10.el8/lib/py/lib/python3.10/site-packages/casatools/__init__.py: 52%
183 statements
« prev ^ index » next coverage.py v7.6.4, created at 2024-10-31 17:39 +0000
1from __future__ import absolute_import
2__name__ = 'casatools'
3__all__ = [ "ctsys", "version", "version_string"
4 'image',
5 'logsink',
6 'coordsys',
7 'synthesisutils',
8 'synthesisnormalizer',
9 'calanalysis',
10 'mstransformer',
11 'calibrater',
12 'functional',
13 'table',
14 'measures',
15 'imagepol',
16 'simulator',
17 'sdm',
18 'synthesisimstore',
19 'miriadfiller',
20 'ms',
21 'vpmanager',
22 'synthesisdeconvolver',
23 'vlafiller',
24 'sakura',
25 'linearmosaic',
26 'tablerow',
27 'iterbotsink',
28 'sidebandseparator',
29 'imagemetadata',
30 'atcafiller',
31 'agentflagger',
32 'synthesismaskhandler',
33 'regionmanager',
34 'msmetadata',
35 'imager',
36 'singledishms',
37 'atmosphere',
38 'quanta',
39 'synthesisimager',
40 'componentlist',
41 'spectralline',
42 'wvr'
43 ]
44from .image import image
45from .logsink import logsink
46from .coordsys import coordsys
47from .synthesisutils import synthesisutils
48from .synthesisnormalizer import synthesisnormalizer
49from .calanalysis import calanalysis
50from .mstransformer import mstransformer
51from .calibrater import calibrater
52from .functional import functional
53from .table import table
54from .measures import measures
55from .imagepol import imagepol
56from .simulator import simulator
57from .sdm import sdm
58from .synthesisimstore import synthesisimstore
59from .miriadfiller import miriadfiller
60from .ms import ms
61from .vpmanager import vpmanager
62from .wvr import wvr
63from .synthesisdeconvolver import synthesisdeconvolver
64from .vlafiller import vlafiller
65from .sakura import sakura
66from .linearmosaic import linearmosaic
67from .tablerow import tablerow
68from .iterbotsink import iterbotsink
69from .sidebandseparator import sidebandseparator
70from .imagemetadata import imagemetadata
71from .atcafiller import atcafiller
72from .agentflagger import agentflagger
73from .synthesismaskhandler import synthesismaskhandler
74from .regionmanager import regionmanager
75from .msmetadata import msmetadata
76from .imager import imager
77from .singledishms import singledishms
78from .atmosphere import atmosphere
79from .quanta import quanta
80from .synthesisimager import synthesisimager
81from .componentlist import componentlist
82from .spectralline import spectralline
83from .utils import utils as __utils
84import os as __os
85import sys as __sys
86from casaconfig import get_data_info, do_auto_updates, config
87from casaconfig import UnsetMeasurespath, AutoUpdatesNotAllowed, BadLock, BadReadme, NoReadme, RemoteError
88# useful to use here
89from casaconfig.private.print_log_messages import print_log_messages
91sakura( ).initialize_sakura( ) ## sakura requires explicit initialization
94user_datapath = config.datapath
95user_nogui = config.nogui
96user_agg = config.agg
97user_pipeline = config.pipeline
98user_cachedir = __os.path.abspath(__os.path.expanduser(config.cachedir))
99user_measurespath = config.measurespath
100user_verbose = config.casaconfig_verbose
102logger = logsink(config.logfile) if (hasattr(config,'logfile') and config.logfile is not None) else None
104# data checks, only if user_measurespath is not None
105data_info = None
106measures_found = False
107isSevere = False
108# accumuale messages, less confusing when the logger is being redirected to the terminal
109msgs = ['']
111config_except = None
113# first, attempt any auto updates
114try:
115 # this uses config.measurespath, config.measures_auto_update and config.data_auto_update as appropriate
116 do_auto_updates(config, logger)
118except UnsetMeasurespath as exc:
119 msgs.append(str(exc))
120 isSevere = True
121 msgs.append('')
122 msgs.append('Either set measurespath in your personal config.py in ~/.casa or a site config file.')
123 msgs.append('CASA may still work if the IERS data can be found in datapath, but this problem is likely to cause casatools to fail to load.')
124 msgs.append('')
125 # ctsys initialize needs a string for measurespath, leave it empty, it might still work (probably not)
126 user_measurespath = ""
127 # make sure this prints
128 user_verbose = 2
129 config_except = exc
131except AutoUpdatesNotAllowed as exc:
132 msgs.append(str(exc))
133 msgs.append('')
134 msgs.append('Warning: measurespath must exist as a directory and it must be owned by the user.')
135 msgs.append('Warning: no auto update is possible on this measurespath by this user.')
136 msgs.append('')
137 # this is reraised only if the data isn't found in datapath
138 # make sure this prints
139 user_verbose = 2
140 config_except = exc
142except BadLock as exc:
143 msgs.append(str(exc))
144 # this possibly indicates a serious problem, reraise this if the data can't be found
145 # it's severe, it will print
146 isSevere = True
147 config_except = exc
149except BadReadme as exc:
150 msgs.append(str(exc))
151 # this likely indicates a problem, reraise this if the data can't be found
152 msgs.append('')
153 msgs.append('Some or all of the expected auto updates did not happen.')
154 msgs.append('This indicates something went wrong on a previous update and the data should be reinstalled.')
155 msgs.append('Updates will continue to fail until the data are reinstalled.')
156 msgs.append('If the IERSeop2000 table is found in datapath then casatools will import.')
157 msgs.append('')
158 # it's severe, it will print
159 isSevere = True
160 config_except = exc
162except NoReadme as exc:
163 # this is a symptom that's fully explained here and possibly again if this is reraised, don't print out str(exc) here
164 msgs.append('Some or all of the expected auto updates did not happen.')
165 msgs.append('This indicates that measurespath is not empty and does not contain data maintained by casaconfig.')
166 msgs.append('If the IERSeop2000 table is found in datapth then casatools will import.')
167 msgs.append('')
168 # print this
169 user_verbose = 2
170 config_except = exc
172except RemoteError as exc:
173 msgs.append(str(exc))
174 msgs.append('')
175 msgs.append('Some or all of the expepcted auto updates did not happen.')
176 msgs.append('Either there is no network connection, there is no route to the remote server, or the remote server is offline')
177 msgs.append('If the IERSeop2000 table is found in datapath then casatools will import without any updates. Try again later for updates')
178 msgs.append('')
179 # print this
180 user_verbose = 2
181 config_except = exc
183except Exception as exc:
184 msgs.append('ERROR! Unexpected exception while doing auto updates or checking on the status of the data at measurespath')
185 print(str(exc))
186 # print this
187 # this seems severe, it will print
188 isSevere = True
189 config_except = exc
191# now try and get any info
192# skip this step if UnsetMeasurespath was previously raised
193if not isinstance(config_except,UnsetMeasurespath):
194 try:
196 data_info = get_data_info(user_measurespath, logger)
197 if data_info['casarundata'] is None:
198 isSevere = True
199 msgs.append('The expected casa data was not found at measurespath. CASA may still work if the data can be found in datapath.')
200 elif data_info['casarundata']['version'] == 'invalid':
201 isSevere = True
202 msgs.append('The contents of measurespath do not appear to be casarundata. CASA may still work if the data can be found in datapath.')
203 elif data_info['casarundata']['version'] == 'unknown':
204 msgs.append('The casa data found at measurespath is not being maintained by casaconfig.')
205 else:
206 pass
208 if data_info['measures'] is None:
209 isSevere = True
210 msgs.append('The expected measures data was not found at measurespath. CASA may still work if the data can be found in datapath.')
211 elif data_info['measures']['version'] == 'invalid':
212 isSevere = True
213 msgs.append('The contents of measurespath do not appear to include measures data. CASA may still work if the data can be found in datapath.')
214 elif data_info['measures']['version'] == 'unknown':
215 msgs.append('The measures data found at measurespath is not being maintained by casaconfig.')
216 measures_found = True
217 else:
218 measures_found = True
220 except Exception as exc:
221 # no exceptions are expected here
222 msgs.append('ERROR! Unexpected exception while checking on the status of the data at measurespath')
223 # this seems severe
224 isSevere = True
225 print(str(exc))
226 config_except = exc
228if (len(msgs) > 1):
229 msgs.append('visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information')
230 msgs.append('')
231 print_log_messages(msgs, logger, isSevere, verbose=user_verbose)
233# don't use user_measurespath here if not ok
234if not measures_found:
235 user_measurespath = ""
236else:
237 # always append measurespath to datapath if not already found there to be used by ctsys.initialize
238 add_mp = True
239 for apath in user_datapath:
240 if __os.path.exists(apath) and __os.path.samefile(apath, user_measurespath):
241 add_mp = False
242 break
243 if add_mp:
244 user_datapath.append(user_measurespath)
246ctsys = __utils( )
247ctsys.initialize( __sys.executable, user_measurespath, user_datapath, user_nogui,
248 user_agg, user_pipeline, user_cachedir )
250# try and find the IERS data
251__resolved_iers = ctsys.resolve('geodetic/IERSeop2000')
252if __resolved_iers == 'geodetic/IERSeop2000':
253 # this match means ctsys.resolve did not found it in datapath
254 # if there was a previously raised casaconfig exception, re-raise it here so that casashell can know what went wrong
255 if config_except is not None:
256 print("measures data is not available")
257 raise config_except
258 else:
259 raise ImportError('measures data is not available, visit https://casadocs.readthedocs.io/en/stable/notebooks/external-data.html for more information')
260else:
261 # if measures was not previously found, use this path as measurespath
262 if not measures_found:
263 # this removes the "geodetic/IERSeop2000" and the preceding "/" from the returned path, that's the measurespath to be used here
265 user_measurespath = __resolved_iers[:-21]
266 ctsys.setmeasurespath(user_measurespath)
267 print_log_messages(["Using location of IERSeop2000 table found in datapath for measurespath %s" % user_measurespath], logger)
268 else:
269 # check that this path is the same as what is expected at measurespath
270 if not __os.path.samefile(__resolved_iers, __os.path.join(user_measurespath,'geodetic/IERSeop2000')):
271 print("\nThe path to the geodetic IERSeop2000 table in measurespath is not the same location found first in datapath for that table.")
272 print("CASA should work in this configuration. The datapath list will be used to search for data needed by CASA.")
273 print("\nThe measurespath value is used to find that IERS table and this indicates that the")
274 print("measures tables present in datapath may be different from those found in measurespath.")
275 print("\nIf this was not expected you may want to use your config file (normally at ~/.casa/config.py) to")
276 print("set datapath to put measurespath first or set measurespath to include the measures data found in datapath.")
277 logger.post("WARNING: geodetic/IERSeop2000 found at measurespath is not the same table as found in datapath",'WARN')
279from .coercetype import coerce as __coerce
281__coerce.set_ctsys(ctsys) ## used to locate files from a partial path
283def version( ): return list(ctsys.version( ))
284def version_string( ): return ctsys.version_string( )
286import atexit as __atexit
287__atexit.register(ctsys.shutdown) ## c++ shutdown