Build: #2 was successful

Job: Test tools RHEL7 was successful

Stages & jobs

  1. Default Stage

  2. Publish

  3. Create Upload Plan Branch

Job result summary

Completed
Duration
15 minutes
Agent
cbt-el7-6.cv.nrao.edu
Total tests
638

Tests

  • 638 tests in total
  • 4 tests were quarantined / skipped
  • 10 minutes taken in total.

Error summary

The build generated some errors. See the full build log for more details.

Error response from daemon: No such container: wheel-container-test
Error: No such container: wheel-container-test
2022-07-11 13:48:44        SEVERE        image::regrid        Exception Reported: Exception: There is no overlap between the (region chosen in) the input image and the output image with respect to the axes being regridded..
2022-07-11 13:48:44        SEVERE        image::regrid+        ... thrown by std::shared_ptr<casa6core::ImageInterface<T> > casa::ImageRegridder<T>::_regrid() const [with T = float] at File: src/code/imageanalysis/ImageAnalysis/ImageRegridder.tcc, line: 155
2022-07-11 13:48:44        INFO        ImageMaskAttacher::makeMask        Created and initialized mask `mask0'
2022-07-11 13:48:44        WARN        ImageRegridder::_doImagesOverlap        At least one of the images exceeds one degree on at one side, not checking for direction plane overlap.
2022-07-11 13:48:44        INFO        ImageRegrid::_checkAxes         The Stokes axis cannot be regridded - removing from list
2022-07-11 13:48:44        WARN        ImageRegrid::regrid        You are regridding an image whose beam is not well sampled by the pixel size.  Total flux can be lost when regridding such images, especially when the new pixel size is larger than the old pixel size. It is recommended to check the total flux of your input and output image, and if necessary rebin the input to have smaller pixels.
2022-07-11 13:48:44        INFO        SubImageFactory::createImage        Creating image 'gal_regrid_out.image' of shape [300, 300, 1, 46]
2022-07-11 13:48:44        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
2022-07-11 13:48:44        WARN        image::open (file src/tools/image/image_cmpt.cc, line 4129)        Another image is already open, closing first
2022-07-11 13:48:44        INFO        ImageFactory::createImage        Created Paged image 'maskim' of shape [200, 200, 1, 1] with float valued pixels.
2022-07-11 13:48:44        INFO        ImageFactory::createImage        Created Temp image  of shape [200, 200, 1, 20] with float valued pixels.
2022-07-11 13:48:45        SEVERE        image::regrid        Exception Reported: The input image shape ([200, 200, 1, 20]) and mask shape ([200, 200, 1, 1]) are different, and it was specified that the mask should not be extended, so the mask cannot be applied to the (sub)image. Specifying that the mask should be extended may resolve the issue at File: src/code/imageanalysis/ImageAnalysis/SubImageFactory.tcc, line: 306
2022-07-11 13:48:45        INFO        CasacRegionManager::fromBCS        No directional region specified. Using full positional plane.
2022-07-11 13:48:45        INFO        CasacRegionManager::fromBCS        Using polarizations ALL
2022-07-11 13:48:45        INFO        ImageMaskAttacher::makeMask        Created and initialized mask `mask0'
2022-07-11 13:48:45        WARN        ImageRegridder::_doImagesOverlap        At least one of the images exceeds one degree on at one side, not checking for direction plane overlap.
2022-07-11 13:48:45        INFO        ImageRegrid::_checkAxes         The Stokes axis cannot be regridded - removing from list
2022-07-11 13:48:45        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
2022-07-11 13:48:45        SEVERE        image::regrid        Exception Reported: The input image shape ([200, 200, 1, 20]) and mask shape ([200, 200, 1, 1]) are different, and it was specified that the mask should not be extended, so the mask cannot be applied to the (sub)image. Specifying that the mask should be extended may resolve the issue at File: src/code/imageanalysis/ImageAnalysis/SubImageFactory.tcc, line: 306
2022-07-11 13:48:45        INFO        ImageMaskAttacher::makeMask        Created and initialized mask `mask0'
2022-07-11 13:48:45        WARN        ImageRegridder::_doImagesOverlap        At least one of the images exceeds one degree on at one side, not checking for direction plane overlap.
2022-07-11 13:48:45        INFO        ImageRegrid::_checkAxes         The Stokes axis cannot be regridded - removing from list
2022-07-11 13:48:45        INFO        ImageMaskAttacher::makeMask        Created mask `mask0'
2022-07-11 13:48:45        INFO        name::        No table opened.
2022-07-11 13:48:45        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:45        INFO        name::        No table opened.
2022-07-11 13:48:45        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'blahxx.im' of shape [1536, 1536, 1, 2]
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        SEVERE        image::open (file src/tools/image/image_cmpt.cc, line 4129)        Exception Reported: Exception: File name is empty.
2022-07-11 13:48:46        SEVERE        image::open (file src/tools/image/image_cmpt.cc, line 4129)+        ... thrown by static void casa::ImageFactory::_checkInfile(const casa6core::String&) at File: src/code/imageanalysis/ImageAnalysis/ImageFactory2.cc, line: 373
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 2 were given for reordering. Number of axes to reorder must match the number of image axes
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 2 were given for reordering. Number of axes to reorder must match the number of image axes
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Axis number 0 specified multiple times in order parameter 10 . It can only be specified once.
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Axis number 0 specified multiple times in order parameter 10 . It can only be specified once.
2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Image has 3 axes but 2 were given. Number of given axes must match the number of image axes
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Image has 3 axes but 2 were given. Number of given axes must match the number of image axes
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 5 were given for reordering. Number of axes to reorder must match the number of image axes
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image has 3 axes but 5 were given for reordering. Number of axes to reorder must match the number of image axes
2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Image has 3 axes but 4 were given. Number of given axes must match the number of image axes
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Image has 3 axes but 4 were given. Number of given axes must match the number of image axes
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 123 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        No axis matches requested axis s. Image axis names are [right ascension, declination, frequency]
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        No axis matches requested axis s. Image axis names are [right ascension, declination, frequency]
2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Ambiguous axis specification. Both r and r match image axis name right ascension
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        CoordinateSystem::getWorldAxesOrder (file casacore/coordinates/Coordinates/CoordinateSystem.cc, line 4668)        Ambiguous axis specification. Both r and r match image axis name right ascension
2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 103 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        SEVERE        image::transpose (file src/tools/image/image_cmpt.cc, line 6309)        Exception Reported: 2022-07-11 13:48:46        SEVERE        ImageTransposer::_getOrder        Image does not contain zero-based axis number 3 but this was incorrectly specified in order parameter. 103 All digits in the order parameter must be greater than or equal to zero and less than the number of image axes.
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        ImageFactory::createImage        Created Temp image  of shape [10, 10, 4, 10] with float valued pixels.
2022-07-11 13:48:46        INFO        ::::ImageFactory::createImage        Created Temp image  of shape [10, 10, 4, 10] with float valued pixels.
2022-07-11 13:48:46        INFO        ::::image::fromshape        Ran ia.fromshape
2022-07-11 13:48:46        INFO        ::::image::fromshape        ia.fromshape(outfile="", shape=[10,10,4,10], csys={...}, linear=false, overwrite=false, log=true, type="f")
2022-07-11 13:48:46        INFO        ::::image::transpose        Ran ia.transpose
2022-07-11 13:48:46        INFO        ::::image::transpose        ia.transpose(outfile="", order="3210")
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        ImageFactory::createImage        Created Temp image  of shape [10, 20, 30] with float valued pixels.
2022-07-11 13:48:46        INFO        BeamManipulator::set        Setting (global) restoring beam.
2022-07-11 13:48:46        INFO        BeamManipulator::set        Beam parameters:  Major          : 4 arcmin
2022-07-11 13:48:46        INFO        BeamManipulator::set+          Minor          : 3 arcmin
2022-07-11 13:48:46        INFO        BeamManipulator::set+          Position Angle : 0 deg
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'straight_copy_0' of shape [5, 6, 7]
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'straight_copy_1' of shape [5, 6, 7]
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'straight_copy_2' of shape [5, 6, 7]
2022-07-11 13:48:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [0, 1, 2]
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'straight_copy_3' of shape [5, 6, 7]
2022-07-11 13:48:46        INFO        ImageTransposer::transpose        Old to new axis mapping is [0, 1, 2]
2022-07-11 13:48:46        INFO        name::        No table opened.
2022-07-11 13:48:46        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'transpose_0' of shape [6, 7, 5]
2022-07-11 13:48:46        INFO        SubImageFactory::createImage        Creating image 'transpose_1' of shape [6, 7, 5]
2022-07-11 13:48:47        INFO        SubImageFactory::createImage        Creating image 'transpose_2' of shape [6, 7, 5]
2022-07-11 13:48:47        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
2022-07-11 13:48:47        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
2022-07-11 13:48:47        INFO        SubImageFactory::createImage        Creating image 'transpose_3' of shape [6, 7, 5]
2022-07-11 13:48:47        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
2022-07-11 13:48:47        INFO        ImageTransposer::transpose        Old to new axis mapping is [1, 2, 0]
2022-07-11 13:48:47        INFO        name::        No table opened.
2022-07-11 13:48:47        INFO        showcache::        The Table Cache is empty.
2022-07-11 13:48:48        WARN        ImageRegrid::regrid        You are regridding an image whose beam is not well sampled by the pixel size.  Total flux can be lost when regridding such images, especially when the new pixel size is larger than the old pixel size. It is recommended to check the total flux of your input and output image, and if necessary rebin the input to have smaller pixels.
2022-07-11 13:48:50        WARN        ImageRegrid::regrid        You are regridding an image whose beam is not well sampled by the pixel size.  Total flux can be lost when regridding such images, especially when the new pixel size is larger than the old pixel size. It is recommended to check the total flux of your input and output image, and if necessary rebin the input to have smaller pixels.
2022-07-11 13:48:51        WARN        ImageRegrid::regrid        You are regridding an image whose beam is not well sampled by the pixel size.  Total flux can be lost when regridding such images, especially when the new pixel size is larger than the old pixel size. It is recommended to check the total flux of your input and output image, and if necessary rebin the input to have smaller pixels.
Traceback (most recent call last):
  File "runtest.py", line 593, in run
    shutil.copy2("{}{}.py".format(workdir + "tests/",test), workdir + "{}/".format(test if not test.endswith(".py") else test[:-3]))
  File "/usr/local/lib/python3.6/shutil.py", line 257, in copy2
    copyfile(src, dst, follow_symlinks=follow_symlinks)
  File "/usr/local/lib/python3.6/shutil.py", line 120, in copyfile
    with open(src, 'rb') as fsrc:
FileNotFoundError: [Errno 2] No such file or directory: '/home/casatest/casa6/casatestutils/nosedir/tests/test_tool_image_fromcomplist.py'
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 6002k  100 6002k    0     0  23.5M      0 --:--:-- --:--:-- --:--:-- 23.7M
/export/home/cbt-el7-6/bamboohome/temp/CASA-C6DTF199-JOB1-2-ScriptBuildTask-7706341273579354989.sh: line 9: [: -eq: unary operator expected
HTTPError: 400 Client Error: Repository does not allow updating assets: casa-dev-wheel for url: https://casa-pip.nrao.edu:443/repository/casa-dev-wheel/