LCOV - code coverage report
Current view: top level - alma/ASDM - CalFluxTable.cc (source / functions) Hit Total Coverage
Test: casacpp_coverage.info Lines: 155 427 36.3 %
Date: 2024-12-11 20:54:31 Functions: 17 36 47.2 %

          Line data    Source code
       1             : 
       2             : /*
       3             :  * ALMA - Atacama Large Millimeter Array
       4             :  * (c) European Southern Observatory, 2002
       5             :  * (c) Associated Universities Inc., 2002
       6             :  * Copyright by ESO (in the framework of the ALMA collaboration),
       7             :  * Copyright by AUI (in the framework of the ALMA collaboration),
       8             :  * All rights reserved.
       9             :  * 
      10             :  * This library is free software; you can redistribute it and/or
      11             :  * modify it under the terms of the GNU Lesser General Public
      12             :  * License as published by the Free software Foundation; either
      13             :  * version 2.1 of the License, or (at your option) any later version.
      14             :  * 
      15             :  * This library is distributed in the hope that it will be useful,
      16             :  * but WITHOUT ANY WARRANTY, without even the implied warranty of
      17             :  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
      18             :  * Lesser General Public License for more details.
      19             :  * 
      20             :  * You should have received a copy of the GNU Lesser General Public
      21             :  * License along with this library; if not, write to the Free Software
      22             :  * Foundation, Inc., 59 Temple Place, Suite 330, Boston,
      23             :  * MA 02111-1307  USA
      24             :  *
      25             :  * Warning!
      26             :  *  -------------------------------------------------------------------- 
      27             :  * | This is generated code!  Do not modify this file.                  |
      28             :  * | If you do, all changes will be lost when the file is re-generated. |
      29             :  *  --------------------------------------------------------------------
      30             :  *
      31             :  * File CalFluxTable.cpp
      32             :  */
      33             : #include <alma/ASDM/ConversionException.h>
      34             : #include <alma/ASDM/DuplicateKey.h>
      35             : #include <alma/ASDM/OutOfBoundsException.h>
      36             : 
      37             : using asdm::ConversionException;
      38             : using asdm::DuplicateKey;
      39             : using asdm::OutOfBoundsException;
      40             : 
      41             : #include <alma/ASDM/ASDM.h>
      42             : #include <alma/ASDM/CalFluxTable.h>
      43             : #include <alma/ASDM/CalFluxRow.h>
      44             : #include <alma/ASDM/Parser.h>
      45             : 
      46             : using asdm::ASDM;
      47             : using asdm::CalFluxTable;
      48             : using asdm::CalFluxRow;
      49             : using asdm::Parser;
      50             : 
      51             : #include <iostream>
      52             : #include <fstream>
      53             : #include <iterator>
      54             : #include <sstream>
      55             : #include <set>
      56             : #include <algorithm>
      57             : using namespace std;
      58             : 
      59             : #include <alma/ASDM/Misc.h>
      60             : using namespace asdm;
      61             : 
      62             : #include <libxml/parser.h>
      63             : #include <libxml/tree.h>
      64             : 
      65             : #ifndef WITHOUT_BOOST
      66             : #include "boost/filesystem/operations.hpp"
      67             : #include <boost/algorithm/string.hpp>
      68             : #else
      69             : #include <sys/stat.h>
      70             : #endif
      71             : 
      72             : namespace asdm {
      73             :         // The name of the entity we will store in this table.
      74             :         static string entityNameOfCalFlux = "CalFlux";
      75             :         
      76             :         // An array of string containing the names of the columns of this table.
      77             :         // The array is filled in the order : key, required value, optional value.
      78             :         //
      79             :         static string attributesNamesOfCalFlux_a[] = {
      80             :                 
      81             :                         "sourceName"
      82             :                 ,
      83             :                         "calDataId"
      84             :                 ,
      85             :                         "calReductionId"
      86             :                 
      87             :                 
      88             :                         , "startValidTime"
      89             :                 
      90             :                         , "endValidTime"
      91             :                 
      92             :                         , "numFrequencyRanges"
      93             :                 
      94             :                         , "numStokes"
      95             :                 
      96             :                         , "frequencyRanges"
      97             :                 
      98             :                         , "fluxMethod"
      99             :                 
     100             :                         , "flux"
     101             :                 
     102             :                         , "fluxError"
     103             :                 
     104             :                         , "stokes"
     105             :                                 
     106             :                 
     107             :                         , "direction"
     108             :                 
     109             :                         , "directionCode"
     110             :                 
     111             :                         , "directionEquinox"
     112             :                 
     113             :                         , "PA"
     114             :                 
     115             :                         , "PAError"
     116             :                 
     117             :                         , "size"
     118             :                 
     119             :                         , "sizeError"
     120             :                 
     121             :                         , "sourceModel"
     122             :                                 
     123             :         };
     124             :         
     125             :         // A vector of string whose content is a copy of the strings in the array above.
     126             :         //
     127             :         static vector<string> attributesNamesOfCalFlux_v (attributesNamesOfCalFlux_a, attributesNamesOfCalFlux_a + sizeof(attributesNamesOfCalFlux_a) / sizeof(attributesNamesOfCalFlux_a[0]));
     128             : 
     129             :         // An array of string containing the names of the columns of this table.
     130             :         // The array is filled in the order where the names would be read by default in the XML header of a file containing
     131             :         // the table exported in binary mode.
     132             :         //      
     133             :         static string attributesNamesInBinOfCalFlux_a[] = {
     134             :     
     135             :          "sourceName" , "calDataId" , "calReductionId" , "startValidTime" , "endValidTime" , "numFrequencyRanges" , "numStokes" , "frequencyRanges" , "fluxMethod" , "flux" , "fluxError" , "stokes" 
     136             :         ,
     137             :          "direction" , "directionCode" , "directionEquinox" , "PA" , "PAError" , "size" , "sizeError" , "sourceModel" 
     138             :     
     139             :         };
     140             :                                         
     141             :         // A vector of string whose content is a copy of the strings in the array above.
     142             :         //
     143             :         static vector<string> attributesNamesInBinOfCalFlux_v(attributesNamesInBinOfCalFlux_a, attributesNamesInBinOfCalFlux_a + sizeof(attributesNamesInBinOfCalFlux_a) / sizeof(attributesNamesInBinOfCalFlux_a[0]));           
     144             :         
     145             : 
     146             :         // The array of attributes (or column) names that make up key key.
     147             :         //
     148             :         string keyOfCalFlux_a[] = {
     149             :         
     150             :                 "sourceName"
     151             :         ,
     152             :                 "calDataId"
     153             :         ,
     154             :                 "calReductionId"
     155             :                  
     156             :         };
     157             :          
     158             :         // A vector of strings which are copies of those stored in the array above.
     159             :         vector<string> keyOfCalFlux_v(keyOfCalFlux_a, keyOfCalFlux_a + sizeof(keyOfCalFlux_a) / sizeof(keyOfCalFlux_a[0]));
     160             : 
     161             :         /**
     162             :          * Return the list of field names that make up key key
     163             :          * as a const reference to a vector of strings.
     164             :          */     
     165           0 :         const vector<string>& CalFluxTable::getKeyName() {
     166           0 :                 return keyOfCalFlux_v;
     167             :         }
     168             : 
     169             : 
     170         118 :         CalFluxTable::CalFluxTable(ASDM &c) : container(c) {
     171             : 
     172             :                 // Define a default entity.
     173         118 :                 entity.setEntityId(EntityId("uid://X0/X0/X0"));
     174         118 :                 entity.setEntityIdEncrypted("na");
     175         118 :                 entity.setEntityTypeName("CalFluxTable");
     176         118 :                 entity.setEntityVersion("1");
     177         118 :                 entity.setInstanceVersion("1");
     178             :                 
     179             :                 // Archive XML
     180         118 :                 archiveAsBin = true;
     181             :                 
     182             :                 // File XML
     183         118 :                 fileAsBin = true;
     184             :                 
     185             :                 // By default the table is considered as present in memory
     186         118 :                 presentInMemory = true;
     187             :                 
     188             :                 // By default there is no load in progress
     189         118 :                 loadInProgress = false;
     190         118 :         }
     191             :         
     192             : /**
     193             :  * A destructor for CalFluxTable.
     194             :  */
     195         236 :         CalFluxTable::~CalFluxTable() {
     196         120 :                 for (unsigned int i = 0; i < privateRows.size(); i++) 
     197           2 :                         delete(privateRows.at(i));
     198         236 :         }
     199             : 
     200             :         /**
     201             :          * Container to which this table belongs.
     202             :          */
     203           6 :         ASDM &CalFluxTable::getContainer() const {
     204           6 :                 return container;
     205             :         }
     206             : 
     207             :         /**
     208             :          * Return the number of rows in the table.
     209             :          */
     210          39 :         unsigned int CalFluxTable::size() const {
     211          39 :                 if (presentInMemory) 
     212          39 :                         return privateRows.size();
     213             :                 else
     214           0 :                         return declaredSize;
     215             :         }
     216             :         
     217             :         /**
     218             :          * Return the name of this table.
     219             :          */
     220        4050 :         string CalFluxTable::getName() const {
     221        4050 :                 return entityNameOfCalFlux;
     222             :         }
     223             :         
     224             :         /**
     225             :          * Return the name of this table.
     226             :          */
     227           0 :         string CalFluxTable::name() {
     228           0 :                 return entityNameOfCalFlux;
     229             :         }
     230             :         
     231             :         /**
     232             :          * Return the the names of the attributes (or columns) of this table.
     233             :          */
     234           0 :         const vector<string>& CalFluxTable::getAttributesNames() { return attributesNamesOfCalFlux_v; }
     235             :         
     236             :         /**
     237             :          * Return the the names of the attributes (or columns) of this table as they appear by default
     238             :          * in an binary export of this table.
     239             :          */
     240           0 :         const vector<string>& CalFluxTable::defaultAttributesNamesInBin() { return attributesNamesInBinOfCalFlux_v; }
     241             : 
     242             :         /**
     243             :          * Return this table's Entity.
     244             :          */
     245           0 :         Entity CalFluxTable::getEntity() const {
     246           0 :                 return entity;
     247             :         }
     248             : 
     249             :         /**
     250             :          * Set this table's Entity.
     251             :          */
     252           1 :         void CalFluxTable::setEntity(Entity e) {
     253           1 :                 this->entity = e; 
     254           1 :         }
     255             :         
     256             :         //
     257             :         // ====> Row creation.
     258             :         //
     259             :         
     260             :         /**
     261             :          * Create a new row.
     262             :          */
     263           1 :         CalFluxRow *CalFluxTable::newRow() {
     264           1 :                 return new CalFluxRow (*this);
     265             :         }
     266             :         
     267             : 
     268             :         /**
     269             :          * Create a new row initialized to the specified values.
     270             :          * @return a pointer on the created and initialized row.
     271             :         
     272             :          * @param sourceName 
     273             :         
     274             :          * @param calDataId 
     275             :         
     276             :          * @param calReductionId 
     277             :         
     278             :          * @param startValidTime 
     279             :         
     280             :          * @param endValidTime 
     281             :         
     282             :          * @param numFrequencyRanges 
     283             :         
     284             :          * @param numStokes 
     285             :         
     286             :          * @param frequencyRanges 
     287             :         
     288             :          * @param fluxMethod 
     289             :         
     290             :          * @param flux 
     291             :         
     292             :          * @param fluxError 
     293             :         
     294             :          * @param stokes 
     295             :         
     296             :      */
     297           0 :         CalFluxRow* CalFluxTable::newRow(std::string sourceName, Tag calDataId, Tag calReductionId, ArrayTime startValidTime, ArrayTime endValidTime, int numFrequencyRanges, int numStokes, std::vector<std::vector<Frequency > > frequencyRanges, FluxCalibrationMethodMod::FluxCalibrationMethod fluxMethod, std::vector<std::vector<double > > flux, std::vector<std::vector<double > > fluxError, std::vector<StokesParameterMod::StokesParameter > stokes){
     298           0 :                 CalFluxRow *row = new CalFluxRow(*this);
     299             :                         
     300           0 :                 row->setSourceName(sourceName);
     301             :                         
     302           0 :                 row->setCalDataId(calDataId);
     303             :                         
     304           0 :                 row->setCalReductionId(calReductionId);
     305             :                         
     306           0 :                 row->setStartValidTime(startValidTime);
     307             :                         
     308           0 :                 row->setEndValidTime(endValidTime);
     309             :                         
     310           0 :                 row->setNumFrequencyRanges(numFrequencyRanges);
     311             :                         
     312           0 :                 row->setNumStokes(numStokes);
     313             :                         
     314           0 :                 row->setFrequencyRanges(frequencyRanges);
     315             :                         
     316           0 :                 row->setFluxMethod(fluxMethod);
     317             :                         
     318           0 :                 row->setFlux(flux);
     319             :                         
     320           0 :                 row->setFluxError(fluxError);
     321             :                         
     322           0 :                 row->setStokes(stokes);
     323             :         
     324           0 :                 return row;             
     325             :         }       
     326             :         
     327             : 
     328             : 
     329           0 : CalFluxRow* CalFluxTable::newRow(CalFluxRow* row) {
     330           0 :         return new CalFluxRow(*this, row);
     331             : }
     332             : 
     333             :         //
     334             :         // Append a row to its table.
     335             :         //
     336             : 
     337             :         
     338             :          
     339             :         /**
     340             :          * Add a row.
     341             :          * @throws DuplicateKey Thrown if the new row has a key that is already in the table.
     342             :          * @param x A pointer to the row to be added.
     343             :          * @return x
     344             :          */
     345           0 :         CalFluxRow* CalFluxTable::add(CalFluxRow* x) {
     346             :                 
     347           0 :                 if (getRowByKey(
     348           0 :                                                 x->getSourceName()
     349             :                                                 ,
     350           0 :                                                 x->getCalDataId()
     351             :                                                 ,
     352           0 :                                                 x->getCalReductionId()
     353             :                                                 ))
     354             :                         //throw DuplicateKey(x.getSourceName() + "|" + x.getCalDataId() + "|" + x.getCalReductionId(),"CalFlux");
     355           0 :                         throw DuplicateKey("Duplicate key exception in ","CalFluxTable");
     356             :                 
     357           0 :                 row.push_back(x);
     358           0 :                 privateRows.push_back(x);
     359           0 :                 x->isAdded(true);
     360           0 :                 return x;
     361             :         }
     362             : 
     363             :         
     364             :                 
     365           1 :         void CalFluxTable::addWithoutCheckingUnique(CalFluxRow * x) {
     366           1 :                 if (getRowByKey(
     367           1 :                                                 x->getSourceName()
     368             :                                                 ,
     369           2 :                                                 x->getCalDataId()
     370             :                                                 ,
     371           2 :                                                 x->getCalReductionId()
     372           1 :                                                 ) != (CalFluxRow *) 0) 
     373           0 :                         throw DuplicateKey("Dupicate key exception in ", "CalFluxTable");
     374           1 :                 row.push_back(x);
     375           1 :                 privateRows.push_back(x);
     376           1 :                 x->isAdded(true);
     377           1 :         }
     378             : 
     379             : 
     380             : 
     381             : 
     382             :         // 
     383             :         // A private method to append a row to its table, used by input conversion
     384             :         // methods, with row uniqueness.
     385             :         //
     386             : 
     387             :         
     388             :         /**
     389             :          * If this table has an autoincrementable attribute then check if *x verifies the rule of uniqueness and throw exception if not.
     390             :          * Check if *x verifies the key uniqueness rule and throw an exception if not.
     391             :          * Append x to its table.
     392             :          * @param x a pointer on the row to be appended.
     393             :          * @returns a pointer on x.
     394             :          * @throws DuplicateKey
     395             :          
     396             :          */
     397           0 :         CalFluxRow*  CalFluxTable::checkAndAdd(CalFluxRow* x, bool skipCheckUniqueness)  {
     398           0 :                 if (!skipCheckUniqueness) { 
     399             :                 
     400             :                 }
     401             :                 
     402           0 :                 if (getRowByKey(
     403             :         
     404           0 :                         x->getSourceName()
     405             :         ,
     406           0 :                         x->getCalDataId()
     407             :         ,
     408           0 :                         x->getCalReductionId()
     409             :                         
     410           0 :                 )) throw DuplicateKey("Duplicate key exception in ", "CalFluxTable");
     411             :                 
     412           0 :                 row.push_back(x);
     413           0 :                 privateRows.push_back(x);
     414           0 :                 x->isAdded(true);
     415           0 :                 return x;       
     416             :         }       
     417             : 
     418             : 
     419             : 
     420             :         //
     421             :         // A private method to brutally append a row to its table, without checking for row uniqueness.
     422             :         //
     423             : 
     424           1 :         void CalFluxTable::append(CalFluxRow *x) {
     425           1 :                 privateRows.push_back(x);
     426           1 :                 x->isAdded(true);
     427           1 :         }
     428             : 
     429             : 
     430             : 
     431             : 
     432             : 
     433           2 :          vector<CalFluxRow *> CalFluxTable::get() {
     434           2 :                 checkPresenceInMemory();
     435           2 :             return privateRows;
     436             :          }
     437             :          
     438           0 :          const vector<CalFluxRow *>& CalFluxTable::get() const {
     439           0 :                 const_cast<CalFluxTable&>(*this).checkPresenceInMemory();     
     440           0 :             return privateRows;
     441             :          }       
     442             :                 
     443             : 
     444             : 
     445             : 
     446             : 
     447             :         
     448             : 
     449             :         
     450             : /*
     451             :  ** Returns a CalFluxRow* given a key.
     452             :  ** @return a pointer to the row having the key whose values are passed as parameters, or 0 if
     453             :  ** no row exists for that key.
     454             :  **
     455             :  */
     456           1 :         CalFluxRow* CalFluxTable::getRowByKey(std::string sourceName, Tag calDataId, Tag calReductionId)  {
     457           1 :         checkPresenceInMemory();
     458           1 :         CalFluxRow* aRow = 0;
     459           1 :         for (unsigned int i = 0; i < privateRows.size(); i++) {
     460           0 :                 aRow = row.at(i);
     461             :                 
     462             :                         
     463           0 :                                 if (aRow->sourceName != sourceName) continue;
     464             :                         
     465             :                 
     466             :                         
     467           0 :                                 if (aRow->calDataId != calDataId) continue;
     468             :                         
     469             :                 
     470             :                         
     471           0 :                                 if (aRow->calReductionId != calReductionId) continue;
     472             :                         
     473             :                 
     474           0 :                 return aRow;
     475             :         }
     476           1 :         return 0;               
     477             : }
     478             :         
     479             : 
     480             :         
     481             : /**
     482             :  * Look up the table for a row whose all attributes 
     483             :  * are equal to the corresponding parameters of the method.
     484             :  * @return a pointer on this row if any, 0 otherwise.
     485             :  *
     486             :                         
     487             :  * @param sourceName.
     488             :                         
     489             :  * @param calDataId.
     490             :                         
     491             :  * @param calReductionId.
     492             :                         
     493             :  * @param startValidTime.
     494             :                         
     495             :  * @param endValidTime.
     496             :                         
     497             :  * @param numFrequencyRanges.
     498             :                         
     499             :  * @param numStokes.
     500             :                         
     501             :  * @param frequencyRanges.
     502             :                         
     503             :  * @param fluxMethod.
     504             :                         
     505             :  * @param flux.
     506             :                         
     507             :  * @param fluxError.
     508             :                         
     509             :  * @param stokes.
     510             :                          
     511             :  */
     512           0 : CalFluxRow* CalFluxTable::lookup(std::string sourceName, Tag calDataId, Tag calReductionId, ArrayTime startValidTime, ArrayTime endValidTime, int numFrequencyRanges, int numStokes, std::vector<std::vector<Frequency > > frequencyRanges, FluxCalibrationMethodMod::FluxCalibrationMethod fluxMethod, std::vector<std::vector<double > > flux, std::vector<std::vector<double > > fluxError, std::vector<StokesParameterMod::StokesParameter > stokes) {
     513             :                 CalFluxRow* aRow;
     514           0 :                 for (unsigned int i = 0; i < privateRows.size(); i++) {
     515           0 :                         aRow = privateRows.at(i); 
     516           0 :                         if (aRow->compareNoAutoInc(sourceName, calDataId, calReductionId, startValidTime, endValidTime, numFrequencyRanges, numStokes, frequencyRanges, fluxMethod, flux, fluxError, stokes)) return aRow;
     517             :                 }                       
     518           0 :                 return 0;       
     519             : } 
     520             :         
     521             :                 
     522             : 
     523             :         
     524             : 
     525             : 
     526             : 
     527             : #ifndef WITHOUT_ACS
     528             :         using asdmIDL::CalFluxTableIDL;
     529             : #endif
     530             : 
     531             : #ifndef WITHOUT_ACS
     532             :         // Conversion Methods
     533             : 
     534             :         CalFluxTableIDL *CalFluxTable::toIDL() {
     535             :                 CalFluxTableIDL *x = new CalFluxTableIDL ();
     536             :                 unsigned int nrow = size();
     537             :                 x->row.length(nrow);
     538             :                 vector<CalFluxRow*> v = get();
     539             :                 for (unsigned int i = 0; i < nrow; ++i) {
     540             :                         //x->row[i] = *(v[i]->toIDL());
     541             :                         v[i]->toIDL(x->row[i]);
     542             :                 }
     543             :                 return x;
     544             :         }
     545             :         
     546             :         void CalFluxTable::toIDL(asdmIDL::CalFluxTableIDL& x) const {
     547             :                 unsigned int nrow = size();
     548             :                 x.row.length(nrow);
     549             :                 vector<CalFluxRow*> v = get();
     550             :                 for (unsigned int i = 0; i < nrow; ++i) {
     551             :                         v[i]->toIDL(x.row[i]);
     552             :                 }
     553             :         }       
     554             : #endif
     555             :         
     556             : #ifndef WITHOUT_ACS
     557             :         void CalFluxTable::fromIDL(CalFluxTableIDL x) {
     558             :                 unsigned int nrow = x.row.length();
     559             :                 for (unsigned int i = 0; i < nrow; ++i) {
     560             :                         CalFluxRow *tmp = newRow();
     561             :                         tmp->setFromIDL(x.row[i]);
     562             :                         // checkAndAdd(tmp);
     563             :                         add(tmp);
     564             :                 }
     565             :         }       
     566             : #endif
     567             : 
     568             :         
     569           0 :         string CalFluxTable::toXML()  {
     570           0 :                 string buf;
     571             : 
     572           0 :                 buf.append("<?xml version=\"1.0\" encoding=\"ISO-8859-1\"?> ");
     573           0 :                 buf.append("<CalFluxTable xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xmlns:clflx=\"http://Alma/XASDM/CalFluxTable\" xsi:schemaLocation=\"http://Alma/XASDM/CalFluxTable http://almaobservatory.org/XML/XASDM/4/CalFluxTable.xsd\" schemaVersion=\"4\" schemaRevision=\"-1\">\n");
     574             :         
     575           0 :                 buf.append(entity.toXML());
     576           0 :                 string s = container.getEntity().toXML();
     577             :                 // Change the "Entity" tag to "ContainerEntity".
     578           0 :                 buf.append("<Container" + s.substr(1,s.length() - 1)+" ");
     579           0 :                 vector<CalFluxRow*> v = get();
     580           0 :                 for (unsigned int i = 0; i < v.size(); ++i) {
     581             :                         try {
     582           0 :                                 buf.append(v[i]->toXML());
     583           0 :                         } catch (const NoSuchRow &e) {
     584           0 :                         }
     585           0 :                         buf.append("  ");
     586             :                 }               
     587           0 :                 buf.append("</CalFluxTable> ");
     588           0 :                 return buf;
     589           0 :         }
     590             : 
     591             :         
     592           0 :         string CalFluxTable::getVersion() const {
     593           0 :                 return version;
     594             :         }
     595             :         
     596             : 
     597           1 :         void CalFluxTable::fromXML(string& tableInXML)  {
     598             :                 //
     599             :                 // Look for a version information in the schemaVersion of the XML
     600             :                 //
     601             :                 xmlDoc *doc;
     602             : #if LIBXML_VERSION >= 20703
     603           1 :         doc = xmlReadMemory(tableInXML.data(), tableInXML.size(), "XMLTableHeader.xml", NULL, XML_PARSE_NOBLANKS|XML_PARSE_HUGE);
     604             : #else
     605             :                 doc = xmlReadMemory(tableInXML.data(), tableInXML.size(), "XMLTableHeader.xml", NULL, XML_PARSE_NOBLANKS);
     606             : #endif
     607           1 :                 if ( doc == NULL )
     608           0 :                         throw ConversionException("Failed to parse the xmlHeader into a DOM structure.", "CalFlux");
     609             :                 
     610           1 :                 xmlNode* root_element = xmlDocGetRootElement(doc);
     611           1 :                 if ( root_element == NULL || root_element->type != XML_ELEMENT_NODE )
     612           0 :                 throw ConversionException("Failed to retrieve the root element in the DOM structure.", "CalFlux");
     613             :                 
     614           1 :         xmlChar * propValue = xmlGetProp(root_element, (const xmlChar *) "schemaVersion");
     615           1 :         if ( propValue != 0 ) {
     616           1 :                 version = string( (const char*) propValue);
     617           1 :                 xmlFree(propValue);             
     618             :         }
     619             :                                                                         
     620           1 :                 Parser xml(tableInXML);
     621           1 :                 if (!xml.isStr("<CalFluxTable")) 
     622           0 :                         error();
     623             :                 // cout << "Parsing a CalFluxTable" << endl;
     624           2 :                 string s = xml.getElement("<Entity","/>");
     625           1 :                 if (s.length() == 0) 
     626           0 :                         error();
     627           1 :                 Entity e;
     628           1 :                 e.setFromXML(s);
     629           1 :                 if (e.getEntityTypeName() != "CalFluxTable")
     630           0 :                         error();
     631           1 :                 setEntity(e);
     632             :                 // Skip the container's entity; but, it has to be there.
     633           1 :                 s = xml.getElement("<ContainerEntity","/>");
     634           1 :                 if (s.length() == 0) 
     635           0 :                         error();
     636             : 
     637             :                 // Get each row in the table.
     638           1 :                 s = xml.getElementContent("<row>","</row>");
     639             :                 CalFluxRow *row;
     640           1 :                 if (getContainer().checkRowUniqueness()) {
     641             :                         try {
     642           0 :                                 while (s.length() != 0) {
     643           0 :                                         row = newRow();
     644           0 :                                         row->setFromXML(s);
     645           0 :                                         checkAndAdd(row);
     646           0 :                                         s = xml.getElementContent("<row>","</row>");
     647             :                                 }
     648             :                                 
     649             :                         }
     650           0 :                         catch (const DuplicateKey &e1) {
     651           0 :                                 throw ConversionException(e1.getMessage(),"CalFluxTable");
     652           0 :                         } 
     653           0 :                         catch (const UniquenessViolationException &e1) {
     654           0 :                                 throw ConversionException(e1.getMessage(),"CalFluxTable");    
     655           0 :                         }
     656           0 :                         catch (...) {
     657             :                                 // cout << "Unexpected error in CalFluxTable::checkAndAdd called from CalFluxTable::fromXML " << endl;
     658           0 :                         }
     659             :                 }
     660             :                 else {
     661             :                         try {
     662           2 :                                 while (s.length() != 0) {
     663           1 :                                         row = newRow();
     664           1 :                                         row->setFromXML(s);
     665           1 :                                         addWithoutCheckingUnique(row);
     666           1 :                                         s = xml.getElementContent("<row>","</row>");
     667             :                                 }
     668             :                         }
     669           0 :                         catch (const DuplicateKey &e1) {
     670           0 :                                 throw ConversionException(e1.getMessage(),"CalFluxTable");
     671           0 :                         } 
     672           0 :                         catch (...) {
     673             :                                 // cout << "Unexpected error in CalFluxTable::addWithoutCheckingUnique called from CalFluxTable::fromXML " << endl;
     674           0 :                         }
     675             :                 }                               
     676             :                                 
     677             :                                 
     678           1 :                 if (!xml.isStr("</CalFluxTable>")) 
     679           0 :                 error();
     680             :                 
     681             :                 //Does not change the convention defined in the model.  
     682             :                 //archiveAsBin = false;
     683             :                 //fileAsBin = false;
     684             : 
     685             :                 // clean up the xmlDoc pointer
     686           1 :                 if ( doc != NULL ) xmlFreeDoc(doc);
     687             :                 
     688           1 :         }
     689             : 
     690             :         
     691           0 :         void CalFluxTable::error()  {
     692           0 :                 throw ConversionException("Invalid xml document","CalFlux");
     693             :         }
     694             :         
     695             :         
     696           0 :         string CalFluxTable::MIMEXMLPart(const asdm::ByteOrder* byteOrder) {
     697           0 :                 string UID = getEntity().getEntityId().toString();
     698           0 :                 string withoutUID = UID.substr(6);
     699           0 :                 string containerUID = getContainer().getEntity().getEntityId().toString();
     700           0 :                 ostringstream oss;
     701           0 :                 oss << "<?xml version='1.0'  encoding='ISO-8859-1'?>";
     702           0 :                 oss << "\n";
     703           0 :                 oss << "<CalFluxTable xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xmlns:clflx=\"http://Alma/XASDM/CalFluxTable\" xsi:schemaLocation=\"http://Alma/XASDM/CalFluxTable http://almaobservatory.org/XML/XASDM/4/CalFluxTable.xsd\" schemaVersion=\"4\" schemaRevision=\"-1\">\n";
     704           0 :                 oss<< "<Entity entityId='"<<UID<<"' entityIdEncrypted='na' entityTypeName='CalFluxTable' schemaVersion='1' documentVersion='1'/>\n";
     705           0 :                 oss<< "<ContainerEntity entityId='"<<containerUID<<"' entityIdEncrypted='na' entityTypeName='ASDM' schemaVersion='1' documentVersion='1'/>\n";
     706           0 :                 oss << "<BulkStoreRef file_id='"<<withoutUID<<"' byteOrder='"<<byteOrder->toString()<<"' />\n";
     707           0 :                 oss << "<Attributes>\n";
     708             : 
     709           0 :                 oss << "<sourceName/>\n"; 
     710           0 :                 oss << "<calDataId/>\n"; 
     711           0 :                 oss << "<calReductionId/>\n"; 
     712           0 :                 oss << "<startValidTime/>\n"; 
     713           0 :                 oss << "<endValidTime/>\n"; 
     714           0 :                 oss << "<numFrequencyRanges/>\n"; 
     715           0 :                 oss << "<numStokes/>\n"; 
     716           0 :                 oss << "<frequencyRanges/>\n"; 
     717           0 :                 oss << "<fluxMethod/>\n"; 
     718           0 :                 oss << "<flux/>\n"; 
     719           0 :                 oss << "<fluxError/>\n"; 
     720           0 :                 oss << "<stokes/>\n"; 
     721             : 
     722           0 :                 oss << "<direction/>\n"; 
     723           0 :                 oss << "<directionCode/>\n"; 
     724           0 :                 oss << "<directionEquinox/>\n"; 
     725           0 :                 oss << "<PA/>\n"; 
     726           0 :                 oss << "<PAError/>\n"; 
     727           0 :                 oss << "<size/>\n"; 
     728           0 :                 oss << "<sizeError/>\n"; 
     729           0 :                 oss << "<sourceModel/>\n"; 
     730           0 :                 oss << "</Attributes>\n";         
     731           0 :                 oss << "</CalFluxTable>\n";
     732             : 
     733           0 :                 return oss.str();                               
     734           0 :         }
     735             :         
     736           0 :         string CalFluxTable::toMIME(const asdm::ByteOrder* byteOrder) {
     737           0 :                 EndianOSStream eoss(byteOrder);
     738             :                 
     739           0 :                 string UID = getEntity().getEntityId().toString();
     740             :                 
     741             :                 // The MIME Header
     742           0 :                 eoss <<"MIME-Version: 1.0";
     743           0 :                 eoss << "\n";
     744           0 :                 eoss << "Content-Type: Multipart/Related; boundary='MIME_boundary'; type='text/xml'; start= '<header.xml>'";
     745           0 :                 eoss <<"\n";
     746           0 :                 eoss <<"Content-Description: Correlator";
     747           0 :                 eoss <<"\n";
     748           0 :                 eoss <<"alma-uid:" << UID;
     749           0 :                 eoss <<"\n";
     750           0 :                 eoss <<"\n";            
     751             :                 
     752             :                 // The MIME XML part header.
     753           0 :                 eoss <<"--MIME_boundary";
     754           0 :                 eoss <<"\n";
     755           0 :                 eoss <<"Content-Type: text/xml; charset='ISO-8859-1'";
     756           0 :                 eoss <<"\n";
     757           0 :                 eoss <<"Content-Transfer-Encoding: 8bit";
     758           0 :                 eoss <<"\n";
     759           0 :                 eoss <<"Content-ID: <header.xml>";
     760           0 :                 eoss <<"\n";
     761           0 :                 eoss <<"\n";
     762             :                 
     763             :                 // The MIME XML part content.
     764           0 :                 eoss << MIMEXMLPart(byteOrder);
     765             : 
     766             :                 // The MIME binary part header
     767           0 :                 eoss <<"--MIME_boundary";
     768           0 :                 eoss <<"\n";
     769           0 :                 eoss <<"Content-Type: binary/octet-stream";
     770           0 :                 eoss <<"\n";
     771           0 :                 eoss <<"Content-ID: <content.bin>";
     772           0 :                 eoss <<"\n";
     773           0 :                 eoss <<"\n";    
     774             :                 
     775             :                 // The MIME binary content
     776           0 :                 entity.toBin(eoss);
     777           0 :                 container.getEntity().toBin(eoss);
     778           0 :                 eoss.writeInt((int) privateRows.size());
     779           0 :                 for (unsigned int i = 0; i < privateRows.size(); i++) {
     780           0 :                         privateRows.at(i)->toBin(eoss);      
     781             :                 }
     782             :                 
     783             :                 // The closing MIME boundary
     784           0 :                 eoss << "\n--MIME_boundary--";
     785           0 :                 eoss << "\n";
     786             :                 
     787           0 :                 return eoss.str();      
     788           0 :         }
     789             : 
     790             :         
     791           1 :         void CalFluxTable::setFromMIME(const string & mimeMsg) {
     792           1 :     string xmlPartMIMEHeader = "Content-ID: <header.xml>\n\n";
     793             :     
     794           1 :     string binPartMIMEHeader = "--MIME_boundary\nContent-Type: binary/octet-stream\nContent-ID: <content.bin>\n\n";
     795             :     
     796             :     // Detect the XML header.
     797           1 :     string::size_type loc0 = mimeMsg.find(xmlPartMIMEHeader, 0);
     798           1 :     if ( loc0 == string::npos) {
     799             :       // let's try with CRLFs
     800           0 :       xmlPartMIMEHeader = "Content-ID: <header.xml>\r\n\r\n";
     801           0 :       loc0 = mimeMsg.find(xmlPartMIMEHeader, 0);
     802           0 :       if  ( loc0 == string::npos ) 
     803           0 :               throw ConversionException("Failed to detect the beginning of the XML header", "CalFlux");
     804             :     }
     805             : 
     806           1 :     loc0 += xmlPartMIMEHeader.size();
     807             :     
     808             :     // Look for the string announcing the binary part.
     809           1 :     string::size_type loc1 = mimeMsg.find( binPartMIMEHeader, loc0 );
     810             :     
     811           1 :     if ( loc1 == string::npos ) {
     812           0 :       throw ConversionException("Failed to detect the beginning of the binary part", "CalFlux");
     813             :     }
     814             :     
     815             :     //
     816             :     // Extract the xmlHeader and analyze it to find out what is the byte order and the sequence
     817             :     // of attribute names.
     818             :     //
     819           1 :     string xmlHeader = mimeMsg.substr(loc0, loc1-loc0);
     820             :     xmlDoc *doc;
     821           1 :     doc = xmlReadMemory(xmlHeader.data(), xmlHeader.size(), "BinaryTableHeader.xml", NULL, XML_PARSE_NOBLANKS);
     822           1 :     if ( doc == NULL ) 
     823           0 :       throw ConversionException("Failed to parse the xmlHeader into a DOM structure.", "CalFlux");
     824             :     
     825             :    // This vector will be filled by the names of  all the attributes of the table
     826             :    // in the order in which they are expected to be found in the binary representation.
     827             :    //
     828           1 :     vector<string> attributesSeq;
     829             :       
     830           1 :     xmlNode* root_element = xmlDocGetRootElement(doc);
     831           1 :     if ( root_element == NULL || root_element->type != XML_ELEMENT_NODE )
     832           0 :       throw ConversionException("Failed to parse the xmlHeader into a DOM structure.", "CalFlux");
     833             :     
     834           1 :     const ByteOrder* byteOrder=0;
     835           1 :     if ( string("ASDMBinaryTable").compare((const char*) root_element->name) == 0) {
     836             :       // Then it's an "old fashioned" MIME file for tables.
     837             :       // Just try to deserialize it with Big_Endian for the bytes ordering.
     838           0 :       byteOrder = asdm::ByteOrder::Big_Endian;
     839             :       
     840             :          //
     841             :     // Let's consider a  default order for the sequence of attributes.
     842             :     //
     843             :     
     844             :          
     845           0 :     attributesSeq.push_back("sourceName") ; 
     846             :          
     847           0 :     attributesSeq.push_back("calDataId") ; 
     848             :          
     849           0 :     attributesSeq.push_back("calReductionId") ; 
     850             :          
     851           0 :     attributesSeq.push_back("startValidTime") ; 
     852             :          
     853           0 :     attributesSeq.push_back("endValidTime") ; 
     854             :          
     855           0 :     attributesSeq.push_back("numFrequencyRanges") ; 
     856             :          
     857           0 :     attributesSeq.push_back("numStokes") ; 
     858             :          
     859           0 :     attributesSeq.push_back("frequencyRanges") ; 
     860             :          
     861           0 :     attributesSeq.push_back("fluxMethod") ; 
     862             :          
     863           0 :     attributesSeq.push_back("flux") ; 
     864             :          
     865           0 :     attributesSeq.push_back("fluxError") ; 
     866             :          
     867           0 :     attributesSeq.push_back("stokes") ; 
     868             :         
     869             :          
     870           0 :     attributesSeq.push_back("direction") ; 
     871             :          
     872           0 :     attributesSeq.push_back("directionCode") ; 
     873             :          
     874           0 :     attributesSeq.push_back("directionEquinox") ; 
     875             :          
     876           0 :     attributesSeq.push_back("PA") ; 
     877             :          
     878           0 :     attributesSeq.push_back("PAError") ; 
     879             :          
     880           0 :     attributesSeq.push_back("size") ; 
     881             :          
     882           0 :     attributesSeq.push_back("sizeError") ; 
     883             :          
     884           0 :     attributesSeq.push_back("sourceModel") ; 
     885             :         
     886             :      
     887             :     
     888             :     
     889             :     // And decide that it has version == "2"
     890           0 :     version = "2";         
     891             :      }
     892           1 :     else if (string("CalFluxTable").compare((const char*) root_element->name) == 0) {
     893             :       // It's a new (and correct) MIME file for tables.
     894             :       //
     895             :       // 1st )  Look for a BulkStoreRef element with an attribute byteOrder.
     896             :       //
     897           1 :       xmlNode* bulkStoreRef = 0;
     898           1 :       xmlNode* child = root_element->children;
     899             :       
     900           1 :       if (xmlHasProp(root_element, (const xmlChar*) "schemaVersion")) {
     901           1 :         xmlChar * value = xmlGetProp(root_element, (const xmlChar *) "schemaVersion");
     902           1 :         version = string ((const char *) value);
     903           1 :         xmlFree(value); 
     904             :       }
     905             :       
     906             :       // Skip the two first children (Entity and ContainerEntity).
     907           1 :       bulkStoreRef = (child ==  0) ? 0 : ( (child->next) == 0 ? 0 : child->next->next );
     908             :       
     909           1 :       if ( bulkStoreRef == 0 || (bulkStoreRef->type != XML_ELEMENT_NODE)  || (string("BulkStoreRef").compare((const char*) bulkStoreRef->name) != 0))
     910           0 :         throw ConversionException ("Could not find the element '/CalFluxTable/BulkStoreRef'. Invalid XML header '"+ xmlHeader + "'.", "CalFlux");
     911             :         
     912             :       // We found BulkStoreRef, now look for its attribute byteOrder.
     913           1 :       _xmlAttr* byteOrderAttr = 0;
     914           2 :       for (struct _xmlAttr* attr = bulkStoreRef->properties; attr; attr = attr->next) 
     915           2 :           if (string("byteOrder").compare((const char*) attr->name) == 0) {
     916           1 :            byteOrderAttr = attr;
     917           1 :            break;
     918             :          }
     919             :       
     920           1 :       if (byteOrderAttr == 0) 
     921           0 :              throw ConversionException("Could not find the element '/CalFluxTable/BulkStoreRef/@byteOrder'. Invalid XML header '" + xmlHeader +"'.", "CalFlux");
     922             :       
     923           1 :       string byteOrderValue = string((const char*) byteOrderAttr->children->content);
     924           1 :       if (!(byteOrder = asdm::ByteOrder::fromString(byteOrderValue)))
     925           0 :                 throw ConversionException("No valid value retrieved for the element '/CalFluxTable/BulkStoreRef/@byteOrder'. Invalid XML header '" + xmlHeader + "'.", "CalFlux");
     926             :                 
     927             :          //
     928             :          // 2nd) Look for the Attributes element and grab the names of the elements it contains.
     929             :          //
     930           1 :          xmlNode* attributes = bulkStoreRef->next;
     931           1 :      if ( attributes == 0 || (attributes->type != XML_ELEMENT_NODE)  || (string("Attributes").compare((const char*) attributes->name) != 0))     
     932           0 :         throw ConversionException ("Could not find the element '/CalFluxTable/Attributes'. Invalid XML header '"+ xmlHeader + "'.", "CalFlux");
     933             :  
     934           1 :         xmlNode* childOfAttributes = attributes->children;
     935             :         
     936          21 :         while ( childOfAttributes != 0 && (childOfAttributes->type == XML_ELEMENT_NODE) ) {
     937          20 :                 attributesSeq.push_back(string((const char*) childOfAttributes->name));
     938          20 :                 childOfAttributes = childOfAttributes->next;
     939             :     }
     940           1 :     }
     941             :     // Create an EndianISStream from the substring containing the binary part.
     942           1 :     EndianISStream eiss(mimeMsg.substr(loc1+binPartMIMEHeader.size()), byteOrder);
     943             :     
     944           1 :     entity = Entity::fromBin((EndianIStream&) eiss);
     945             :     
     946             :     // We do nothing with that but we have to read it.
     947           1 :     Entity containerEntity = Entity::fromBin((EndianIStream&) eiss);
     948             : 
     949             :         // Let's read numRows but ignore it and rely on the value specified in the ASDM.xml file.    
     950           1 :     int numRows = ((EndianIStream&) eiss).readInt();
     951           1 :     if ((numRows != -1)                        // Then these are *not* data produced at the EVLA.
     952           1 :         && ((unsigned int) numRows != this->declaredSize )) { // Then the declared size (in ASDM.xml) is not equal to the one 
     953             :                                                // written into the binary representation of the table.
     954           0 :                 cout << "The a number of rows ('" 
     955             :                          << numRows
     956           0 :                          << "') declared in the binary representation of the table is different from the one declared in ASDM.xml ('"
     957           0 :                          << this->declaredSize
     958           0 :                          << "'). I'll proceed with the value declared in ASDM.xml"
     959           0 :                          << endl;
     960             :     }                                           
     961             : 
     962           1 :         if (getContainer().checkRowUniqueness()) {
     963             :         try {
     964           0 :                 for (uint32_t i = 0; i < this->declaredSize; i++) {
     965           0 :                                 CalFluxRow* aRow = CalFluxRow::fromBin((EndianIStream&) eiss, *this, attributesSeq);
     966           0 :                                 checkAndAdd(aRow);
     967             :                 }
     968             :         }
     969           0 :         catch (const DuplicateKey &e) {
     970           0 :                 throw ConversionException("Error while writing binary data , the message was "
     971           0 :                                 + e.getMessage(), "CalFlux");
     972           0 :         }
     973           0 :         catch (const TagFormatException &e) {
     974           0 :                  throw ConversionException("Error while reading binary data , the message was "
     975           0 :                                 + e.getMessage(), "CalFlux");
     976           0 :         }
     977             :     }
     978             :     else {
     979           2 :                 for (uint32_t i = 0; i < this->declaredSize; i++) {
     980           1 :                         CalFluxRow* aRow = CalFluxRow::fromBin((EndianIStream&) eiss, *this, attributesSeq);
     981           1 :                         append(aRow);
     982             :         }       
     983             :     }
     984             :     //Does not change the convention defined in the model.      
     985             :     //archiveAsBin = true;
     986             :     //fileAsBin = true;
     987           1 :     if ( doc != NULL ) xmlFreeDoc(doc);
     988             : 
     989           1 :         }
     990             :         
     991           0 :         void CalFluxTable::setUnknownAttributeBinaryReader(const string& attributeName, BinaryAttributeReaderFunctor* barFctr) {
     992             :                 //
     993             :                 // Is this attribute really unknown ?
     994             :                 //
     995           0 :                 for (vector<string>::const_iterator iter = attributesNamesOfCalFlux_v.begin(); iter != attributesNamesOfCalFlux_v.end(); iter++) {
     996           0 :                         if ((*iter).compare(attributeName) == 0) 
     997           0 :                                 throw ConversionException("the attribute '"+attributeName+"' is known you can't override the way it's read in the MIME binary file containing the table.", "CalFlux"); 
     998             :                 }
     999             :                 
    1000             :                 // Ok then register the functor to activate when an unknown attribute is met during the reading of a binary table?
    1001           0 :                 unknownAttributes2Functors[attributeName] = barFctr;
    1002           0 :         }
    1003             :         
    1004           0 :         BinaryAttributeReaderFunctor* CalFluxTable::getUnknownAttributeBinaryReader(const string& attributeName) const {
    1005           0 :                 map<string, BinaryAttributeReaderFunctor*>::const_iterator iter = unknownAttributes2Functors.find(attributeName);
    1006           0 :                 return (iter == unknownAttributes2Functors.end()) ? 0 : iter->second;
    1007             :         }
    1008             : 
    1009             :         
    1010           0 :         void CalFluxTable::toFile(string directory) {
    1011           0 :                 if (!directoryExists(directory.c_str()) &&
    1012           0 :                         !createPath(directory.c_str())) {
    1013           0 :                         throw ConversionException("Could not create directory " , directory);
    1014             :                 }
    1015             : 
    1016           0 :                 string fileName = directory + "/CalFlux.xml";
    1017           0 :                 ofstream tableout(fileName.c_str(),ios::out|ios::trunc);
    1018           0 :                 if (tableout.rdstate() == ostream::failbit)
    1019           0 :                         throw ConversionException("Could not open file " + fileName + " to write ", "CalFlux");
    1020           0 :                 if (fileAsBin) 
    1021           0 :                         tableout << MIMEXMLPart();
    1022             :                 else
    1023           0 :                         tableout << toXML() << endl;
    1024           0 :                 tableout.close();
    1025           0 :                 if (tableout.rdstate() == ostream::failbit)
    1026           0 :                         throw ConversionException("Could not close file " + fileName, "CalFlux");
    1027             : 
    1028           0 :                 if (fileAsBin) {
    1029             :                         // write the bin serialized
    1030           0 :                         string fileName = directory + "/CalFlux.bin";
    1031           0 :                         ofstream tableout(fileName.c_str(),ios::out|ios::trunc);
    1032           0 :                         if (tableout.rdstate() == ostream::failbit)
    1033           0 :                                 throw ConversionException("Could not open file " + fileName + " to write ", "CalFlux");
    1034           0 :                         tableout << toMIME() << endl;
    1035           0 :                         tableout.close();
    1036           0 :                         if (tableout.rdstate() == ostream::failbit)
    1037           0 :                                 throw ConversionException("Could not close file " + fileName, "CalFlux");
    1038           0 :                 }
    1039           0 :         }
    1040             : 
    1041             :         
    1042           2 :         void CalFluxTable::setFromFile(const string& directory) {
    1043             : #ifndef WITHOUT_BOOST
    1044             :     if (boost::filesystem::exists(boost::filesystem::path(uniqSlashes(directory + "/CalFlux.xml"))))
    1045             :       setFromXMLFile(directory);
    1046             :     else if (boost::filesystem::exists(boost::filesystem::path(uniqSlashes(directory + "/CalFlux.bin"))))
    1047             :       setFromMIMEFile(directory);
    1048             : #else 
    1049             :     // alternative in Misc.h
    1050           2 :     if (file_exists(uniqSlashes(directory + "/CalFlux.xml")))
    1051           2 :       setFromXMLFile(directory);
    1052           0 :     else if (file_exists(uniqSlashes(directory + "/CalFlux.bin")))
    1053           0 :       setFromMIMEFile(directory);
    1054             : #endif
    1055             :     else
    1056           0 :       throw ConversionException("No file found for the CalFlux table", "CalFlux");
    1057           2 :         }                       
    1058             : 
    1059             :         
    1060           1 :   void CalFluxTable::setFromMIMEFile(const string& directory) {
    1061           1 :     string tablePath ;
    1062             :     
    1063           1 :     tablePath = directory + "/CalFlux.bin";
    1064           1 :     ifstream tablefile(tablePath.c_str(), ios::in|ios::binary);
    1065           1 :     if (!tablefile.is_open()) { 
    1066           0 :       throw ConversionException("Could not open file " + tablePath, "CalFlux");
    1067             :     }
    1068             :     // Read in a stringstream.
    1069           1 :     stringstream ss; ss << tablefile.rdbuf();
    1070             :     
    1071           1 :     if (tablefile.rdstate() == istream::failbit || tablefile.rdstate() == istream::badbit) {
    1072           0 :       throw ConversionException("Error reading file " + tablePath,"CalFlux");
    1073             :     }
    1074             :     
    1075             :     // And close.
    1076           1 :     tablefile.close();
    1077           1 :     if (tablefile.rdstate() == istream::failbit)
    1078           0 :       throw ConversionException("Could not close file " + tablePath,"CalFlux");
    1079             :     
    1080           1 :     setFromMIME(ss.str());
    1081           1 :   }     
    1082             : /* 
    1083             :   void CalFluxTable::openMIMEFile (const string& directory) {
    1084             :                 
    1085             :         // Open the file.
    1086             :         string tablePath ;
    1087             :     tablePath = directory + "/CalFlux.bin";
    1088             :     ifstream tablefile(tablePath.c_str(), ios::in|ios::binary);
    1089             :     if (!tablefile.is_open())
    1090             :       throw ConversionException("Could not open file " + tablePath, "CalFlux");
    1091             :       
    1092             :         // Locate the xmlPartMIMEHeader.
    1093             :     string xmlPartMIMEHeader = "CONTENT-ID: <HEADER.XML>\n\n";
    1094             :     CharComparator comparator;
    1095             :     istreambuf_iterator<char> BEGIN(tablefile.rdbuf());
    1096             :     istreambuf_iterator<char> END;
    1097             :     istreambuf_iterator<char> it = search(BEGIN, END, xmlPartMIMEHeader.begin(), xmlPartMIMEHeader.end(), comparator);
    1098             :     if (it == END) 
    1099             :         throw ConversionException("failed to detect the beginning of the XML header", "CalFlux");
    1100             :     
    1101             :     // Locate the binaryPartMIMEHeader while accumulating the characters of the xml header.     
    1102             :     string binPartMIMEHeader = "--MIME_BOUNDARY\nCONTENT-TYPE: BINARY/OCTET-STREAM\nCONTENT-ID: <CONTENT.BIN>\n\n";
    1103             :     string xmlHeader;
    1104             :         CharCompAccumulator compaccumulator(&xmlHeader, 100000);
    1105             :         ++it;
    1106             :         it = search(it, END, binPartMIMEHeader.begin(), binPartMIMEHeader.end(), compaccumulator);
    1107             :         if (it == END) 
    1108             :                 throw ConversionException("failed to detect the beginning of the binary part", "CalFlux");
    1109             :         
    1110             :         cout << xmlHeader << endl;
    1111             :         //
    1112             :         // We have the xmlHeader , let's parse it.
    1113             :         //
    1114             :         xmlDoc *doc;
    1115             :     doc = xmlReadMemory(xmlHeader.data(), xmlHeader.size(), "BinaryTableHeader.xml", NULL, XML_PARSE_NOBLANKS);
    1116             :     if ( doc == NULL ) 
    1117             :       throw ConversionException("Failed to parse the xmlHeader into a DOM structure.", "CalFlux");
    1118             :     
    1119             :    // This vector will be filled by the names of  all the attributes of the table
    1120             :    // in the order in which they are expected to be found in the binary representation.
    1121             :    //
    1122             :     vector<string> attributesSeq(attributesNamesInBinOfCalFlux_v);
    1123             :       
    1124             :     xmlNode* root_element = xmlDocGetRootElement(doc);
    1125             :     if ( root_element == NULL || root_element->type != XML_ELEMENT_NODE )
    1126             :       throw ConversionException("Failed to parse the xmlHeader into a DOM structure.", "CalFlux");
    1127             :     
    1128             :     const ByteOrder* byteOrder=0;
    1129             :     if ( string("ASDMBinaryTable").compare((const char*) root_element->name) == 0) {
    1130             :       // Then it's an "old fashioned" MIME file for tables.
    1131             :       // Just try to deserialize it with Big_Endian for the bytes ordering.
    1132             :       byteOrder = asdm::ByteOrder::Big_Endian;
    1133             :         
    1134             :       // And decide that it has version == "2"
    1135             :     version = "2";         
    1136             :      }
    1137             :     else if (string("CalFluxTable").compare((const char*) root_element->name) == 0) {
    1138             :       // It's a new (and correct) MIME file for tables.
    1139             :       //
    1140             :       // 1st )  Look for a BulkStoreRef element with an attribute byteOrder.
    1141             :       //
    1142             :       xmlNode* bulkStoreRef = 0;
    1143             :       xmlNode* child = root_element->children;
    1144             :       
    1145             :       if (xmlHasProp(root_element, (const xmlChar*) "schemaVersion")) {
    1146             :         xmlChar * value = xmlGetProp(root_element, (const xmlChar *) "schemaVersion");
    1147             :         version = string ((const char *) value);
    1148             :         xmlFree(value); 
    1149             :       }
    1150             :       
    1151             :       // Skip the two first children (Entity and ContainerEntity).
    1152             :       bulkStoreRef = (child ==  0) ? 0 : ( (child->next) == 0 ? 0 : child->next->next );
    1153             :       
    1154             :       if ( bulkStoreRef == 0 || (bulkStoreRef->type != XML_ELEMENT_NODE)  || (string("BulkStoreRef").compare((const char*) bulkStoreRef->name) != 0))
    1155             :         throw ConversionException ("Could not find the element '/CalFluxTable/BulkStoreRef'. Invalid XML header '"+ xmlHeader + "'.", "CalFlux");
    1156             :         
    1157             :       // We found BulkStoreRef, now look for its attribute byteOrder.
    1158             :       _xmlAttr* byteOrderAttr = 0;
    1159             :       for (struct _xmlAttr* attr = bulkStoreRef->properties; attr; attr = attr->next) 
    1160             :           if (string("byteOrder").compare((const char*) attr->name) == 0) {
    1161             :            byteOrderAttr = attr;
    1162             :            break;
    1163             :          }
    1164             :       
    1165             :       if (byteOrderAttr == 0) 
    1166             :              throw ConversionException("Could not find the element '/CalFluxTable/BulkStoreRef/@byteOrder'. Invalid XML header '" + xmlHeader +"'.", "CalFlux");
    1167             :       
    1168             :       string byteOrderValue = string((const char*) byteOrderAttr->children->content);
    1169             :       if (!(byteOrder = asdm::ByteOrder::fromString(byteOrderValue)))
    1170             :                 throw ConversionException("No valid value retrieved for the element '/CalFluxTable/BulkStoreRef/@byteOrder'. Invalid XML header '" + xmlHeader + "'.", "CalFlux");
    1171             :                 
    1172             :          //
    1173             :          // 2nd) Look for the Attributes element and grab the names of the elements it contains.
    1174             :          //
    1175             :          xmlNode* attributes = bulkStoreRef->next;
    1176             :      if ( attributes == 0 || (attributes->type != XML_ELEMENT_NODE)  || (string("Attributes").compare((const char*) attributes->name) != 0))     
    1177             :         throw ConversionException ("Could not find the element '/CalFluxTable/Attributes'. Invalid XML header '"+ xmlHeader + "'.", "CalFlux");
    1178             :  
    1179             :         xmlNode* childOfAttributes = attributes->children;
    1180             :         
    1181             :         while ( childOfAttributes != 0 && (childOfAttributes->type == XML_ELEMENT_NODE) ) {
    1182             :                 attributesSeq.push_back(string((const char*) childOfAttributes->name));
    1183             :                 childOfAttributes = childOfAttributes->next;
    1184             :     }
    1185             :     }
    1186             :     // Create an EndianISStream from the substring containing the binary part.
    1187             :     EndianIFStream eifs(&tablefile, byteOrder);
    1188             :     
    1189             :     entity = Entity::fromBin((EndianIStream &) eifs);
    1190             :     
    1191             :     // We do nothing with that but we have to read it.
    1192             :     Entity containerEntity = Entity::fromBin((EndianIStream &) eifs);
    1193             : 
    1194             :         // Let's read numRows but ignore it and rely on the value specified in the ASDM.xml file.    
    1195             :     int numRows = eifs.readInt();
    1196             :     if ((numRows != -1)                        // Then these are *not* data produced at the EVLA.
    1197             :         && ((unsigned int) numRows != this->declaredSize )) { // Then the declared size (in ASDM.xml) is not equal to the one 
    1198             :                                                // written into the binary representation of the table.
    1199             :                 cout << "The a number of rows ('" 
    1200             :                          << numRows
    1201             :                          << "') declared in the binary representation of the table is different from the one declared in ASDM.xml ('"
    1202             :                          << this->declaredSize
    1203             :                          << "'). I'll proceed with the value declared in ASDM.xml"
    1204             :                          << endl;
    1205             :     }
    1206             :     // clean up xmlDoc pointer
    1207             :     if ( doc != NULL ) xmlFreeDoc(doc);    
    1208             :   } 
    1209             :  */
    1210             : 
    1211             :         
    1212           2 : void CalFluxTable::setFromXMLFile(const string& directory) {
    1213           2 :     string tablePath ;
    1214             :     
    1215           2 :     tablePath = directory + "/CalFlux.xml";
    1216             :     
    1217             :     /*
    1218             :     ifstream tablefile(tablePath.c_str(), ios::in|ios::binary);
    1219             :     if (!tablefile.is_open()) { 
    1220             :       throw ConversionException("Could not open file " + tablePath, "CalFlux");
    1221             :     }
    1222             :       // Read in a stringstream.
    1223             :     stringstream ss;
    1224             :     ss << tablefile.rdbuf();
    1225             :     
    1226             :     if  (tablefile.rdstate() == istream::failbit || tablefile.rdstate() == istream::badbit) {
    1227             :       throw ConversionException("Error reading file '" + tablePath + "'", "CalFlux");
    1228             :     }
    1229             :     
    1230             :     // And close
    1231             :     tablefile.close();
    1232             :     if (tablefile.rdstate() == istream::failbit)
    1233             :       throw ConversionException("Could not close file '" + tablePath + "'", "CalFlux");
    1234             : 
    1235             :     // Let's make a string out of the stringstream content and empty the stringstream.
    1236             :     string xmlDocument = ss.str(); ss.str("");
    1237             :         
    1238             :     // Let's make a very primitive check to decide
    1239             :     // whether the XML content represents the table
    1240             :     // or refers to it via a <BulkStoreRef element.
    1241             :     */
    1242             :     
    1243           2 :     string xmlDocument;
    1244             :     try {
    1245           2 :         xmlDocument = getContainer().getXSLTransformer()(tablePath);
    1246           2 :         if (getenv("ASDM_DEBUG")) cout << "About to read " << tablePath << endl;
    1247             :     }
    1248           0 :     catch (const XSLTransformerException &e) {
    1249           0 :         throw ConversionException("Caugth an exception whose message is '" + e.getMessage() + "'.", "CalFlux");
    1250           0 :     }
    1251             :     
    1252           2 :     if (xmlDocument.find("<BulkStoreRef") != string::npos)
    1253           1 :       setFromMIMEFile(directory);
    1254             :     else
    1255           1 :       fromXML(xmlDocument);
    1256           2 :   }
    1257             : 
    1258             :         
    1259             : 
    1260             :         
    1261             : 
    1262             :                         
    1263             :         
    1264             :         
    1265             : 
    1266             :         
    1267             : } // End namespace asdm
    1268             :  

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