LCOV - code coverage report
Current view: top level - synthesis/TransformMachines - GridFT.cc (source / functions) Hit Total Coverage
Test: casacpp_coverage.info Lines: 210 610 34.4 %
Date: 2024-10-29 13:38:20 Functions: 7 28 25.0 %

          Line data    Source code
       1             : //# GridFT.cc: Implementation of GridFT class
       2             : //# Copyright (C) 1997-2014
       3             : //# Associated Universities, Inc. Washington DC, USA.
       4             : //#
       5             : //# This library is free software; you can redistribute it and/or modify it
       6             : //# under the terms of the GNU Library General Public License as published by
       7             : //# the Free Software Foundation; either version 2 of the License, or (at your
       8             : //# option) any later version.
       9             : //#
      10             : //# This library is distributed in the hope that it will be useful, but WITHOUT
      11             : //# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
      12             : //# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
      13             : //# License for more details.
      14             : //#
      15             : //# You should have received a copy of the GNU Library General Public License
      16             : //# along with this library; if not, write to the Free Software Foundation,
      17             : //# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
      18             : //#
      19             : //# Correspondence concerning AIPS++ should be addressed as follows:
      20             : //#        Internet email: casa-feedback@nrao.edu.
      21             : //#        Postal address: AIPS++ Project Office
      22             : //#                        National Radio Astronomy Observatory
      23             : //#                        520 Edgemont Road
      24             : //#                        Charlottesville, VA 22903-2475 USA
      25             : //#
      26             : //# $Id$
      27             : 
      28             : #include <msvis/MSVis/VisibilityIterator.h>
      29             : #include <casacore/casa/Quanta/UnitMap.h>
      30             : #include <casacore/casa/Quanta/UnitVal.h>
      31             : #include <casacore/measures/Measures/Stokes.h>
      32             : #include <casacore/coordinates/Coordinates/CoordinateSystem.h>
      33             : #include <casacore/coordinates/Coordinates/DirectionCoordinate.h>
      34             : #include <casacore/coordinates/Coordinates/SpectralCoordinate.h>
      35             : #include <casacore/coordinates/Coordinates/StokesCoordinate.h>
      36             : #include <casacore/coordinates/Coordinates/Projection.h>
      37             : #include <casacore/ms/MeasurementSets/MSColumns.h>
      38             : #include <casacore/casa/BasicSL/Constants.h>
      39             : #include <casacore/scimath/Mathematics/FFTServer.h>
      40             : #include <synthesis/TransformMachines/GridFT.h>
      41             : #include <casacore/scimath/Mathematics/RigidVector.h>
      42             : #include <msvis/MSVis/StokesVector.h>
      43             : #include <synthesis/TransformMachines/StokesImageUtil.h>
      44             : #include <synthesis/TransformMachines/Utils.h>
      45             : #include <msvis/MSVis/VisBuffer.h>
      46             : #include <msvis/MSVis/VisSet.h>
      47             : #include <casacore/images/Images/ImageInterface.h>
      48             : #include <casacore/images/Images/PagedImage.h>
      49             : #include <casacore/casa/Containers/Block.h>
      50             : #include <casacore/casa/Containers/Record.h>
      51             : #include <casacore/casa/Arrays/ArrayLogical.h>
      52             : #include <casacore/casa/Arrays/ArrayMath.h>
      53             : #include <casacore/casa/Arrays/Array.h>
      54             : #include <casacore/casa/Arrays/MaskedArray.h>
      55             : #include <casacore/casa/Arrays/Vector.h>
      56             : #include <casacore/casa/Arrays/Matrix.h>
      57             : #include <casacore/casa/Arrays/Cube.h>
      58             : #include <casacore/casa/Arrays/MatrixIter.h>
      59             : #include <casacore/casa/BasicSL/String.h>
      60             : #include <casacore/casa/Utilities/Assert.h>
      61             : #include <casacore/casa/Exceptions/Error.h>
      62             : #include <casacore/lattices/Lattices/ArrayLattice.h>
      63             : #include <casacore/measures/Measures/UVWMachine.h>
      64             : #include <casacore/lattices/Lattices/SubLattice.h>
      65             : #include <casacore/lattices/LRegions/LCBox.h>
      66             : #include <casacore/lattices/Lattices/LatticeCache.h>
      67             : #include <casacore/lattices/LatticeMath/LatticeFFT.h>
      68             : #include <casacore/lattices/Lattices/LatticeIterator.h>
      69             : #include <casacore/lattices/Lattices/LatticeStepper.h>
      70             : #include <casacore/scimath/Mathematics/ConvolveGridder.h>
      71             : #include <casacore/casa/Utilities/CompositeNumber.h>
      72             : #include <casacore/casa/OS/Timer.h>
      73             : #include <sstream>
      74             : #ifdef _OPENMP
      75             : #include <omp.h>
      76             : #endif
      77             : 
      78             : using namespace casacore;
      79             : namespace casa { //# NAMESPACE CASA - BEGIN
      80             : using namespace casacore;
      81             :   //  using namespace casa::async;
      82           0 :   GridFT::GridFT() : FTMachine(), padding_p(1.0), imageCache(0), cachesize(1000000), tilesize(1000), gridder(0), isTiled(false), convType("SF"),
      83           0 :   maxAbsData(0.0), centerLoc(IPosition(4,0)), offsetLoc(IPosition(4,0)),
      84           0 :   usezero_p(false), noPadding_p(false), usePut2_p(false), 
      85           0 :                      machineName_p("GridFT"), timemass_p(0.0), timegrid_p(0.0),  convFunc_p(0), convSampling_p(1), convSupport_p(0) {
      86             : 
      87           0 :   }
      88           0 : GridFT::GridFT(Long icachesize, Int itilesize, String iconvType, Float padding,
      89           0 :                Bool usezero, Bool useDoublePrec)
      90           0 : : FTMachine(), padding_p(padding), imageCache(0), cachesize(icachesize), tilesize(itilesize),
      91           0 :   gridder(0), isTiled(false), convType(iconvType),
      92           0 :   maxAbsData(0.0), centerLoc(IPosition(4,0)), offsetLoc(IPosition(4,0)),
      93           0 :   usezero_p(usezero), noPadding_p(false), usePut2_p(false), 
      94           0 :   machineName_p("GridFT"), timemass_p(0.0), timegrid_p(0.0),  convFunc_p(0), convSampling_p(1), convSupport_p(0) 
      95             : {
      96           0 :   useDoubleGrid_p=useDoublePrec;  
      97             :   //  peek=NULL;
      98           0 : }
      99             : 
     100           1 : GridFT::GridFT(Long icachesize, Int itilesize, String iconvType,
     101           1 :                MPosition mLocation, Float padding, Bool usezero, Bool useDoublePrec)
     102           1 : : FTMachine(), padding_p(padding), imageCache(0), cachesize(icachesize),
     103           1 :   tilesize(itilesize), gridder(0), isTiled(false), convType(iconvType), maxAbsData(0.0), centerLoc(IPosition(4,0)),
     104           1 :   offsetLoc(IPosition(4,0)), usezero_p(usezero), noPadding_p(false), 
     105           2 :   usePut2_p(false), machineName_p("GridFT"), timemass_p(0.0), timegrid_p(0.0),  convFunc_p(0), convSampling_p(1), convSupport_p(0) 
     106             : {
     107           1 :   mLocation_p=mLocation;
     108           1 :   tangentSpecified_p=false;
     109           1 :   useDoubleGrid_p=useDoublePrec;
     110             :   //  peek=NULL;
     111           1 : }
     112             : 
     113           0 : GridFT::GridFT(Long icachesize, Int itilesize, String iconvType,
     114           0 :                MDirection mTangent, Float padding, Bool usezero, Bool useDoublePrec)
     115           0 : : FTMachine(), padding_p(padding), imageCache(0), cachesize(icachesize),
     116           0 :   tilesize(itilesize), gridder(0), isTiled(false), convType(iconvType), maxAbsData(0.0), centerLoc(IPosition(4,0)),
     117           0 :   offsetLoc(IPosition(4,0)), usezero_p(usezero), noPadding_p(false), 
     118           0 :   usePut2_p(false), machineName_p("GridFT"), timemass_p(0.0), timegrid_p(0.0), convFunc_p(0), convSampling_p(1), convSupport_p(0)
     119             : {
     120           0 :   mTangent_p=mTangent;
     121           0 :   tangentSpecified_p=true;
     122           0 :   useDoubleGrid_p=useDoublePrec;
     123             :   //  peek=NULL;
     124           0 : }
     125             : 
     126           0 : GridFT::GridFT(Long icachesize, Int itilesize, String iconvType,
     127             :                MPosition mLocation, MDirection mTangent, Float padding,
     128           0 :                Bool usezero, Bool useDoublePrec)
     129           0 : : FTMachine(), padding_p(padding), imageCache(0), cachesize(icachesize),
     130           0 :   tilesize(itilesize), gridder(0), isTiled(false), convType(iconvType), maxAbsData(0.0), centerLoc(IPosition(4,0)),
     131           0 :   offsetLoc(IPosition(4,0)), usezero_p(usezero), noPadding_p(false), 
     132           0 :   usePut2_p(false),machineName_p("GridFT"), timemass_p(0.0), timegrid_p(0.0),  convFunc_p(0), convSampling_p(1), convSupport_p(0) 
     133             : {
     134           0 :   mLocation_p=mLocation;
     135           0 :   mTangent_p=mTangent;
     136           0 :   tangentSpecified_p=true;
     137           0 :   useDoubleGrid_p=useDoublePrec;
     138             :   //  peek=NULL;
     139           0 : }
     140             : 
     141           0 : GridFT::GridFT(const RecordInterface& stateRec)
     142           0 : : FTMachine()
     143             : {
     144             :   // Construct from the input state record
     145           0 :   String error;
     146           0 :   if (!fromRecord(error, stateRec)) {
     147           0 :     throw (AipsError("Failed to create gridder: " + error));
     148             :   };
     149           0 :   timemass_p=0.0;
     150           0 :   timegrid_p=0.0;
     151           0 :   timedegrid_p=0.0;
     152             :   //  peek=NULL;
     153           0 : }
     154             : 
     155             : //---------------------------------------------------------------------- 
     156           0 : GridFT& GridFT::operator=(const GridFT& other)
     157             : {
     158           0 :   if(this!=&other) {
     159             :     //Do the base parameters
     160           0 :     FTMachine::operator=(other);
     161             :     
     162             :     //private params
     163           0 :     imageCache=other.imageCache;
     164           0 :     cachesize=other.cachesize;
     165           0 :     tilesize=other.tilesize;
     166           0 :     convType=other.convType;
     167           0 :     convType.upcase();
     168           0 :     uvScale.resize();
     169           0 :     uvOffset.resize();
     170           0 :     uvScale.assign(other.uvScale);
     171           0 :     uvOffset.assign(other.uvOffset);
     172           0 :     if(other.gridder==0)
     173           0 :       gridder=0;
     174             :     else{  
     175           0 :       gridder = new ConvolveGridder<Double, Complex>(IPosition(2, nx, ny),
     176           0 :                                                      uvScale, uvOffset,
     177           0 :                                                      convType);
     178             :     }
     179           0 :     convFunc_p.resize();
     180           0 :     convSupport_p=other.convSupport_p;
     181           0 :     convSampling_p=other.convSampling_p;
     182           0 :     convFunc_p=other.convFunc_p;
     183           0 :     isTiled=other.isTiled;
     184             :     //lattice=other.lattice;
     185           0 :     lattice=0;
     186           0 :     tilesize=other.tilesize;
     187           0 :     arrayLattice=0;
     188           0 :     maxAbsData=other.maxAbsData;
     189           0 :     centerLoc=other.centerLoc;
     190           0 :     offsetLoc=other.offsetLoc;
     191           0 :     padding_p=other.padding_p;
     192           0 :     usezero_p=other.usezero_p;
     193           0 :     noPadding_p=other.noPadding_p;      
     194           0 :     machineName_p="GridFT";
     195           0 :     timemass_p=0.0;
     196           0 :     timegrid_p=0.0;
     197             :     //    peek = other.peek;
     198             :   };
     199           0 :   return *this;
     200             : };
     201             : 
     202             : //----------------------------------------------------------------------
     203           0 : GridFT::GridFT(const GridFT& other) : FTMachine(), machineName_p("GridFT")
     204             : {
     205           0 :   operator=(other);
     206           0 : }
     207             : 
     208             : //-----------------------------------------------------------------------
     209           0 :   FTMachine* GridFT::cloneFTM(){
     210           0 :     return new GridFT(*this);
     211             :   }
     212             : 
     213             : //----------------------------------------------------------------------
     214           1 : void GridFT::init() {
     215             : 
     216           1 :   logIO() << LogOrigin("GridFT", "init")  << LogIO::NORMAL;
     217             : 
     218           1 :   ok();
     219             :   // if (peek == NULL) 
     220             :   //   {
     221             :   //     // peek = new SynthesisAsyncPeek();
     222             :   //     // peek->reset();
     223             :   //     // peek->startThread();
     224             :   //   }
     225             : 
     226             :   /* hardwiring isTiled is false
     227             :   // Padding is possible only for non-tiled processing
     228             :   if((padding_p*padding_p*image->shape().product())>cachesize) {
     229             :     isTiled=true;
     230             :     nx    = image->shape()(0);
     231             :     ny    = image->shape()(1);
     232             :     npol  = image->shape()(2);
     233             :     nchan = image->shape()(3);
     234             :   }
     235             :   else {
     236             :   */
     237             :     // We are padding.
     238           1 :     isTiled=false;
     239           1 :     if(!noPadding_p){
     240           1 :       CompositeNumber cn(uInt(image->shape()(0)*2));    
     241           1 :       nx    = cn.nextLargerEven(Int(padding_p*Float(image->shape()(0))-0.5));
     242           1 :       ny    = cn.nextLargerEven(Int(padding_p*Float(image->shape()(1))-0.5));
     243           1 :     }
     244             :     else{
     245           0 :       nx    = image->shape()(0);
     246           0 :       ny    = image->shape()(1);
     247             :     }
     248           1 :     npol  = image->shape()(2);
     249           1 :     nchan = image->shape()(3);
     250             :     // }
     251             : 
     252           1 :   sumWeight.resize(npol, nchan);
     253             : 
     254           1 :   uvScale.resize(2);
     255           1 :   uvScale(0)=(Float(nx)*image->coordinates().increment()(0)); 
     256           1 :   uvScale(1)=(Float(ny)*image->coordinates().increment()(1)); 
     257           1 :   uvOffset.resize(2);
     258           1 :   uvOffset(0)=nx/2;
     259           1 :   uvOffset(1)=ny/2;
     260             : 
     261             :   // Now set up the gridder. The possibilities are BOX and SF
     262           1 :   if(gridder) delete gridder; gridder=0;
     263           1 :   convType.upcase();
     264           2 :   gridder = new ConvolveGridder<Double, Complex>(IPosition(2, nx, ny),
     265           1 :                                                  uvScale, uvOffset,
     266           1 :                                                  convType);
     267             : 
     268             :   
     269           1 :   convFunc_p.resize();
     270           1 :   convSupport_p=gridder->cSupport()(0);
     271           1 :   convSampling_p=gridder->cSampling();
     272           1 :   convFunc_p=gridder->cFunction();
     273             :   // Set up image cache needed for gridding. For BOX-car convolution
     274             :   // we can use non-overlapped tiles. Otherwise we need to use
     275             :   // overlapped tiles and additive gridding so that only increments
     276             :   // to a tile are written.
     277           1 :   if(imageCache) delete imageCache; imageCache=0;
     278             : 
     279           1 :   if(isTiled) {
     280           0 :     Float tileOverlap=0.5;
     281           0 :     if(convType=="BOX") {
     282           0 :       tileOverlap=0.0;
     283             :     }
     284             :     else {
     285           0 :       tileOverlap=0.5;
     286           0 :       tilesize=max(12,tilesize);
     287             :     }
     288           0 :     IPosition tileShape=IPosition(4,tilesize,tilesize,npol,nchan);
     289           0 :     Vector<Float> tileOverlapVec(4);
     290           0 :     tileOverlapVec=0.0;
     291           0 :     tileOverlapVec(0)=tileOverlap;
     292           0 :     tileOverlapVec(1)=tileOverlap;
     293           0 :     Int tmpCacheVal=static_cast<Int>(cachesize);
     294           0 :     imageCache=new LatticeCache <Complex> (*image, tmpCacheVal, tileShape, 
     295             :                                            tileOverlapVec,
     296           0 :                                            (tileOverlap>0.0));
     297             : 
     298           0 :   }
     299           1 : }
     300             : 
     301             : // This is nasty, we should use CountedPointers here.
     302           0 : GridFT::~GridFT() {
     303           0 :   if(imageCache) delete imageCache; imageCache=0;
     304             :   //if(arrayLattice) delete arrayLattice; arrayLattice=0;
     305           0 :   if(gridder) delete gridder; gridder=0;
     306           0 : }
     307             : 
     308             : // Initialize for a transform from the Sky domain. This means that
     309             : // we grid-correct, and FFT the image
     310             : 
     311           0 : void GridFT::initializeToVis(ImageInterface<Complex>& iimage,
     312             :                              const VisBuffer& vb)
     313             : {
     314           0 :   image=&iimage;
     315           0 :   toVis_p=true;
     316             : 
     317           0 :   ok();
     318             : 
     319           0 :   init();
     320             :   //  peek->reset();
     321             :   // Initialize the maps for polarization and channel. These maps
     322             :   // translate visibility indices into image indices
     323           0 :   initMaps(vb);
     324             : 
     325             :   // Need to reset nx, ny for padding
     326             :   // Padding is possible only for non-tiled processing
     327             :   
     328             : 
     329             :   //cerr << "initialize to vis nx" << nx << "   " << ny <<  "  " << npol << " " << nchan << endl;
     330             : 
     331             :   //cerr << "image shape " << image->shape() << endl;
     332             : 
     333             :   // If we are memory-based then read the image in and create an
     334             :   // ArrayLattice otherwise just use the PagedImage
     335             :   /*if(isTiled) {
     336             :     lattice=CountedPtr<Lattice<Complex> >(image, false);
     337             :   }
     338             :   else {
     339             :      
     340             :   }*/
     341           0 :   prepGridForDegrid();
     342             : 
     343             :   //AlwaysAssert(lattice, AipsError);
     344             : 
     345             :  
     346             :     
     347           0 : }
     348             : 
     349           0 : void GridFT::prepGridForDegrid(){
     350           0 :   IPosition gridShape(4, nx, ny, npol, nchan);
     351           0 :   griddedData.resize(gridShape);
     352             :   //griddedData can be a reference of image data...if not using model col
     353             :   //hence using an undocumented feature of resize that if 
     354             :   //the size is the same as old data it is not changed.
     355             :   //if(!usePut2_p) griddedData.set(0);
     356           0 :   griddedData.set(Complex(0.0));
     357             : 
     358           0 :   IPosition stride(4, 1);
     359           0 :   IPosition blc(4, (nx-image->shape()(0)+(nx%2==0))/2, (ny-image->shape()(1)+(ny%2==0))/2, 0, 0);
     360           0 :   IPosition trc(blc+image->shape()-stride);
     361             :   
     362           0 :   IPosition start(4, 0);
     363           0 :   griddedData(blc, trc) = image->getSlice(start, image->shape());
     364             :   
     365             :   //if(arrayLattice) delete arrayLattice; arrayLattice=0;
     366           0 :   arrayLattice = new ArrayLattice<Complex>(griddedData);
     367           0 :   lattice=arrayLattice;
     368             :   //logIO() << LogIO::DEBUGGING
     369             :   //      << "Starting grid correction and FFT of image" << LogIO::POST;
     370             : 
     371             :    // Do the Grid-correction. 
     372             :    {
     373           0 :      Vector<Complex> correction(nx);
     374           0 :      correction=Complex(1.0, 0.0);
     375             :      // Do the Grid-correction
     376           0 :      IPosition cursorShape(4, nx, 1, 1, 1);
     377           0 :      IPosition axisPath(4, 0, 1, 2, 3);
     378           0 :      LatticeStepper lsx(lattice->shape(), cursorShape, axisPath);
     379           0 :      LatticeIterator<Complex> lix(*lattice, lsx);
     380           0 :      for(lix.reset();!lix.atEnd();lix++) {
     381           0 :        gridder->correctX1D(correction, lix.position()(1));
     382           0 :        lix.rwVectorCursor()/=correction;
     383             :      }
     384           0 :    }
     385           0 :    image->clearCache();
     386             :    // Now do the FFT2D in place
     387           0 :    LatticeFFT::cfft2d(*lattice);
     388             :    
     389             :    //logIO() << LogIO::DEBUGGING
     390             :    //       << "Finished grid correction and FFT of image" << LogIO::POST;
     391             :     
     392           0 : }
     393             : 
     394             : 
     395           0 : void GridFT::finalizeToVis()
     396             : {
     397             : 
     398             :   //cerr <<"Time to degrid " << timedegrid_p << endl;
     399           0 :   timedegrid_p=0.0;
     400             : 
     401           0 :   if(!arrayLattice.null()) arrayLattice=0;
     402           0 :   if(!lattice.null()) lattice=0;
     403           0 :   griddedData.resize();
     404             : 
     405           0 :   if(isTiled) {
     406             : 
     407           0 :     logIO() << LogOrigin("GridFT", "finalizeToVis")  << LogIO::NORMAL;
     408             : 
     409           0 :     AlwaysAssert(imageCache, AipsError);
     410           0 :     AlwaysAssert(image, AipsError);
     411           0 :     ostringstream o;
     412           0 :     imageCache->flush();
     413           0 :     imageCache->showCacheStatistics(o);
     414           0 :     logIO() << o.str() << LogIO::POST;
     415           0 :   }
     416           0 : }
     417             : 
     418             : 
     419             : // Initialize the FFT to the Sky. Here we have to setup and initialize the
     420             : // grid. 
     421           1 : void GridFT::initializeToSky(ImageInterface<Complex>& iimage,
     422             :                              Matrix<Float>& weight, const VisBuffer& vb)
     423             : {
     424             :   // image always points to the image
     425           1 :   image=&iimage;
     426           1 :   toVis_p=false;
     427             : 
     428           1 :   init();
     429             : 
     430             :   // Initialize the maps for polarization and channel. These maps
     431             :   // translate visibility indices into image indices
     432           1 :   initMaps(vb);
     433             : 
     434             : 
     435             :   
     436           1 :   sumWeight=0.0;
     437           1 :   weight.resize(sumWeight.shape());
     438           1 :   weight=0.0;
     439             : 
     440             :   // Initialize for in memory or to disk gridding. lattice will
     441             :   // point to the appropriate Lattice, either the ArrayLattice for
     442             :   // in memory gridding or to the image for to disk gridding.
     443           1 :   if(isTiled) {
     444           0 :     imageCache->flush();
     445           0 :     image->set(Complex(0.0));
     446           0 :     lattice=CountedPtr<Lattice<Complex> >(image, false);
     447             :   }
     448             :   else {
     449           1 :     IPosition gridShape(4, nx, ny, npol, nchan);
     450           1 :     if( !useDoubleGrid_p )
     451             :       {
     452           1 :         griddedData.resize(gridShape);
     453           1 :         griddedData=Complex(0.0);
     454             :       }
     455           1 :     if(useDoubleGrid_p){
     456             :       //griddedData.resize();
     457           0 :       griddedData2.resize(gridShape);
     458           0 :       griddedData2=DComplex(0.0);
     459             :     }
     460           1 :     image->clearCache();
     461             :     //iimage.get(griddedData, false);
     462             :     //if(arrayLattice) delete arrayLattice; arrayLattice=0;
     463             :     
     464           1 :   }
     465             :   //AlwaysAssert(lattice, AipsError);
     466           1 : }
     467             : 
     468             : 
     469             : 
     470           1 : void GridFT::finalizeToSky()
     471             : {  
     472             :   //AlwaysAssert(lattice, AipsError);
     473             :   // Now we flush the cache and report statistics
     474             :   // For memory based, we don't write anything out yet.
     475             :   //cerr <<"Time to massage data " << timemass_p << endl;
     476             :   //cerr <<"Time to grid data " << timegrid_p << endl;
     477           1 :   timemass_p=0.0;
     478           1 :   timegrid_p=0.0;
     479           1 :   if(isTiled) {
     480           0 :     logIO() << LogOrigin("GridFT", "finalizeToSky")  << LogIO::NORMAL;
     481             : 
     482           0 :     AlwaysAssert(image, AipsError);
     483           0 :     AlwaysAssert(imageCache, AipsError);
     484           0 :     imageCache->flush();
     485           0 :     ostringstream o;
     486           0 :     imageCache->showCacheStatistics(o);
     487           0 :     logIO() << o.str() << LogIO::POST;
     488           0 :   }
     489             :   //  peek->terminate();
     490             :   //  peek->reset();
     491           1 : }
     492             : 
     493             : 
     494             : 
     495           0 : Array<Complex>* GridFT::getDataPointer(const IPosition& centerLoc2D,
     496             :                                        Bool readonly) {
     497             :   Array<Complex>* result;
     498             :   // Is tiled: get tiles and set up offsets
     499           0 :   centerLoc(0)=centerLoc2D(0);
     500           0 :   centerLoc(1)=centerLoc2D(1);
     501           0 :   result=&imageCache->tile(offsetLoc,centerLoc, readonly);
     502           0 :   gridder->setOffset(IPosition(2, offsetLoc(0), offsetLoc(1)));
     503           0 :   return result;
     504             : }
     505             : 
     506             : #define NEED_UNDERSCORES
     507             : #if defined(NEED_UNDERSCORES)
     508             : #define ggrid ggrid_
     509             : #define dgrid dgrid_
     510             : #define ggrids ggrids_
     511             : #define sectggridd sectggridd_
     512             : #define sectggrids sectggrids_
     513             : #define sectdgrid sectdgrid_
     514             : #define locuvw locuvw_
     515             : #endif
     516             : 
     517             : extern "C" { 
     518             :   void locuvw(const Double*, const Double*, const Double*, const Int*, const Double*, const Double*, const Int*, 
     519             :               Int*, Int*, Complex*, const Int*, const Int*, const Double*);
     520             :    void ggrid(Double*,
     521             :                 Double*,
     522             :                 const Complex*,
     523             :                 Int*,
     524             :                 Int*,
     525             :                 Int*,
     526             :                 const Int*,
     527             :                 const Int*,
     528             :                 const Float*,
     529             :                 Int*,
     530             :                 Int*,
     531             :                 Double*,
     532             :                 Double*,
     533             :                 DComplex*,
     534             :                 Int*,
     535             :                 Int*,
     536             :                 Int *,
     537             :                 Int *,
     538             :                 const Double*,
     539             :                 const Double*,
     540             :                 Int*,
     541             :                 Int*,
     542             :                 Double*,
     543             :                 Int*,
     544             :                 Int*,
     545             :                 Double*);
     546             :   void sectggridd(const Complex*,
     547             :                 const Int*,
     548             :                 const Int*,
     549             :                 const Int*,
     550             :                 const Int*,
     551             :                 const Int*,
     552             :                 const Float*,
     553             :                 const Int*,
     554             :                 DComplex*,
     555             :                 const Int*,
     556             :                 const Int*,
     557             :                 const Int *,
     558             :                 const Int *,
     559             :                   //support
     560             :                 const Int*,
     561             :                 const Int*,
     562             :                 const Double*,
     563             :                 const Int*,
     564             :                 const Int*,
     565             :                   Double*,
     566             :                   const Int*,
     567             :                   const Int*, 
     568             :                   const Int*,
     569             :                   const Int*,
     570             :                   const Int*, 
     571             :                   const Int*,
     572             :                   //loc, off, phasor
     573             :                   const Int*,
     574             :                   const Int*,
     575             :                   const Complex*);
     576             :   //single precision gridder
     577             :   void sectggrids(const Complex*,
     578             :                 const Int*,
     579             :                 const Int*,
     580             :                 const Int*,
     581             :                 const Int*,
     582             :                 const Int*,
     583             :                 const Float*,
     584             :                 const Int*,
     585             :                 Complex*,
     586             :                 const Int*,
     587             :                 const Int*,
     588             :                 const Int *,
     589             :                 const Int *,
     590             :                 const Int*,
     591             :                 const Int*,
     592             :                 const Double*,
     593             :                 const Int*,
     594             :                 const Int*,
     595             :                   Double*,
     596             :                   const Int*,
     597             :                   const Int*, 
     598             :                   const Int*,
     599             :                   const Int*,
     600             :                   const Int*, 
     601             :                   const Int*,
     602             :                   //loc, off, phasor
     603             :                   const Int*,
     604             :                   const Int*,
     605             :                   const Complex*);
     606             :   void ggrids(Double*,
     607             :                 Double*,
     608             :                 const Complex*,
     609             :                 Int*,
     610             :                 Int*,
     611             :                 Int*,
     612             :                 const Int*,
     613             :                 const Int*,
     614             :                 const Float*,
     615             :                 Int*,
     616             :                 Int*,
     617             :                 Double*,
     618             :                 Double*,
     619             :                 Complex*,
     620             :                 Int*,
     621             :                 Int*,
     622             :                 Int *,
     623             :                 Int *,
     624             :                 const Double*,
     625             :                 const Double*,
     626             :                 Int*,
     627             :                 Int*,
     628             :                 Double*,
     629             :                 Int*,
     630             :                 Int*,
     631             :                 Double*);
     632             : 
     633             :    void dgrid(Double*,
     634             :                 Double*,
     635             :                 Complex*,
     636             :                 Int*,
     637             :                 Int*,
     638             :                 const Int*,
     639             :                 const Int*,
     640             :                 Int*,
     641             :                 Int*,
     642             :                 Double*,
     643             :                 Double*,
     644             :                 const Complex*,
     645             :                 Int*,
     646             :                 Int*,
     647             :                 Int *,
     648             :                 Int *,
     649             :                 const Double*,
     650             :                 const Double*,
     651             :                 Int*,
     652             :                 Int*,
     653             :                 Double*,
     654             :                 Int*,
     655             :                 Int*);
     656             : 
     657             :   void sectdgrid(Complex*,
     658             :                 const Int*,
     659             :                 const Int*,
     660             :                 const Int*,
     661             :                 const Int*,
     662             :                 const Int*,
     663             :                 const Complex*,
     664             :                 const Int*,
     665             :                 const Int*,
     666             :                 const Int *,
     667             :                 const Int *,
     668             :                  //support
     669             :                 const Int*,
     670             :                 const Int*,
     671             :                 const Double*,
     672             :                 const Int*,
     673             :                  const Int*,
     674             :                  //rbeg, rend, loc, off, phasor
     675             :                  const Int*,
     676             :                  const Int*,
     677             :                  const Int*,
     678             :                  const Int*,
     679             :                  const Complex*);
     680             : }
     681         200 : void GridFT::put(const VisBuffer& vb, Int row, Bool dopsf, 
     682             :                  FTMachine::Type type)
     683             : {
     684             : 
     685         200 :   gridOk(convSupport_p);
     686             :   //  peek->setVBPtr(&vb);
     687             : 
     688             :   //Check if ms has changed then cache new spw and chan selection
     689         200 :   if(vb.newMS())
     690           0 :     matchAllSpwChans(vb);
     691             :   
     692             :   //Here we redo the match or use previous match
     693             :   
     694             :   //Channel matching for the actual spectral window of buffer
     695         200 :   if(doConversion_p[vb.spectralWindow()]){
     696           0 :     matchChannel(vb.spectralWindow(), vb);
     697             :   }
     698             :   else{
     699         200 :     chanMap.resize();
     700         200 :     chanMap=multiChanMap_p[vb.spectralWindow()];
     701             :   }
     702             : 
     703             :   //No point in reading data if its not matching in frequency
     704         200 :   if(max(chanMap)==-1)
     705             :     {
     706             :       //      peek->reset();
     707           0 :       return;
     708             :     }
     709             : 
     710         200 :   Timer tim;
     711         200 :   tim.mark();
     712             : 
     713             :   const Matrix<Float> *imagingweight;
     714         200 :   imagingweight=&(vb.imagingWeight());
     715             :   
     716         200 :   if(dopsf) {type=FTMachine::PSF;}
     717             : 
     718         200 :   Cube<Complex> data;
     719             :   //Fortran gridder need the flag as ints 
     720         200 :   Cube<Int> flags;
     721         200 :   Matrix<Float> elWeight;
     722         200 :   interpolateFrequencyTogrid(vb, *imagingweight,data, flags, elWeight, type);
     723             : 
     724             : 
     725             :   Bool iswgtCopy;
     726             :   const Float *wgtStorage;
     727         200 :   wgtStorage=elWeight.getStorage(iswgtCopy);
     728             :   
     729             :   Bool isCopy;
     730             :   const Complex *datStorage;
     731         200 :   if(!dopsf)
     732         200 :     datStorage=data.getStorage(isCopy);
     733             :   else
     734           0 :     datStorage=0;
     735             :   // If row is -1 then we pass through all rows
     736             :   Int startRow, endRow, nRow;
     737         200 :   if (row==-1) {
     738         200 :     nRow=vb.nRow();
     739         200 :     startRow=0;
     740         200 :     endRow=nRow-1;
     741             :   } else {
     742           0 :     nRow=1;
     743           0 :     startRow=row;
     744           0 :     endRow=row;
     745             :   }
     746             : 
     747             :   //cerr << "nRow " << nRow << endl;
     748             : 
     749             : 
     750             :   // Get the uvws in a form that Fortran can use and do that
     751             :   // necessary phase rotation. On a Pentium Pro 200 MHz
     752             :   // when null, this step takes about 50us per uvw point. This
     753             :   // is just barely noticeable for Stokes I continuum and
     754             :   // irrelevant for other cases.
     755             :  
     756             :   Bool del; 
     757             :   //    IPosition s(flags.shape());
     758         200 :   const IPosition &fs=flags.shape();
     759         200 :   std::vector<Int> s(fs.begin(),fs.end());
     760         200 :   Int nvispol=s[0];
     761         200 :   Int nvischan=s[1];
     762         200 :   Int nvisrow=s[2];
     763         200 :   Matrix<Double> uvw(3, vb.uvw().nelements());
     764         200 :   uvw=0.0;
     765         200 :   Vector<Double> dphase(vb.uvw().nelements());
     766         200 :   Cube<Int> loc(2, nvischan, nRow);
     767         200 :   Cube<Int> off(2, nvischan, nRow);
     768         200 :   Matrix<Complex> phasor(nvischan, nRow);
     769         200 :   Int csamp=convSampling_p;
     770         200 :   dphase=0.0;
     771             :   //NEGATING to correct for an image inversion problem
     772       70400 :   for (Int i=startRow;i<=endRow;i++) {
     773      210600 :     for (Int idim=0;idim<2;idim++) uvw(idim,i)=-vb.uvw()(i)(idim);
     774       70200 :     uvw(2,i)=vb.uvw()(i)(2);
     775             :   }
     776         200 :   timemass_p +=tim.real();
     777         200 :   tim.mark(); 
     778         200 :   rotateUVW(uvw, dphase, vb);
     779         200 :   refocus(uvw, vb.antenna1(), vb.antenna2(), dphase, vb);
     780             :   Bool delphase;
     781         200 :   Complex * phasorstor=phasor.getStorage(delphase);
     782         200 :   const Double * visfreqstor=interpVisFreq_p.getStorage(del);
     783         200 :   const Double * scalestor=uvScale.getStorage(del);
     784         200 :   const Double * offsetstor=uvOffset.getStorage(del);
     785         200 :   const Double* uvstor= uvw.getStorage(del);
     786         200 :   Int * locstor=loc.getStorage(del);
     787         200 :   Int * offstor=off.getStorage(del);
     788         200 :   const Double *dpstor=dphase.getStorage(del);
     789             :   //Vector<Double> f1=interpVisFreq_p.copy();
     790         200 :   Int nvchan=nvischan;
     791             :   Int irow;
     792         200 :   Double cinv=Double(1.0)/C::c;
     793         200 :   Int dow=0;
     794         200 :   Int nth=1;
     795             : #ifdef _OPENMP
     796         200 :   if(numthreads_p >0){
     797           0 :     nth=min(numthreads_p, omp_get_max_threads());
     798             :   }
     799             :   else{   
     800         200 :     nth= omp_get_max_threads();
     801             :   }
     802         200 :   nth=min(4,nth);
     803             : #endif
     804             :   
     805             : 
     806         200 : #pragma omp parallel default(none) private(irow) firstprivate(visfreqstor, nvchan, scalestor, offsetstor, csamp, phasorstor, uvstor, locstor, offstor, dpstor, cinv, dow) shared(startRow, endRow) num_threads(nth)
     807             :   {
     808             : #pragma omp for
     809             :   for (irow=startRow; irow<=endRow; ++irow){
     810             :     //locateuvw(uvstor,dpstor, visfreqstor, nvchan, scalestor, offsetstor, csamp, 
     811             :     //        locstor, 
     812             :     //        offstor, phasorstor, irow);
     813             :     locuvw(uvstor, dpstor, visfreqstor, &nvchan, scalestor, offsetstor, &csamp, locstor, offstor, phasorstor, &irow, &dow, &cinv); 
     814             :   }  
     815             : 
     816             :   }//end pragma parallel
     817             :   // Take care of translation of Bools to Integer
     818             :   //////TESTOO
     819             :   //ofstream myfile;
     820             :   //myfile.open ("putLoc.txt", ios::out | ios::app | ios::ate );
     821             :   //myfile << vb.rowIds()(0) << " uv " << uvw.column(0) << " loc " << loc(0,0,0) << ", " << loc(1,0,0) << "\n" << endl;
     822             :   //myfile.close();
     823             :   ///////////////
     824             :   
     825         200 :   Int idopsf=0;
     826         200 :   if(dopsf) idopsf=1;
     827             : 
     828             : 
     829         200 :   Vector<Int> rowFlags(vb.nRow());
     830         200 :   rowFlags=0;
     831         200 :   rowFlags(vb.flagRow())=true;
     832         200 :   if(!usezero_p) {
     833       70400 :     for (Int rownr=startRow; rownr<=endRow; rownr++) {
     834       70200 :       if(vb.antenna1()(rownr)==vb.antenna2()(rownr)) rowFlags(rownr)=1;
     835             :     }
     836             :   }
     837             :   
     838             :   /////////////Some extra stuff for openmp
     839             : 
     840             :   Int x0, y0, nxsub, nysub, ixsub, iysub, icounter, ix, iy;
     841         200 :   Int csupp=convSupport_p;
     842             :   
     843         200 :   const Double * convfuncstor=(gridder->cFunction()).getStorage(del);
     844             :   
     845             :   // cerr <<"Poffset " << min(off) << "  " << max(off) << " length " << gridder->cFunction().shape() << endl;
     846             :   
     847             : 
     848             : 
     849         200 :   ixsub=1;
     850         200 :   iysub=1; 
     851         200 :   if (nth >3){
     852         200 :     ixsub=2;
     853         200 :     iysub=2; 
     854             :   }
     855           0 :   else if(nth >1){
     856           0 :      ixsub=2;
     857           0 :      iysub=1; 
     858             :   }
     859             : 
     860         200 :   x0=1;
     861         200 :   y0=1;
     862         200 :   nxsub=nx;
     863         200 :   nysub=ny;
     864         200 :   Int rbeg=startRow+1;
     865         200 :   Int rend=endRow+1;
     866         200 :   Block<Matrix<Double> > sumwgt(ixsub*iysub);
     867        1000 :   for (icounter=0; icounter < ixsub*iysub; ++icounter){
     868         800 :     sumwgt[icounter].resize(sumWeight.shape());
     869         800 :     sumwgt[icounter].set(0.0);
     870             :   }
     871         200 :   const Int* pmapstor=polMap.getStorage(del);
     872         200 :   const Int *cmapstor=chanMap.getStorage(del);
     873         200 :   Int nc=nchan;
     874         200 :   Int np=npol;
     875         200 :   Int nxp=nx;
     876         200 :   Int nyp=ny;
     877         200 :   const Int * flagstor=flags.getStorage(del);
     878         200 :   const Int * rowflagstor=rowFlags.getStorage(del);
     879             :   ////////////////////////
     880             : 
     881             :   Bool gridcopy;
     882         200 :   if(useDoubleGrid_p){
     883           0 :     DComplex *gridstor=griddedData2.getStorage(gridcopy);
     884           0 : #pragma omp parallel default(none) private(icounter,ix,iy,x0,y0,nxsub,nysub, del) firstprivate(idopsf, datStorage, wgtStorage, flagstor, rowflagstor, convfuncstor, pmapstor, cmapstor, gridstor, nxp, nyp, np, nc,ixsub, iysub, rend, rbeg, csamp, csupp, nvispol, nvischan, nvisrow, phasorstor, locstor, offstor) shared(sumwgt) num_threads(ixsub*iysub)
     885             :   
     886             :   {
     887             :     //cerr << "numthreads " << omp_get_num_threads() << endl;
     888             : #pragma omp for 
     889             :     for(icounter=0; icounter < ixsub*iysub; ++icounter){
     890             :       //cerr << "thread id " << omp_get_thread_num() << endl;
     891             :       ix= (icounter+1)-((icounter)/ixsub)*ixsub;
     892             :       iy=(icounter)/ixsub+1;
     893             :       y0=(nyp/iysub)*(iy-1)+1;
     894             :       nysub=nyp/iysub;
     895             :       if( iy == iysub) {
     896             :         nysub=nyp-(nyp/iysub)*(iy-1);
     897             :       }
     898             :       x0=(nxp/ixsub)*(ix-1)+1;
     899             :       nxsub=nxp/ixsub;
     900             :       if( ix == ixsub){
     901             :         nxsub=nxp-(nxp/ixsub)*(ix-1);
     902             :       } 
     903             :       sectggridd(datStorage,
     904             :           &nvispol,
     905             :           &nvischan,
     906             :           &idopsf,
     907             :           flagstor,
     908             :           rowflagstor,
     909             :           wgtStorage,
     910             :           &nvisrow,
     911             :           gridstor,
     912             :           &nxp,
     913             :           &nyp,
     914             :           &np,
     915             :           &nc,
     916             :           &csupp,
     917             :            &csamp,
     918             :           convfuncstor,
     919             :           cmapstor,
     920             :           pmapstor,
     921             :          (sumwgt[icounter]).getStorage(del),
     922             :                  &x0, &y0, &nxsub, &nysub, &rbeg, &rend, locstor, offstor,
     923             :                  phasorstor);
     924             :     }//end for
     925             :   }// end pragma parallel
     926           0 :   for (icounter=0; icounter < ixsub*iysub; ++icounter){
     927           0 :       sumWeight=sumWeight+sumwgt[icounter];
     928             :   }
     929             :   //phasor.putStorage(phasorstor, delphase); 
     930           0 :   griddedData2.putStorage(gridstor, gridcopy);
     931             :   }
     932             :   else{
     933         200 :     Complex *gridstor=griddedData.getStorage(gridcopy);
     934         200 : #pragma omp parallel default(none) private(icounter,ix,iy,x0,y0,nxsub,nysub, del) firstprivate(idopsf, datStorage, wgtStorage, flagstor, rowflagstor, convfuncstor, pmapstor, cmapstor, gridstor, nxp, nyp, np, nc,ixsub, iysub, rend, rbeg, csamp, csupp, nvispol, nvischan, nvisrow, phasorstor, locstor, offstor) shared(sumwgt) num_threads(ixsub*iysub)
     935             :     {
     936             :       //cerr << "numthreads " << omp_get_num_threads() << endl;
     937             : #pragma omp for
     938             : 
     939             :       for(icounter=0; icounter < ixsub*iysub; ++icounter){
     940             :         //cerr << "thread id " << omp_get_thread_num() << endl;
     941             :         ix= (icounter+1)-((icounter)/ixsub)*ixsub;
     942             :         iy=(icounter)/ixsub+1;
     943             :         y0=(nyp/iysub)*(iy-1)+1;
     944             :         nysub=nyp/iysub;
     945             :         if( iy == iysub) {
     946             :           nysub=nyp-(nyp/iysub)*(iy-1);
     947             :         }
     948             :         x0=(nxp/ixsub)*(ix-1)+1;
     949             :         nxsub=nxp/ixsub;
     950             :         if( ix == ixsub){
     951             :           nxsub=nxp-(nxp/ixsub)*(ix-1);
     952             :         } 
     953             :         //cerr << "x0 " << x0 << " y0 " << y0 << " nxsub " << nxsub << " nysub " << nysub << endl;
     954             :         sectggrids(datStorage,
     955             :                    &nvispol,
     956             :                    &nvischan,
     957             :                    &idopsf,
     958             :                    flagstor,
     959             :                    rowflagstor,
     960             :                    wgtStorage,
     961             :                    &nvisrow,
     962             :                    gridstor,
     963             :                    &nxp,
     964             :                    &nyp,
     965             :                    &np,
     966             :                    &nc,
     967             :                    &csupp,
     968             :                    &csamp,
     969             :                    convfuncstor,
     970             :                    cmapstor,
     971             :                    pmapstor,
     972             :                    (sumwgt[icounter]).getStorage(del),
     973             :                    &x0, &y0, &nxsub, &nysub, &rbeg, &rend, locstor, offstor,
     974             :                    phasorstor);
     975             :       }//end for
     976             :   }// end pragma parallel
     977        1000 :     for (icounter=0; icounter < ixsub*iysub; ++icounter){
     978         800 :       sumWeight=sumWeight+sumwgt[icounter];
     979             :     }
     980             :     
     981         200 :     griddedData.putStorage(gridstor, gridcopy);
     982             :   }
     983             :   // cerr << "sunweight " << sumWeight << endl;
     984             : 
     985         200 :   timegrid_p+=tim.real();
     986             :   
     987         200 :   if(!dopsf)
     988         200 :     data.freeStorage(datStorage, isCopy);
     989         200 :   elWeight.freeStorage(wgtStorage,iswgtCopy);
     990             :   
     991             :   //  peek->reset();
     992         200 : }
     993             : 
     994           0 : void GridFT::modifyConvFunc(const Vector<Double>& convFunc, Int convSupport, Int convSampling){
     995           0 :   convFunc_p.resize();
     996           0 :   convFunc_p=convFunc;
     997           0 :   convSupport_p=convSupport;
     998           0 :   convSampling_p=convSampling;
     999             : 
    1000           0 : } 
    1001             : 
    1002           0 : void GridFT::get(VisBuffer& vb, Int row)
    1003             : {
    1004             : 
    1005           0 :   gridOk(convSupport_p);
    1006             :   // If row is -1 then we pass through all rows
    1007             :   Int startRow, endRow, nRow;
    1008           0 :   if (row < 0) {
    1009           0 :     nRow=vb.nRow();
    1010           0 :     startRow=0;
    1011           0 :     endRow=nRow-1;
    1012             :     //unnecessary zeroing
    1013             :     //vb.modelVisCube()=Complex(0.0,0.0);
    1014             :   } else {
    1015           0 :     nRow=1;
    1016           0 :     startRow=row;
    1017           0 :     endRow=row;
    1018             :     //unnecessary zeroing
    1019             :     //vb.modelVisCube().xyPlane(row)=Complex(0.0,0.0);
    1020             :   }
    1021             : 
    1022             :   // Get the uvws in a form that Fortran can use
    1023           0 :   Matrix<Double> uvw(3, vb.uvw().nelements());
    1024           0 :   uvw=0.0;
    1025           0 :   Vector<Double> dphase(vb.uvw().nelements());
    1026           0 :   dphase=0.0;
    1027             :   //NEGATING to correct for an image inversion problem
    1028           0 :   for (Int i=startRow;i<=endRow;i++) {
    1029           0 :     for (Int idim=0;idim<2;idim++) uvw(idim,i)=-vb.uvw()(i)(idim);
    1030           0 :     uvw(2,i)=vb.uvw()(i)(2);
    1031             :   }
    1032           0 :   rotateUVW(uvw, dphase, vb);
    1033           0 :   refocus(uvw, vb.antenna1(), vb.antenna2(), dphase, vb);
    1034             : 
    1035             :   
    1036             : 
    1037             :   //Check if ms has changed then cache new spw and chan selection
    1038           0 :   if(vb.newMS())
    1039           0 :     matchAllSpwChans(vb);
    1040             : 
    1041             : 
    1042             :   //Here we redo the match or use previous match
    1043             :   
    1044             :   //Channel matching for the actual spectral window of buffer
    1045           0 :   if(doConversion_p[vb.spectralWindow()]){
    1046           0 :     matchChannel(vb.spectralWindow(), vb);
    1047             :   }
    1048             :   else{
    1049           0 :     chanMap.resize();
    1050           0 :     chanMap=multiChanMap_p[vb.spectralWindow()];
    1051             :   }
    1052             : 
    1053             :   //cerr << "chanMap " << chanMap << endl;
    1054             :   //No point in reading data if its not matching in frequency
    1055           0 :   if(max(chanMap)==-1)
    1056           0 :     return;
    1057             : 
    1058           0 :   Cube<Complex> data;
    1059           0 :   Cube<Int> flags;
    1060           0 :   getInterpolateArrays(vb, data, flags);
    1061             : 
    1062             :   //cerr << "max min data " << max(griddedData) << " " << min(griddedData) << "  flags  " << max(flags) << "    " << min(flags) << endl;  
    1063             : 
    1064             :   //    IPosition s(data.shape());
    1065           0 :   Int nvp=data.shape()(0);
    1066           0 :   Int nvc=data.shape()(1);
    1067           0 :   Int nvisrow=data.shape()(2);
    1068             :     
    1069             : 
    1070             :   //cerr << "get flags " << min(flags) << "  " << max(flags) << endl;
    1071             :   Complex *datStorage;
    1072             :   Bool isCopy;
    1073           0 :   datStorage=data.getStorage(isCopy);
    1074             :   
    1075             :   ///
    1076           0 :   Cube<Int> loc(2, nvc, nvisrow);
    1077           0 :   Cube<Int> off(2, nvc, nRow);
    1078           0 :   Matrix<Complex> phasor(nvc, nRow);
    1079           0 :   Int csamp=convSampling_p;
    1080             :   Bool delphase;
    1081             :   Bool del;
    1082           0 :   Complex * phasorstor=phasor.getStorage(delphase);
    1083           0 :   const Double * visfreqstor=interpVisFreq_p.getStorage(del);
    1084           0 :   const Double * scalestor=uvScale.getStorage(del);
    1085           0 :   const Double * offsetstor=uvOffset.getStorage(del);
    1086           0 :   const Double* uvstor= uvw.getStorage(del);
    1087           0 :   Int * locstor=loc.getStorage(del);
    1088           0 :   Int * offstor=off.getStorage(del);
    1089           0 :   const Double *dpstor=dphase.getStorage(del);
    1090             :   //Vector<Double> f1=interpVisFreq_p.copy();
    1091           0 :   Int nvchan=nvc;
    1092             :   Int irow;
    1093           0 :   Double cinv=Double(1.0)/C::c;
    1094           0 :   Int dow=0;
    1095           0 :   Int nth=1;
    1096             : #ifdef _OPENMP
    1097           0 :   if(numthreads_p >0){
    1098           0 :     nth=min(numthreads_p, omp_get_max_threads());
    1099             :   }
    1100             :   else{   
    1101           0 :     nth= omp_get_max_threads();
    1102             :   }
    1103           0 :   nth=min(4,nth);
    1104             : #endif
    1105             : 
    1106             : 
    1107           0 : #pragma omp parallel default(none) private(irow) firstprivate(visfreqstor, nvchan, scalestor, offsetstor, csamp, phasorstor, uvstor, locstor, offstor, dpstor, cinv, dow) shared(startRow, endRow) num_threads(nth) 
    1108             : 
    1109             :   {
    1110             : #pragma omp for
    1111             :   for (irow=startRow; irow<=endRow; ++irow){
    1112             :     //locateuvw(uvstor,dpstor, visfreqstor, nvchan, scalestor, offsetstor, csamp, 
    1113             :     //        locstor, 
    1114             :     //        offstor, phasorstor, irow);
    1115             :     
    1116             :     locuvw(uvstor, dpstor, visfreqstor, &nvchan, scalestor, offsetstor, &csamp, locstor, offstor, phasorstor, &irow, &dow, &cinv);
    1117             :   }  
    1118             : 
    1119             :   }//end pragma parallel
    1120             : 
    1121           0 :   Int rbeg=startRow+1;
    1122           0 :   Int rend=endRow+1;
    1123             : 
    1124             : 
    1125           0 :   Vector<Int> rowFlags(vb.nRow());
    1126           0 :   rowFlags=0;
    1127           0 :   rowFlags(vb.flagRow())=true;
    1128             :   //cerr << "rowFlags " << rowFlags << endl;
    1129           0 :   if(!usezero_p) {
    1130           0 :     for (Int rownr=startRow; rownr<=endRow; rownr++) {
    1131           0 :       if(vb.antenna1()(rownr)==vb.antenna2()(rownr)) rowFlags(rownr)=1;
    1132             :     }
    1133             :   }
    1134             : 
    1135             : 
    1136             :   //cerr <<"offset " << min(off) << "  " <<max(off) << " length " << gridder->cFunction().shape() << endl;
    1137             : 
    1138             :   {
    1139             :     Bool delgrid;
    1140           0 :     const Complex* gridstor=griddedData.getStorage(delgrid);
    1141           0 :     const Double * convfuncstor=convFunc_p.getStorage(del);;
    1142             :     
    1143           0 :     const Int* pmapstor=polMap.getStorage(del);
    1144           0 :     const Int *cmapstor=chanMap.getStorage(del);
    1145           0 :     Int nc=nchan;
    1146           0 :     Int np=npol;
    1147           0 :     Int nxp=nx;
    1148           0 :     Int nyp=ny;
    1149           0 :     Int csupp=convSupport_p;
    1150           0 :     const Int * flagstor=flags.getStorage(del);
    1151           0 :     const Int * rowflagstor=rowFlags.getStorage(del);
    1152             : 
    1153             : 
    1154           0 :     Int npart=1;
    1155           0 :     if (nth >3){
    1156           0 :       npart=4;
    1157             :     }
    1158           0 :     else if(nth >1){
    1159           0 :      npart=2; 
    1160             :     }
    1161             : 
    1162           0 :     Int ix=0;
    1163           0 : #pragma omp parallel default(none) private(ix, rbeg, rend) firstprivate(datStorage, flagstor, rowflagstor, convfuncstor, pmapstor, cmapstor, gridstor, nxp, nyp, np, nc, csamp, csupp, nvp, nvc, nvisrow, phasorstor, locstor, offstor) shared(npart) num_threads(npart)
    1164             :     { 
    1165             : #pragma omp for 
    1166             :       for (ix=0; ix< npart; ++ix){
    1167             :         rbeg=ix*(nvisrow/npart)+1;
    1168             :         rend=(ix != (npart-1)) ? (rbeg+(nvisrow/npart)-1) : (rbeg+(nvisrow/npart)+nvisrow%npart-1) ;
    1169             :         //cerr << "rbeg " << rbeg << " rend " << rend << "  " << nvisrow << endl;
    1170             :         
    1171             :         sectdgrid(datStorage,
    1172             :                   &nvp,
    1173             :                   &nvc,
    1174             :                   flagstor,
    1175             :                   rowflagstor,
    1176             :                   &nvisrow,
    1177             :                   gridstor,
    1178             :                   &nxp,
    1179             :                   &nyp,
    1180             :                   &np,
    1181             :                   &nc,
    1182             :                   &csupp,
    1183             :                   &csamp,
    1184             :                   convfuncstor,
    1185             :                   cmapstor,
    1186             :                   pmapstor,
    1187             :                   &rbeg, &rend, locstor, offstor, phasorstor);
    1188             :       }//end pragma parallel
    1189             :     }
    1190           0 :     data.putStorage(datStorage, isCopy);
    1191           0 :     griddedData.freeStorage(gridstor, delgrid);
    1192             :     //cerr << "Get min max " << min(data) << "   " << max(data) << endl;
    1193             :   }
    1194           0 :   interpolateFrequencyFromgrid(vb, data, FTMachine::MODEL);
    1195             : 
    1196           0 : }
    1197             : 
    1198             : 
    1199             : 
    1200             : // Finalize the FFT to the Sky. Here we actually do the FFT and
    1201             : // return the resulting image
    1202           1 : ImageInterface<Complex>& GridFT::getImage(Matrix<Float>& weights, Bool normalize) 
    1203             : {
    1204             :   //AlwaysAssert(lattice, AipsError);
    1205           1 :   AlwaysAssert(gridder, AipsError);
    1206           1 :   AlwaysAssert(image, AipsError);
    1207           1 :   logIO() << LogOrigin("GridFT", "getImage") << LogIO::NORMAL;
    1208             : 
    1209           1 :   if((griddedData.nelements() ==0) && (griddedData2.nelements()==0)){
    1210           0 :     throw(AipsError("Programmer error ...request for image without right order of calls"));
    1211             :   }
    1212           1 :   weights.resize(sumWeight.shape());
    1213             : 
    1214           1 :   convertArray(weights, sumWeight);
    1215             :   // If the weights are all zero then we cannot normalize
    1216             :   // otherwise we don't care.
    1217           1 :   if(normalize&&max(weights)==0.0) {
    1218             :     logIO() << LogIO::SEVERE << "No useful data in GridFT: weights all zero"
    1219           0 :             << LogIO::POST;
    1220             :   }
    1221             :   else {
    1222             : 
    1223             :     //const IPosition latticeShape = lattice->shape();
    1224             :     
    1225             :     //logIO() << LogIO::DEBUGGING
    1226             :     //      << "Starting FFT and scaling of image" << LogIO::POST;
    1227             :     
    1228             : 
    1229             :   
    1230             :     // if(useDoubleGrid_p){
    1231             :     //   convertArray(griddedData, griddedData2);
    1232             :     //   //Don't need the double-prec grid anymore...
    1233             :     //   griddedData2.resize();
    1234             :     // }
    1235             : 
    1236             :     // x and y transforms
    1237             :     //    LatticeFFT::cfft2d(*lattice,false);
    1238             :     //
    1239             :     // Retain the double precision grid for FFT as well.  Convert it
    1240             :     // to single precision just after (since images are still single
    1241             :     // precision).
    1242             :     //
    1243           1 :     if(useDoubleGrid_p)
    1244             :       {
    1245           0 :         ArrayLattice<DComplex> darrayLattice(griddedData2);
    1246             :         
    1247           0 :         LatticeFFT::cfft2d(darrayLattice,false);
    1248           0 :         griddedData.resize(griddedData2.shape());
    1249           0 :         convertArray(griddedData, griddedData2);
    1250             : 
    1251           0 :         SynthesisUtilMethods::getResource("mem peak in getImage");
    1252             :         
    1253             :         //Don't need the double-prec grid anymore...
    1254           0 :         griddedData2.resize();
    1255           0 :         arrayLattice = new ArrayLattice<Complex>(griddedData);
    1256           0 :         lattice=arrayLattice;
    1257           0 :       }
    1258             :     else{
    1259           1 :       arrayLattice = new ArrayLattice<Complex>(griddedData);
    1260             :       //storeArrayAsImage(String("cgrid_ft.im"), image->coordinates(), griddedData);
    1261           1 :       lattice=arrayLattice;
    1262           1 :       LatticeFFT::cfft2d(*lattice,false);
    1263             :     }
    1264             : 
    1265             :     
    1266             :     
    1267             :     {
    1268           1 :       Int inx = lattice->shape()(0);
    1269           1 :       Int iny = lattice->shape()(1);
    1270           1 :       Vector<Complex> correction(inx);
    1271           1 :       correction=Complex(1.0, 0.0);
    1272             :       // Do the Grid-correction
    1273           1 :       IPosition cursorShape(4, inx, 1, 1, 1);
    1274           1 :       IPosition axisPath(4, 0, 1, 2, 3);
    1275           1 :       LatticeStepper lsx(lattice->shape(), cursorShape, axisPath);
    1276           1 :       LatticeIterator<Complex> lix(*lattice, lsx);
    1277         101 :       for(lix.reset();!lix.atEnd();lix++) {
    1278         100 :         Int pol=lix.position()(2);
    1279         100 :         Int chan=lix.position()(3);
    1280         100 :         if(weights(pol, chan)!=0.0) {
    1281         100 :           gridder->correctX1D(correction, lix.position()(1));
    1282         100 :           lix.rwVectorCursor()/=correction;
    1283         100 :           if(normalize) {
    1284         100 :             Complex rnorm(Float(inx)*Float(iny)/weights(pol,chan));
    1285         100 :             lix.rwCursor()*=rnorm;
    1286             :           }
    1287             :           else {
    1288           0 :             Complex rnorm(Float(inx)*Float(iny));
    1289           0 :             lix.rwCursor()*=rnorm;
    1290             :           }
    1291             :         }
    1292             :         else {
    1293           0 :           lix.woCursor()=0.0;
    1294             :         }
    1295             :       }
    1296           1 :     }
    1297             : 
    1298           1 :     if(!isTiled) {
    1299             :       // Check the section from the image BEFORE converting to a lattice 
    1300           2 :       IPosition blc(4, (nx-image->shape()(0)+(nx%2==0))/2, (ny-image->shape()(1)+(ny%2==0))/2, 0, 0);
    1301           1 :       IPosition stride(4, 1);
    1302           2 :       IPosition trc(blc+image->shape()-stride);
    1303             :       // Do the copy
    1304           1 :       IPosition start(4, 0);
    1305           1 :       image->put(griddedData(blc, trc));
    1306           1 :     }
    1307             :   }
    1308             : 
    1309           1 :   image->flush();
    1310           1 :   image->clearCache();
    1311             : 
    1312           1 :   if(!arrayLattice.null()) arrayLattice=0;
    1313           1 :   if(!lattice.null()) lattice=0;
    1314           1 :   griddedData.resize();
    1315             : 
    1316           1 :   return *image;
    1317             : }
    1318             : 
    1319             : // Get weight image
    1320           0 : void GridFT::getWeightImage(ImageInterface<Float>& weightImage, Matrix<Float>& weights) 
    1321             : {
    1322             : 
    1323           0 :   logIO() << LogOrigin("GridFT", "getWeightImage") << LogIO::NORMAL;
    1324             : 
    1325           0 :   weights.resize(sumWeight.shape());
    1326           0 :   convertArray(weights,sumWeight);
    1327             : 
    1328           0 :   const IPosition latticeShape = weightImage.shape();
    1329             : 
    1330           0 :   Int nx=latticeShape(0);
    1331           0 :   Int ny=latticeShape(1);
    1332             : 
    1333           0 :   IPosition loc(2, 0);
    1334           0 :   IPosition cursorShape(4, nx, ny, 1, 1);
    1335           0 :   IPosition axisPath(4, 0, 1, 2, 3);
    1336           0 :   LatticeStepper lsx(latticeShape, cursorShape, axisPath);
    1337           0 :   LatticeIterator<Float> lix(weightImage, lsx);
    1338           0 :   for(lix.reset();!lix.atEnd();lix++) {
    1339           0 :     Int pol=lix.position()(2);
    1340           0 :     Int chan=lix.position()(3);
    1341           0 :     lix.rwCursor()=weights(pol,chan);
    1342             :   }
    1343           0 : }
    1344             : 
    1345           0 : Bool GridFT::toRecord(String& error,
    1346             :                       RecordInterface& outRec, Bool withImage, const String diskimage)
    1347             : {
    1348             : 
    1349             :   
    1350             : 
    1351             :   // Save the current GridFT object to an output state record
    1352           0 :   Bool retval = true;
    1353           0 :   Float elpadd=padding_p;
    1354           0 :   if(toVis_p && withImage)
    1355           0 :     elpadd=1.0;
    1356             :   //save the base class variables
    1357           0 :   if(!FTMachine::toRecord(error, outRec, withImage, diskimage))
    1358           0 :     return false;
    1359             : 
    1360             :   //a call to init  will redo imagecache and gridder
    1361             :   // so no need to save these
    1362             : 
    1363           0 :   outRec.define("cachesize", Int64(cachesize));
    1364           0 :   outRec.define("tilesize", tilesize);
    1365           0 :   outRec.define("convtype", convType);
    1366           0 :   outRec.define("uvscale", uvScale);
    1367           0 :   outRec.define("uvoffset", uvOffset);
    1368           0 :   outRec.define("istiled", isTiled);
    1369           0 :   outRec.define("maxabsdata", maxAbsData);
    1370           0 :   Vector<Int> center_loc(4), offset_loc(4);
    1371           0 :   for (Int k=0; k<4 ; k++){
    1372           0 :     center_loc(k)=centerLoc(k);
    1373           0 :     offset_loc(k)=offsetLoc(k);
    1374             :   }
    1375           0 :   outRec.define("centerloc", center_loc);
    1376           0 :   outRec.define("offsetloc", offset_loc);
    1377           0 :   outRec.define("padding", elpadd);
    1378           0 :   outRec.define("usezero", usezero_p);
    1379           0 :   outRec.define("nopadding", noPadding_p);
    1380           0 :   return retval;
    1381           0 : }
    1382             : 
    1383           0 : Bool GridFT::fromRecord(String& error,
    1384             :                         const RecordInterface& inRec)
    1385             : {
    1386           0 :   Bool retval = true;
    1387           0 :   if(!FTMachine::fromRecord(error, inRec))
    1388           0 :     return false;
    1389           0 :   gridder=0; imageCache=0; lattice=0; arrayLattice=0;
    1390             :   //For some reason int64 seems to be getting lost...
    1391             :   //this is not an important parameter...so filing a jira 
    1392           0 :   if(inRec.isDefined("cachesize"))
    1393           0 :     cachesize=inRec.asInt64("cachesize");
    1394             :   else
    1395           0 :     cachesize=1000000;
    1396           0 :   inRec.get("tilesize", tilesize);
    1397           0 :   inRec.get("convtype", convType);
    1398           0 :   inRec.get("uvscale", uvScale);
    1399           0 :   inRec.get("uvoffset", uvOffset);
    1400           0 :   inRec.get("istiled", isTiled);
    1401           0 :   inRec.get("maxabsdata", maxAbsData);
    1402           0 :   Vector<Int> center_loc(4), offset_loc(4);
    1403           0 :   inRec.get("centerloc", center_loc);
    1404           0 :   inRec.get("offsetloc", offset_loc);
    1405           0 :   uInt ndim4 = 4;
    1406           0 :   centerLoc=IPosition(ndim4, center_loc(0), center_loc(1), center_loc(2), 
    1407           0 :                       center_loc(3));
    1408           0 :   offsetLoc=IPosition(ndim4, offset_loc(0), offset_loc(1), offset_loc(2), 
    1409           0 :                       offset_loc(3));
    1410           0 :   inRec.get("padding", padding_p);
    1411           0 :   inRec.get("usezero", usezero_p);
    1412           0 :   inRec.get("nopadding", noPadding_p);
    1413             : 
    1414           0 :   machineName_p="GridFT";
    1415             :   ///setup some of the parameters
    1416           0 :   init();
    1417             :   /*if(!cmplxImage_p.null()){
    1418             :     //FTMachine::fromRecord would have recovered the image
    1419             :     // Might be changing the shape of sumWeight
    1420             : 
    1421             :     if(isTiled) {
    1422             :       lattice=CountedPtr<Lattice<Complex> >(image, false);
    1423             :     }
    1424             :     else {
    1425             :       // Make the grid the correct shape and turn it into an array lattice
    1426             :       // Check the section from the image BEFORE converting to a lattice 
    1427             :       if(!toVis_p){
    1428             :         IPosition gridShape(4, nx, ny, npol, nchan);
    1429             :         griddedData.resize(gridShape);
    1430             :         griddedData=Complex(0.0);
    1431             :       }
    1432             :       else{
    1433             :         prepGridForDegrid();
    1434             :       }
    1435             :     }
    1436             :     };*/
    1437           0 :   return retval;
    1438           0 : }
    1439             : 
    1440         401 : void GridFT::ok() {
    1441         401 :   AlwaysAssert(image, AipsError);
    1442         401 : }
    1443             : 
    1444             : // Make a plain straightforward honest-to-God image. This returns
    1445             : // a complex image, without conversion to Stokes. The representation
    1446             : // is that required for the visibilities.
    1447             : //----------------------------------------------------------------------
    1448           0 : void GridFT::makeImage(FTMachine::Type type, 
    1449             :                        VisSet& vs,
    1450             :                        ImageInterface<Complex>& theImage,
    1451             :                        Matrix<Float>& weight) {
    1452             : 
    1453             : 
    1454           0 :   logIO() << LogOrigin("GridFT", "makeImage") << LogIO::NORMAL;
    1455             : 
    1456           0 :   if(type==FTMachine::COVERAGE) {
    1457           0 :     logIO() << "Type COVERAGE not defined for Fourier transforms" << LogIO::EXCEPTION;
    1458             :   }
    1459             : 
    1460             : 
    1461             :   // Initialize the gradients
    1462           0 :   ROVisIter& vi(vs.iter());
    1463             : 
    1464             :   // Loop over all visibilities and pixels
    1465           0 :   VisBuffer vb(vi);
    1466             :   
    1467             :   // Initialize put (i.e. transform to Sky) for this model
    1468           0 :   vi.origin();
    1469             : 
    1470           0 :   if(vb.polFrame()==MSIter::Linear) {
    1471           0 :     StokesImageUtil::changeCStokesRep(theImage, StokesImageUtil::LINEAR);
    1472             :   }
    1473             :   else {
    1474           0 :     StokesImageUtil::changeCStokesRep(theImage, StokesImageUtil::CIRCULAR);
    1475             :   }
    1476             :   
    1477           0 :   initializeToSky(theImage,weight,vb);
    1478             : 
    1479             :   // Loop over the visibilities, putting VisBuffers
    1480           0 :   for (vi.originChunks();vi.moreChunks();vi.nextChunk()) {
    1481           0 :     for (vi.origin(); vi.more(); vi++) {
    1482             :       
    1483           0 :       switch(type) {
    1484           0 :       case FTMachine::RESIDUAL:
    1485           0 :         vb.visCube()=vb.correctedVisCube();
    1486           0 :         vb.visCube()-=vb.modelVisCube();
    1487           0 :         put(vb, -1, false);
    1488           0 :         break;
    1489           0 :       case FTMachine::MODEL:
    1490           0 :         vb.visCube()=vb.modelVisCube();
    1491           0 :         put(vb, -1, false);
    1492           0 :         break;
    1493           0 :       case FTMachine::CORRECTED:
    1494           0 :         vb.visCube()=vb.correctedVisCube();
    1495           0 :         put(vb, -1, false);
    1496           0 :         break;
    1497           0 :       case FTMachine::PSF:
    1498           0 :         vb.visCube()=Complex(1.0,0.0);
    1499           0 :         put(vb, -1, true);
    1500           0 :         break;
    1501           0 :       case FTMachine::OBSERVED:
    1502             :       default:
    1503           0 :         put(vb, -1, false);
    1504           0 :         break;
    1505             :       }
    1506             :     }
    1507             :   }
    1508           0 :   finalizeToSky();
    1509             :   // Normalize by dividing out weights, etc.
    1510           0 :   getImage(weight, true);
    1511           0 : }
    1512             : 
    1513           0 : String GridFT::name() const {
    1514             : 
    1515           0 :   return machineName_p;
    1516             : 
    1517             : 
    1518             : }
    1519             : 
    1520             : } //# NAMESPACE CASA - END
    1521             : 

Generated by: LCOV version 1.16