LCOV - code coverage report
Current view: top level - synthesis/MeasurementComponents - PBMosaicFT.cc (source / functions) Hit Total Coverage
Test: casacpp_coverage.info Lines: 0 435 0.0 %
Date: 2024-10-12 00:35:29 Functions: 0 13 0.0 %

          Line data    Source code
       1             : // -*- C++ -*-
       2             : //# PBMosaicFT.cc: Implementation of PBMosaicFT class
       3             : //# Copyright (C) 1997,1998,1999,2000,2001,2002,2003
       4             : //# Associated Universities, Inc. Washington DC, USA.
       5             : //#
       6             : //# This library is free software; you can redistribute it and/or modify it
       7             : //# under the terms of the GNU Library General Public License as published by
       8             : //# the Free Software Foundation; either version 2 of the License, or (at your
       9             : //# option) any later version.
      10             : //#
      11             : //# This library is distributed in the hope that it will be useful, but WITHOUT
      12             : //# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
      13             : //# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Library General Public
      14             : //# License for more details.
      15             : //#
      16             : //# You should have received a copy of the GNU Library General Public License
      17             : //# along with this library; if not, write to the Free Software Foundation,
      18             : //# Inc., 675 Massachusetts Ave, Cambridge, MA 02139, USA.
      19             : //#
      20             : //# Correspondence concerning AIPS++ should be addressed as follows:
      21             : //#        Internet email: casa-feedback@nrao.edu.
      22             : //#        Postal address: AIPS++ Project Office
      23             : //#                        National Radio Astronomy Observatory
      24             : //#                        520 Edgemont Road
      25             : //#                        Charlottesville, VA 22903-2475 USA
      26             : //#
      27             : //# $Id$
      28             : 
      29             : #include <msvis/MSVis/VisibilityIterator.h>
      30             : #include <casacore/casa/Quanta/UnitMap.h>
      31             : #include <casacore/casa/Quanta/MVTime.h>
      32             : #include <casacore/casa/Quanta/UnitVal.h>
      33             : #include <casacore/measures/Measures/Stokes.h>
      34             : #include <casacore/coordinates/Coordinates/CoordinateSystem.h>
      35             : #include <casacore/coordinates/Coordinates/DirectionCoordinate.h>
      36             : #include <casacore/coordinates/Coordinates/SpectralCoordinate.h>
      37             : #include <casacore/coordinates/Coordinates/StokesCoordinate.h>
      38             : #include <casacore/coordinates/Coordinates/Projection.h>
      39             : #include <casacore/ms/MeasurementSets/MSColumns.h>
      40             : #include <casacore/ms/MeasurementSets/MSRange.h>
      41             : #include <casacore/ms/MSSel/MSSelection.h>
      42             : #include <casacore/casa/BasicSL/Constants.h>
      43             : #include <casacore/scimath/Mathematics/FFTServer.h>
      44             : #include <synthesis/MeasurementComponents/PBMosaicFT.h>
      45             : #include <casacore/scimath/Mathematics/RigidVector.h>
      46             : #include <msvis/MSVis/StokesVector.h>
      47             : #include <synthesis/TransformMachines/StokesImageUtil.h>
      48             : #include <msvis/MSVis/VisBuffer.h>
      49             : #include <msvis/MSVis/VisSet.h>
      50             : #include <casacore/images/Images/ImageInterface.h>
      51             : #include <casacore/images/Images/PagedImage.h>
      52             : #include <casacore/casa/Containers/Block.h>
      53             : #include <casacore/casa/Containers/Record.h>
      54             : #include <casacore/casa/Arrays/ArrayLogical.h>
      55             : #include <casacore/casa/Arrays/ArrayMath.h>
      56             : #include <casacore/casa/Arrays/Array.h>
      57             : #include <casacore/casa/Arrays/MaskedArray.h>
      58             : #include <casacore/casa/Arrays/Vector.h>
      59             : #include <casacore/casa/Arrays/Slice.h>
      60             : #include <casacore/casa/Arrays/Matrix.h>
      61             : #include <casacore/casa/Arrays/Cube.h>
      62             : #include <casacore/casa/Arrays/MatrixIter.h>
      63             : #include <casacore/casa/BasicSL/String.h>
      64             : #include <casacore/casa/Utilities/Assert.h>
      65             : #include <casacore/casa/Exceptions/Error.h>
      66             : #include <casacore/lattices/Lattices/ArrayLattice.h>
      67             : #include <casacore/lattices/Lattices/SubLattice.h>
      68             : #include <casacore/lattices/LRegions/LCBox.h>
      69             : #include <casacore/lattices/LEL/LatticeExpr.h>
      70             : #include <casacore/lattices/Lattices/LatticeCache.h>
      71             : #include <casacore/lattices/LatticeMath/LatticeFFT.h>
      72             : #include <casacore/lattices/Lattices/LatticeIterator.h>
      73             : #include <casacore/lattices/Lattices/LatticeStepper.h>
      74             : #include <casacore/casa/Utilities/CompositeNumber.h>
      75             : #include <casacore/casa/OS/Timer.h>
      76             : #include <casacore/casa/OS/HostInfo.h>
      77             : #include <sstream>
      78             : #include <casacore/images/Regions/WCBox.h>
      79             : #include <casacore/images/Images/SubImage.h>
      80             : #include <casacore/images/Regions/ImageRegion.h>
      81             : #include <casacore/images/Images/ImageSummary.h>
      82             : #include <casacore/casa/BasicMath/Random.h>
      83             : 
      84             : #include <synthesis/MeasurementComponents/PBMosaicFT.h>
      85             : //#include <synthesis/MeasurementComponents/GlobalFTMachineCallbacks.h>
      86             : #include <casacore/casa/System/ProgressMeter.h>
      87             : 
      88             : #define DELTAPA 1.0
      89             : #define MAGICPAVALUE -999.0
      90             : #define CONVSIZE (1024*4)
      91             : #define OVERSAMPLING 20
      92             : #define USETABLES 0           // If equal to 1, use tabulated exp() and
      93             :                               // complex exp() functions.
      94             : #define MAXPOINTINGERROR 250.0 // Max. pointing error in arcsec used to
      95             : // determine the resolution of the
      96             : // tabulated exp() function.
      97             : using namespace casacore;
      98             : namespace casa { //# NAMESPACE CASA - BEGIN
      99             :   //
     100             :   //---------------------------------------------------------------
     101             :   //
     102             : #define FUNC(a)  (sqrt((a)))
     103           0 :   PBMosaicFT::PBMosaicFT(MeasurementSet& /*ms*/, 
     104             :                          Int nWPlanes, Long icachesize, 
     105             :                          String& cfCacheDirName,
     106             :                          Bool applyPointingOffset,
     107             :                          Bool doPBCorr,
     108             :                          Int itilesize, 
     109             :                          Float paSteps,
     110             :                          Float pbLimit,
     111           0 :                          Bool usezero)
     112             :     ////: nPBWProjectFT(ms,nWPlanes,icachesize,cfCacheDirName,applyPointingOffset,doPBCorr,itilesize,paSteps,pbLimit,usezero),
     113             :     : nPBWProjectFT(nWPlanes,icachesize,cfCacheDirName,applyPointingOffset,doPBCorr,itilesize,paSteps,pbLimit,usezero),
     114           0 :       fieldIds_p(0)
     115             :   {
     116             :     //
     117             :     // Set the function pointer for FORTRAN call for GCF services.  
     118             :     // This is a pure C function pointer which FORTRAN can call.  
     119             :     // The function itself uses GCF object services.
     120             :     //
     121           0 :     epJ=NULL;  // We do not yet support antenna pointing error
     122             :                // handling in this FTMachine.
     123           0 :     convSize=0;
     124           0 :     tangentSpecified_p=false;
     125           0 :     lastIndex_p=0;
     126           0 :     paChangeDetector.reset();
     127           0 :     pbLimit_p=pbLimit;
     128             :     //
     129             :     // Get various parameters from the visibilities.  
     130             :     //
     131             :     //bandID_p = getVisParams();
     132           0 :     if (applyPointingOffset) doPointing=1; else doPointing=0;
     133             : 
     134           0 :     convFuncCacheReady=false;
     135           0 :     PAIndex = -1;
     136           0 :     maxConvSupport=-1;  
     137             :     //
     138             :     // Set up the Conv. Func. disk cache manager object.
     139             :     //
     140           0 :     cfCache.setCacheDir(cfCacheDirName.data());
     141           0 :     cfCache.initCache();
     142           0 :     convSampling=OVERSAMPLING;
     143           0 :     convSize=CONVSIZE;
     144             :     //use memory size defined in aipsrc if exists
     145           0 :     Long hostRAM = (HostInfo::memoryTotal(true)*1024); // In bytes
     146           0 :     hostRAM = hostRAM/(sizeof(Float)*2); // In complex pixels
     147           0 :     if (cachesize > hostRAM) cachesize=hostRAM;
     148             : 
     149             :     // MSFieldColumns msfc(ms.field());
     150             :     // MSRange msr(ms);
     151             :     // //
     152             :     // // An array of shape [2,1,1]!
     153             :     // //
     154             :     // fieldIds_p = msr.range(MSS::FIELD_ID).asArrayInt(RecordFieldId(0));
     155           0 :     nApertures = 0;
     156           0 :     lastPAUsedForWtImg = MAGICPAVALUE;
     157           0 :   }
     158             :   //
     159             :   //---------------------------------------------------------------
     160             :   //
     161           0 :   PBMosaicFT::PBMosaicFT(const RecordInterface& stateRec)
     162           0 :     : nPBWProjectFT(stateRec)
     163             :   {
     164             :     // Construct from the input state record
     165           0 :     String error;
     166             :     
     167           0 :     if (!fromRecord(error, stateRec)) {
     168           0 :       throw (AipsError("Failed to create PBMosaicFT: " + error));
     169             :     };
     170             :     //    bandID_p = getVisParams();
     171           0 :     PAIndex = -1;
     172           0 :     maxConvSupport=-1;
     173           0 :     convSampling=OVERSAMPLING;
     174           0 :     convSize=CONVSIZE;
     175           0 :     nApertures = 0;
     176           0 :   }
     177             :   //
     178             :   //---------------------------------------------------------------
     179             :   //
     180           0 :   PBMosaicFT& PBMosaicFT::operator=(const PBMosaicFT& other)
     181             :   {
     182           0 :     if(this!=&other) {
     183           0 :       nPBWProjectFT::operator=(other);
     184           0 :       padding_p=other.padding_p;
     185             :       //      ms_p=other.ms_p;
     186           0 :       nWPlanes_p=other.nWPlanes_p;
     187           0 :       imageCache=other.imageCache;
     188           0 :       cachesize=other.cachesize;
     189           0 :       tilesize=other.tilesize;
     190           0 :       gridder=other.gridder;
     191           0 :       isTiled=other.isTiled;
     192           0 :       lattice=other.lattice;
     193           0 :       arrayLattice=other.arrayLattice;
     194           0 :       maxAbsData=other.maxAbsData;
     195           0 :       centerLoc=other.centerLoc;
     196           0 :       offsetLoc=other.offsetLoc;
     197           0 :       mspc=other.mspc;
     198           0 :       msac=other.msac;
     199           0 :       pointingToImage=other.pointingToImage;
     200           0 :       usezero_p=other.usezero_p;
     201           0 :       doPBCorrection = other.doPBCorrection;
     202           0 :       maxConvSupport= other.maxConvSupport;
     203           0 :       nApertures = other.nApertures;
     204             :     };
     205           0 :     return *this;
     206             :   };
     207             :   //
     208             :   //----------------------------------------------------------------------
     209             :   //
     210             : //   PBMosaicFT::PBMosaicFT(const PBMosaicFT& other)
     211             : //   {
     212             : //     operator=(other);
     213             : //   }
     214             :   //
     215             :   //---------------------------------------------------------------
     216             :   //
     217           0 :   Int PBMosaicFT::findPointingOffsets(const VisBuffer& vb, 
     218             :                                         Array<Float> &l_off,
     219             :                                         Array<Float> &m_off,
     220             :                                         Bool Evaluate)
     221             :   {
     222             :     //
     223             :     // Get the antenna pointing errors, if any.
     224           0 :     Int NAnt=0;
     225             :     //
     226             :     // This will return 0 if EPJ Table is not given.  Otherwise will
     227             :     // return the number of antennas it detected (from the EPJ table)
     228             :     // and the offsets in l_off and m_off.
     229             :     //
     230           0 :     NAnt = nPBWProjectFT::findPointingOffsets(vb,l_off,m_off,Evaluate);
     231             :     //    NAnt = l_off.shape()(2);
     232             :     
     233             :     // Resize the offset arrays if no pointing table was given.
     234             :     //
     235           0 :     if (NAnt <=0 )
     236             :       {
     237           0 :         NAnt=vb.msColumns().antenna().nrow();
     238           0 :         l_off.resize(IPosition(3,1,1,NAnt)); // Poln x NChan x NAnt 
     239           0 :         m_off.resize(IPosition(3,1,1,NAnt)); // Poln x NChan x NAnt 
     240           0 :         l_off = m_off = 0.0; 
     241             :       }
     242             :     //
     243             :     // Add field offsets to the pointing errors.
     244             :     //
     245             : 
     246             : //     Float dayHr=2*3.141592653589793116;
     247             : //     MVDirection ref(directionCoord.referenceValue()(0),
     248             : //                  directionCoord.referenceValue()(1)),
     249             : //       vbDir(vb.direction1()(0).getAngle().getValue()(0),
     250             : //          vb.direction1()(0).getAngle().getValue()(1));
     251             :     
     252             : //     if (0)
     253             : //       {
     254             : //      l_off = l_off - (Float)(directionCoord.referenceValue()(0) -
     255             : //                              dayHr-vb.direction1()(0).getAngle().getValue()(0));
     256             : //      m_off = m_off - (Float)(directionCoord.referenceValue()(1) -
     257             : //                              vb.direction1()(0).getAngle().getValue()(1));
     258             : //       }
     259             : 
     260             :     //
     261             :     // Convert the direction from image co-ordinate system and the VB
     262             :     // to MDirection.  Then convert the MDirection to Quantity so that
     263             :     // arithematic operation (subtraction) can be done.  Then use the
     264             :     // subtracted Quantity to construct another MDirection and use
     265             :     // *it's* getAngle().getValue() to extract the difference in the
     266             :     // sky direction (from image co-ordinate system) and the phase
     267             :     // center direction of the VB in radians!  
     268             :     //
     269             :     // If only VisBuffer, and DirectionCoordinate class could return
     270             :     // MDirection, and MDirection class had operator-(), the code
     271             :     // below could look more readable as:
     272             :     //  MDirection diff=vb.mDirection()-directionCoord.mDirection();
     273             :     // 
     274           0 :     MDirection vbMDir(vb.direction1()(0)),skyMDir, diff;
     275           0 :     directionCoord.toWorld(skyMDir, directionCoord.referencePixel());
     276           0 :     diff = MDirection(skyMDir.getAngle()-vbMDir.getAngle());
     277           0 :     l_off = l_off - (Float)diff.getAngle().getValue()(0);
     278           0 :     m_off = m_off - (Float)diff.getAngle().getValue()(1);
     279             : 
     280             :     static int firstPass=0;
     281             :     //    static int fieldID=-1;
     282           0 :     static Vector<Float> offsets0,offsets1;
     283           0 :     if (firstPass==0)
     284             :       {
     285           0 :         offsets0.resize(NAnt);
     286           0 :         offsets1.resize(NAnt);
     287             : //      MLCG mlcg((Int)(vb.time()(0)));
     288             : //      Normal nrand(&mlcg,0.0,10.0);
     289             : //      for(Int i=0;i<NAnt;i++) offsets0(i) = (Float)(nrand());
     290             : //      for(Int i=0;i<NAnt;i++) offsets1(i) = (Float)(nrand());
     291           0 :         offsets0 = offsets1 = 0.0;
     292             :       }
     293           0 :     for(Int i=0;i<NAnt;i++)
     294             :       {
     295           0 :         l_off(IPosition(3,0,0,i)) = l_off(IPosition(3,0,0,i)) + offsets0(i)/2.062642e+05;
     296           0 :         m_off(IPosition(3,0,0,i)) = m_off(IPosition(3,0,0,i)) + offsets1(i)/2.062642e+05;
     297             :       }
     298             : 
     299             :     //m_off=l_off=0.0;
     300             : //     if (fieldID != vb.fieldId())
     301             : //       {
     302             : //      fieldID = vb.fieldId();
     303             : //      cout << l_off*2.062642e5 << endl;
     304             : //      cout << m_off*2.062642e5 << endl;
     305             : //       }
     306           0 :     if (firstPass==0) 
     307             :       {
     308             : //       cout << (Float)(directionCoord.referenceValue()(0)) << " "
     309             : //            << (Float)(directionCoord.referenceValue()(1)) << endl;
     310             : //       cout << vb.direction1()(0).getAngle().getValue()(0) << " "
     311             : //            << vb.direction1()(0).getAngle().getValue()(1) << endl;
     312             : //      cout << l_off << endl;
     313             : //      cout << m_off << endl;
     314             :        }
     315           0 :      firstPass++;
     316           0 :     return NAnt;
     317           0 :   }
     318             :   //
     319             :   //---------------------------------------------------------------
     320             :   //
     321           0 :   void PBMosaicFT::normalizeAvgPB()
     322             :   {
     323             :     // We accumulated normalized PBs.  So don't normalize the average
     324             :     // PB.
     325           0 :     pbNormalized = false;
     326             :     
     327           0 :   }
     328             :   //
     329             :   //---------------------------------------------------------------
     330             :   //
     331           0 :   Bool PBMosaicFT::makeAveragePB0(const VisBuffer& /*vb*/, 
     332             :                                   const ImageInterface<Complex>& image,
     333             :                                   Int& /*polInUse*/,
     334             :                                   TempImage<Float>& theavgPB)
     335             :   {
     336           0 :     Bool pbMade=false;
     337           0 :     if (!resetPBs) return pbMade;
     338             :     //
     339             :     // If this is the first time, resize the average PB
     340             :     //
     341           0 :     if (resetPBs)
     342             :       {
     343           0 :         theavgPB.resize(image.shape()); 
     344           0 :         theavgPB.setCoordinateInfo(image.coordinates());
     345           0 :         theavgPB.set(0.0);
     346           0 :         noOfPASteps = 1;
     347           0 :         pbPeaks.resize(theavgPB.shape()(2));
     348           0 :         pbPeaks.set(0.0);
     349           0 :         resetPBs=false;
     350           0 :         pbNormalized=false;
     351             :       }
     352           0 :     return pbMade;
     353             :   }
     354             :   //
     355             :   //--------------------------------------------------------------------------------
     356             :   //
     357           0 :   void PBMosaicFT::normalizePB(ImageInterface<Float>& /*pb*/, const Float& /*peakValue*/)
     358             :   {
     359           0 :   }
     360             :   //
     361             :   //---------------------------------------------------------------
     362             :   //
     363             :   // Finalize the FFT to the Sky. Here we actually do the FFT and
     364             :   // return the resulting image
     365             :   //
     366             :   // A specialization exists here only to not normalize by the avgPB.
     367             :   //
     368           0 :   ImageInterface<Complex>& PBMosaicFT::getImage(Matrix<Float>& weights,
     369             :                                                   Bool normalize) 
     370             :   {
     371             :     //AlwaysAssert(lattice, AipsError);
     372           0 :     AlwaysAssert(image, AipsError);
     373             :     
     374           0 :     logIO() << "#########getimage########" << LogIO::DEBUGGING << LogIO::POST;
     375             :     
     376           0 :     logIO() << LogOrigin("PBMosaicFT", "getImage") << LogIO::NORMAL;
     377             :     
     378           0 :     weights.resize(sumWeight.shape());
     379             :     
     380           0 :     convertArray(weights, sumWeight);
     381             :     //    cerr << "Sum Wt = " << sumWeight << endl;
     382             :     //  
     383             :     // If the weights are all zero then we cannot normalize otherwise
     384             :     // we don't care.
     385             :     //
     386           0 :     if(max(weights)==0.0) 
     387             :       {
     388           0 :         if(normalize) logIO() << LogIO::SEVERE
     389             :                               << "No useful data in PBMosaicFT: weights all zero"
     390           0 :                               << LogIO::POST;
     391             :         else logIO() << LogIO::WARN << "No useful data in PBMosaicFT: weights all zero"
     392           0 :                      << LogIO::POST;
     393             :       }
     394             :     else
     395             :       {
     396           0 :         const IPosition latticeShape = lattice->shape();
     397             :         
     398             :         logIO() << LogIO::DEBUGGING
     399           0 :                 << "Starting FFT and scaling of image" << LogIO::POST;
     400             :         //    
     401             :         // x and y transforms (lattice has the gridded vis.  Make the
     402             :         // dirty images)
     403             :         //
     404             :         // if (!makingPSF)
     405             :         //   {
     406             :         //     String name("griddedVis.im");
     407             :         //     image->put(griddedData);
     408             :         //     storeImg(name,*image);
     409             :         //   }
     410           0 :         LatticeFFT::cfft2d(*lattice,false);
     411           0 :         if (!avgPBReady)
     412             :           {
     413           0 :             avgPBReady=true;
     414           0 :             avgPB.resize(griddedWeights.shape()); 
     415           0 :             avgPB.setCoordinateInfo(griddedWeights.coordinates());
     416             :             //      pbNormalized=true;
     417             :             // {
     418             :             //   String name("cpb.im");
     419             :             //   storeImg(name,griddedWeights);
     420             :             // }
     421           0 :             makeSensitivityImage(griddedWeights, avgPB, weights, true);
     422             :             //
     423             :             // For effeciency reasons, weight functions are
     424             :             // accumulated only once per channel and polarization per
     425             :             // VB (i.e. for a given VB, if the weight functions are
     426             :             // accumulated for every channel and polarization, they
     427             :             // are not accumulated for the rest of VB).  This makes
     428             :             // the sum of weights for wegith functions different from
     429             :             // sum of weights for the visibility data and the
     430             :             // normalzation in makeSensitivityImage() will be
     431             :             // incorrect.  For now, normalize the peak of the average
     432             :             // weight function (wavgPB) to 1.0.
     433             :             //
     434           0 :             pbNormalized=false;
     435           0 :             nPBWProjectFT::normalizeAvgPB();
     436           0 :             resetPBs=false;
     437           0 :             cfCache.finalize(avgPB);
     438             :           }
     439             :         
     440             :         //
     441             :         // Apply the gridding correction
     442             :         //    
     443             :         {
     444             :           //      normalizeAvgPB();
     445           0 :           Int inx = lattice->shape()(0);
     446           0 :           Int iny = lattice->shape()(1);
     447           0 :           Vector<Complex> correction(inx);
     448             :           
     449           0 :           Vector<Float> sincConv(nx);
     450           0 :           Float centerX=nx/2+1;
     451           0 :           for (Int ix=0;ix<nx;ix++) 
     452             :             {
     453           0 :               Float x=C::pi*Float(ix-centerX)/(Float(nx)*Float(convSampling));
     454           0 :               if(ix==centerX) sincConv(ix)=1.0;
     455           0 :               else          sincConv(ix)=sin(x)/x;
     456             :             }
     457             :           
     458           0 :           IPosition cursorShape(4, inx, 1, 1, 1);
     459           0 :           IPosition axisPath(4, 0, 1, 2, 3);
     460           0 :           LatticeStepper lsx(lattice->shape(), cursorShape, axisPath);
     461           0 :           LatticeIterator<Complex> lix(*lattice, lsx);
     462             :           
     463           0 :           LatticeStepper lavgpb(avgPB.shape(),cursorShape,axisPath);
     464           0 :           LatticeIterator<Float> liavgpb(avgPB, lavgpb);
     465           0 :           Float peakAvgPB = max(avgPB.get());
     466           0 :           for(lix.reset(),liavgpb.reset();
     467           0 :               !lix.atEnd();
     468           0 :               lix++,liavgpb++) 
     469             :             {
     470           0 :               Int pol=lix.position()(2);
     471           0 :               Int chan=lix.position()(3);
     472             :               //              if(weights(pol, chan)>0.0) 
     473             :               {
     474           0 :                 Int iy=lix.position()(1);
     475           0 :                 gridder->correctX1D(correction,iy);
     476             :                   
     477           0 :                 Vector<Float> PBCorrection(liavgpb.rwVectorCursor().shape()),
     478           0 :                   avgPBVec(liavgpb.rwVectorCursor().shape());
     479             :                   
     480           0 :                 PBCorrection = liavgpb.rwVectorCursor();
     481           0 :                 avgPBVec = liavgpb.rwVectorCursor();
     482             :                   
     483           0 :                 sincConv=1.0;
     484           0 :                 if (!doPBCorrection)              avgPBVec=1.0;
     485             :                 //              avgPBVec=1.0;
     486           0 :                 for(int i=0;i<PBCorrection.shape();i++)
     487             :                   {
     488             :                     //
     489             :                     // This with PS functions
     490             :                     //
     491             :                     //                PBCorrection(i)=pbFunc(avgPBVec(i))*sincConv(i)*sincConv(iy);
     492             :                     //                //                      PBCorrection(i)=(avgPBVec(i))*sincConv(i)*sincConv(iy);
     493             :                     //                if ((abs(PBCorrection(i)*correction(i))) >= pbLimit_p)
     494             :                     //                  lix.rwVectorCursor()(i) /= PBCorrection(i)*correction(i); //*pbNorm
     495             :                     //                else 
     496             :                     //                  lix.rwVectorCursor()(i) /= correction(i)*sincConv(i)*sincConv(iy);//pbNorm;
     497             :                     //
     498             :                     // This without the PS functions
     499             :                     //
     500           0 :                     PBCorrection(i)=pbFunc(avgPBVec(i))*sincConv(i)*sincConv(iy);
     501           0 :                     if ((abs(PBCorrection(i))) >= pbLimit_p*peakAvgPB)
     502           0 :                       lix.rwVectorCursor()(i) /= PBCorrection(i);
     503           0 :                     else if (!makingPSF)
     504           0 :                       lix.rwVectorCursor()(i) /= sincConv(i)*sincConv(iy);
     505             :                   }
     506             : 
     507           0 :                 if(normalize) 
     508             :                   {
     509           0 :                     if(weights(pol, chan)>0.0) 
     510             :                       {
     511           0 :                         Complex rnorm(Float(inx)*Float(iny)/(weights(pol,chan)));
     512           0 :                         lix.rwCursor()*=rnorm;
     513             :                       }
     514             :                     else 
     515           0 :                       lix.woCursor()=0.0;
     516             :                   }
     517             :                 else 
     518             :                   {
     519           0 :                     Complex rnorm(Float(inx)*Float(iny));
     520           0 :                     lix.rwCursor()*=rnorm;
     521             :                   }
     522           0 :               }
     523             :             }
     524           0 :         }
     525             : 
     526           0 :         if(!isTiled) 
     527             :           {
     528             :             //
     529             :             // Check the section from the image BEFORE converting to a lattice 
     530             :             //
     531           0 :             IPosition blc(4, (nx-image->shape()(0))/2,
     532           0 :                           (ny-image->shape()(1))/2, 0, 0);
     533           0 :             IPosition stride(4, 1);
     534           0 :             IPosition trc(blc+image->shape()-stride);
     535             :             //
     536             :             // Do the copy
     537             :             //
     538           0 :             image->put(griddedData(blc, trc));
     539             :             //if(arrayLattice) delete arrayLattice; arrayLattice=0;
     540           0 :             griddedData.resize(IPosition(1,0));
     541           0 :           }
     542           0 :       }
     543             :         // if (!makingPSF)
     544             :         //   {
     545             :         //     String name("cdirty.im");
     546             :         //     image->put(griddedData);
     547             :         //     storeImg(name,*image);
     548             :         //   }
     549             : 
     550             :         
     551           0 :     return *image;
     552             :   }
     553             : 
     554             : 
     555             : #define NEED_UNDERSCORES
     556             : #if defined(NEED_UNDERSCORES)
     557             : #define gpbmos gpbmos_
     558             : #define dpbmos dpbmos_
     559             : #define dpbmosgrad dpbmosgrad_
     560             : #define dpbwgrad dpbwgrad_
     561             : #endif
     562             :   
     563             :   extern "C" { 
     564             :     void gpbmos(Double *uvw,
     565             :                 Double *dphase,
     566             :                 const Complex *values,
     567             :                 Int *nvispol,
     568             :                 Int *nvischan,
     569             :                 Int *dopsf,
     570             :                 const Int *flag,
     571             :                 const Int *rflag,
     572             :                 const Float *weight,
     573             :                 Int *nrow,
     574             :                 Int *rownum,
     575             :                 Double *scale,
     576             :                 Double *offset,
     577             :                 Complex *grid,
     578             :                 Int *nx,
     579             :                 Int *ny,
     580             :                 Int *npol,
     581             :                 Int *nchan,
     582             :                 const Double *freq,
     583             :                 const Double *c,
     584             :                 Int *support,
     585             :                 Int *convsize,
     586             :                 Int *convwtsize,
     587             :                 Int *sampling,
     588             :                 Int *wconvsize,
     589             :                 Complex *convfunc,
     590             :                 Int *chanmap,
     591             :                 Int *polmap,
     592             :                 Int *polused,
     593             :                 Double *sumwt,
     594             :                 Int *ant1,
     595             :                 Int *ant2,
     596             :                 Int *nant,
     597             :                 Int *scanno,
     598             :                 Double *sigma,
     599             :                 Float *raoff,
     600             :                 Float *decoff,
     601             :                 Double *area,
     602             :                 Int *doGrad,
     603             :                 Int *doPointingCorrection,
     604             :                 Int *nPA,
     605             :                 Int *paIndex,
     606             :                 Int *CFMap,
     607             :                 Int *ConjCFMap,
     608             :                 Double *currentCFPA, Double *actualPA,
     609             :                 Int *avgPBReady,
     610             :                 Complex *avgPB, Double *cfRefFreq_p,
     611             :                 Complex *convWeights,
     612             :                 Int *convWtSupport);
     613             :     void dpbmos(Double *uvw,
     614             :                 Double *dphase,
     615             :                 Complex *values,
     616             :                 Int *nvispol,
     617             :                 Int *nvischan,
     618             :                 const Int *flag,
     619             :                 const Int *rflag,
     620             :                 Int *nrow,
     621             :                 Int *rownum,
     622             :                 Double *scale,
     623             :                 Double *offset,
     624             :                 const Complex *grid,
     625             :                 Int *nx,
     626             :                 Int *ny,
     627             :                 Int *npol,
     628             :                 Int *nchan,
     629             :                 const Double *freq,
     630             :                 const Double *c,
     631             :                 Int *support,
     632             :                 Int *convsize,
     633             :                 Int *sampling,
     634             :                 Int *wconvsize,
     635             :                 Complex *convfunc,
     636             :                 Int *chanmap,
     637             :                 Int *polmap,
     638             :                 Int *polused,
     639             :                 Int *ant1, 
     640             :                 Int *ant2, 
     641             :                 Int *nant, 
     642             :                 Int *scanno,
     643             :                 Double *sigma, 
     644             :                 Float *raoff, Float *decoff,
     645             :                 Double *area, 
     646             :                 Int *dograd,
     647             :                 Int *doPointingCorrection,
     648             :                 Int *nPA,
     649             :                 Int *paIndex,
     650             :                 Int *CFMap,
     651             :                 Int *ConjCFMap,
     652             :                 Double *currentCFPA, Double *actualPA, Double *cfRefFreq_p);
     653             :     void dpbmosgrad(Double *uvw,
     654             :                   Double *dphase,
     655             :                   Complex *values,
     656             :                   Int *nvispol,
     657             :                   Int *nvischan,
     658             :                   Complex *gazvalues,
     659             :                   Complex *gelvalues,
     660             :                   Int *doconj,
     661             :                   const Int *flag,
     662             :                   const Int *rflag,
     663             :                   Int *nrow,
     664             :                   Int *rownum,
     665             :                   Double *scale,
     666             :                   Double *offset,
     667             :                   const Complex *grid,
     668             :                   Int *nx,
     669             :                   Int *ny,
     670             :                   Int *npol,
     671             :                   Int *nchan,
     672             :                   const Double *freq,
     673             :                   const Double *c,
     674             :                   Int *support,
     675             :                   Int *convsize,
     676             :                   Int *sampling,
     677             :                   Int *wconvsize,
     678             :                   Complex *convfunc,
     679             :                   Int *chanmap,
     680             :                   Int *polmap,
     681             :                   Int *polused,
     682             :                   Int *ant1, 
     683             :                   Int *ant2, 
     684             :                   Int *nant, 
     685             :                   Int *scanno,
     686             :                   Double *sigma, 
     687             :                   Float *raoff, Float *decoff,
     688             :                   Double *area, 
     689             :                   Int *dograd,
     690             :                   Int *doPointingCorrection,
     691             :                   Int *nPA,
     692             :                   Int *paIndex,
     693             :                   Int *CFMap,
     694             :                   Int *ConjCFMap,
     695             :                   Double *currentCFPA, Double *actualPA,Double *cfRefFreq_p);
     696             :   }
     697             :   //
     698             :   //----------------------------------------------------------------------
     699             :   //
     700           0 :   void PBMosaicFT::runFortranGet(Matrix<Double>& uvw,Vector<Double>& dphase,
     701             :                                  Cube<Complex>& visdata,
     702             :                                  IPosition& s,
     703             :                                  Int& /*Conj*/,
     704             :                                  Cube<Int>& flags,Vector<Int>& rowFlags,
     705             :                                  Int& rownr,Vector<Double>& actualOffset,
     706             :                                  Array<Complex>* dataPtr,
     707             :                                  Int& aNx, Int& aNy, Int& npol, Int& nchan,
     708             :                                  VisBuffer& vb,Int& Nant_p, Int& scanNo,
     709             :                                  Double& sigma,
     710             :                                  Array<Float>& l_off,
     711             :                                  Array<Float>& m_off,
     712             :                                  Double area,
     713             :                                  Int& doGrad,
     714             :                                  Int paIndex)
     715             :   {
     716             :     enum whichGetStorage {RAOFF,DECOFF,UVW,DPHASE,VISDATA,GRADVISAZ,GRADVISEL,
     717             :                           FLAGS,ROWFLAGS,UVSCALE,ACTUALOFFSET,DATAPTR,VBFREQ,
     718             :                           CONVSUPPORT,CONVFUNC,CHANMAP,POLMAP,VBANT1,VBANT2,CONJCFMAP,CFMAP};
     719           0 :     Vector<Bool> deleteThem(21);
     720             :     
     721             :     Double *uvw_p, *dphase_p, *actualOffset_p, *vb_freq_p, *uvScale_p;
     722             :     Complex *visdata_p, *dataPtr_p, *f_convFunc_p;
     723             :     Int *flags_p, *rowFlags_p, *chanMap_p, *polMap_p, *convSupport_p, *vb_ant1_p, *vb_ant2_p,
     724             :       *ConjCFMap_p, *CFMap_p;
     725             :     Float *l_off_p, *m_off_p;
     726             :     Double actualPA;
     727             :     
     728           0 :     Vector<Int> ConjCFMap, CFMap;
     729             :     Int N;
     730           0 :     actualPA = getVBPA(vb);
     731             : 
     732           0 :     N=polMap.nelements();
     733           0 :     CFMap = polMap; ConjCFMap = polMap;
     734           0 :     for(Int i=0;i<N;i++) CFMap[i] = polMap[N-i-1];
     735             :     
     736           0 :     Array<Complex> rotatedConvFunc;
     737             : //     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
     738             : //                                     rotatedConvFunc,(currentCFPA-actualPA),"LINEAR");
     739           0 :     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
     740             :                                        rotatedConvFunc,0.0);
     741             : 
     742           0 :     ConjCFMap = polMap;
     743           0 :     makeCFPolMap(vb,CFMap);
     744           0 :     makeConjPolMap(vb,CFMap,ConjCFMap);
     745             : 
     746             :     
     747           0 :     ConjCFMap_p     = ConjCFMap.getStorage(deleteThem(CONJCFMAP));
     748           0 :     CFMap_p         = CFMap.getStorage(deleteThem(CFMAP));
     749             :     
     750           0 :     uvw_p           = uvw.getStorage(deleteThem(UVW));
     751           0 :     dphase_p        = dphase.getStorage(deleteThem(DPHASE));
     752           0 :     visdata_p       = visdata.getStorage(deleteThem(VISDATA));
     753           0 :     flags_p         = flags.getStorage(deleteThem(FLAGS));
     754           0 :     rowFlags_p      = rowFlags.getStorage(deleteThem(ROWFLAGS));
     755           0 :     uvScale_p       = uvScale.getStorage(deleteThem(UVSCALE));
     756           0 :     actualOffset_p  = actualOffset.getStorage(deleteThem(ACTUALOFFSET));
     757           0 :     dataPtr_p       = dataPtr->getStorage(deleteThem(DATAPTR));
     758           0 :     vb_freq_p       = vb.frequency().getStorage(deleteThem(VBFREQ));
     759           0 :     convSupport_p   = convSupport.getStorage(deleteThem(CONVSUPPORT));
     760             :     //    f_convFunc_p      = convFunc.getStorage(deleteThem(CONVFUNC));
     761           0 :     f_convFunc_p      = rotatedConvFunc.getStorage(deleteThem(CONVFUNC));
     762           0 :     chanMap_p       = chanMap.getStorage(deleteThem(CHANMAP));
     763           0 :     polMap_p        = polMap.getStorage(deleteThem(POLMAP));
     764           0 :     vb_ant1_p       = vb.antenna1().getStorage(deleteThem(VBANT1));
     765           0 :     vb_ant2_p       = vb.antenna2().getStorage(deleteThem(VBANT2));
     766           0 :     l_off_p     = l_off.getStorage(deleteThem(RAOFF));
     767           0 :     m_off_p    = m_off.getStorage(deleteThem(DECOFF));
     768             : 
     769             : //     static int ttt=0;
     770             : //     if (ttt==0) cout << l_off(IPosition(3,0,0,0)) << " " << m_off(IPosition(3,0,0,0)) << endl;
     771             : //     ttt++;
     772             :     
     773           0 :     Int npa=convSupport.shape()(2),actualConvSize;
     774           0 :     Int paIndex_Fortran = paIndex;
     775           0 :     actualConvSize = convFunc.shape()(0);
     776             :     
     777           0 :     IPosition shp=convSupport.shape();
     778           0 :     Int alwaysDoPointing=1;
     779           0 :     alwaysDoPointing=doPointing;
     780           0 :     dpbmos(uvw_p,
     781             :            dphase_p,
     782             :            visdata_p,
     783           0 :            &s.asVector()(0),
     784           0 :            &s.asVector()(1),
     785             :            flags_p,
     786             :            rowFlags_p,
     787           0 :            &s.asVector()(2),
     788             :            &rownr,
     789             :            uvScale_p,
     790             :            actualOffset_p,
     791             :            dataPtr_p,
     792             :            &aNx,
     793             :            &aNy,
     794             :            &npol,
     795             :            &nchan,
     796             :            vb_freq_p,
     797             :            &C::c,
     798             :            convSupport_p,
     799             :            &actualConvSize,
     800             :            &convSampling,
     801             :            &wConvSize,
     802             :            f_convFunc_p,
     803             :            chanMap_p,
     804             :            polMap_p,
     805             :            &polInUse,
     806             :            vb_ant1_p,
     807             :            vb_ant2_p,
     808             :            &Nant_p,
     809             :            &scanNo,
     810             :            &sigma,
     811             :            l_off_p, m_off_p,
     812             :            &area,
     813             :            &doGrad,
     814             :            &alwaysDoPointing,
     815             :            &npa,
     816             :            &paIndex_Fortran,
     817             :            CFMap_p,
     818             :            ConjCFMap_p,
     819             :            &currentCFPA
     820             :            ,&actualPA, &cfRefFreq_p
     821             :            );
     822             :     
     823           0 :     ConjCFMap.freeStorage((const Int *&)ConjCFMap_p,deleteThem(CONJCFMAP));
     824           0 :     CFMap.freeStorage((const Int *&)CFMap_p,deleteThem(CFMAP));
     825             :     
     826           0 :     l_off.freeStorage((const Float*&)l_off_p,deleteThem(RAOFF));
     827           0 :     m_off.freeStorage((const Float*&)m_off_p,deleteThem(DECOFF));
     828           0 :     uvw.freeStorage((const Double*&)uvw_p,deleteThem(UVW));
     829           0 :     dphase.freeStorage((const Double*&)dphase_p,deleteThem(DPHASE));
     830           0 :     visdata.putStorage(visdata_p,deleteThem(VISDATA));
     831           0 :     flags.freeStorage((const Int*&) flags_p,deleteThem(FLAGS));
     832           0 :     rowFlags.freeStorage((const Int *&)rowFlags_p,deleteThem(ROWFLAGS));
     833           0 :     actualOffset.freeStorage((const Double*&)actualOffset_p,deleteThem(ACTUALOFFSET));
     834           0 :     dataPtr->freeStorage((const Complex *&)dataPtr_p,deleteThem(DATAPTR));
     835           0 :     uvScale.freeStorage((const Double*&) uvScale_p,deleteThem(UVSCALE));
     836           0 :     vb.frequency().freeStorage((const Double*&)vb_freq_p,deleteThem(VBFREQ));
     837           0 :     convSupport.freeStorage((const Int*&)convSupport_p,deleteThem(CONVSUPPORT));
     838           0 :     convFunc.freeStorage((const Complex *&)f_convFunc_p,deleteThem(CONVFUNC));
     839           0 :     chanMap.freeStorage((const Int*&)chanMap_p,deleteThem(CHANMAP));
     840           0 :     polMap.freeStorage((const Int*&) polMap_p,deleteThem(POLMAP));
     841           0 :     vb.antenna1().freeStorage((const Int*&) vb_ant1_p,deleteThem(VBANT1));
     842           0 :     vb.antenna2().freeStorage((const Int*&) vb_ant2_p,deleteThem(VBANT2));
     843           0 :   }
     844             :   //
     845             :   //----------------------------------------------------------------------
     846             :   //
     847           0 :   void PBMosaicFT::runFortranGetGrad(Matrix<Double>& uvw,Vector<Double>& dphase,
     848             :                                      Cube<Complex>& visdata,
     849             :                                      IPosition& s,
     850             :                                      Cube<Complex>& gradVisAzData,
     851             :                                      Cube<Complex>& gradVisElData,
     852             :                                      Int& Conj,
     853             :                                      Cube<Int>& flags,Vector<Int>& rowFlags,
     854             :                                      Int& rownr,Vector<Double>& actualOffset,
     855             :                                      Array<Complex>* dataPtr,
     856             :                                      Int& aNx, Int& aNy, Int& npol, Int& nchan,
     857             :                                      VisBuffer& vb,Int& Nant_p, Int& scanNo,
     858             :                                      Double& sigma,
     859             :                                      Array<Float>& l_off,
     860             :                                      Array<Float>& m_off,
     861             :                                      Double area,
     862             :                                      Int& doGrad,
     863             :                                      Int paIndex)
     864             :   {
     865             :     enum whichGetStorage {RAOFF,DECOFF,UVW,DPHASE,VISDATA,GRADVISAZ,GRADVISEL,
     866             :                           FLAGS,ROWFLAGS,UVSCALE,ACTUALOFFSET,DATAPTR,VBFREQ,
     867             :                           CONVSUPPORT,CONVFUNC,CHANMAP,POLMAP,VBANT1,VBANT2,CONJCFMAP,CFMAP};
     868           0 :     Vector<Bool> deleteThem(21);
     869             :     
     870             :     Double *uvw_p, *dphase_p, *actualOffset_p, *vb_freq_p, *uvScale_p;
     871             :     Complex *visdata_p, *dataPtr_p, *f_convFunc_p;
     872             :     Complex *gradVisAzData_p, *gradVisElData_p;
     873             :     Int *flags_p, *rowFlags_p, *chanMap_p, *polMap_p, *convSupport_p, *vb_ant1_p, *vb_ant2_p,
     874             :       *ConjCFMap_p, *CFMap_p;
     875             :     Float *l_off_p, *m_off_p;
     876             :     Double actualPA;
     877             : 
     878           0 :     Vector<Int> ConjCFMap, CFMap;
     879           0 :     actualPA = getVBPA(vb);
     880           0 :     ConjCFMap = polMap;
     881           0 :     makeCFPolMap(vb,CFMap);
     882           0 :     makeConjPolMap(vb,CFMap,ConjCFMap);
     883             : 
     884           0 :     Array<Complex> rotatedConvFunc;
     885             : //     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
     886             : //                                     rotatedConvFunc,(currentCFPA-actualPA));
     887           0 :     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
     888             :                                        rotatedConvFunc,0.0);
     889             : 
     890           0 :     ConjCFMap_p     = ConjCFMap.getStorage(deleteThem(CONJCFMAP));
     891           0 :     CFMap_p         = CFMap.getStorage(deleteThem(CFMAP));
     892             :     
     893           0 :     uvw_p           = uvw.getStorage(deleteThem(UVW));
     894           0 :     dphase_p        = dphase.getStorage(deleteThem(DPHASE));
     895           0 :     visdata_p       = visdata.getStorage(deleteThem(VISDATA));
     896           0 :     gradVisAzData_p = gradVisAzData.getStorage(deleteThem(GRADVISAZ));
     897           0 :     gradVisElData_p = gradVisElData.getStorage(deleteThem(GRADVISEL));
     898           0 :     flags_p         = flags.getStorage(deleteThem(FLAGS));
     899           0 :     rowFlags_p      = rowFlags.getStorage(deleteThem(ROWFLAGS));
     900           0 :     uvScale_p       = uvScale.getStorage(deleteThem(UVSCALE));
     901           0 :     actualOffset_p  = actualOffset.getStorage(deleteThem(ACTUALOFFSET));
     902           0 :     dataPtr_p       = dataPtr->getStorage(deleteThem(DATAPTR));
     903           0 :     vb_freq_p       = vb.frequency().getStorage(deleteThem(VBFREQ));
     904           0 :     convSupport_p   = convSupport.getStorage(deleteThem(CONVSUPPORT));
     905             :     //    f_convFunc_p      = convFunc.getStorage(deleteThem(CONVFUNC));
     906           0 :     f_convFunc_p      = rotatedConvFunc.getStorage(deleteThem(CONVFUNC));
     907           0 :     chanMap_p       = chanMap.getStorage(deleteThem(CHANMAP));
     908           0 :     polMap_p        = polMap.getStorage(deleteThem(POLMAP));
     909           0 :     vb_ant1_p       = vb.antenna1().getStorage(deleteThem(VBANT1));
     910           0 :     vb_ant2_p       = vb.antenna2().getStorage(deleteThem(VBANT2));
     911           0 :     l_off_p     = l_off.getStorage(deleteThem(RAOFF));
     912           0 :     m_off_p    = m_off.getStorage(deleteThem(DECOFF));
     913             :     
     914           0 :     Int npa=convSupport.shape()(2),actualConvSize;
     915           0 :     Int paIndex_Fortran = paIndex;
     916           0 :     actualConvSize = convFunc.shape()(0);
     917             :     
     918           0 :     IPosition shp=convSupport.shape();
     919           0 :     Int alwaysDoPointing=1;
     920           0 :     alwaysDoPointing = doPointing;
     921           0 :     dpbmosgrad(uvw_p,
     922             :              dphase_p,
     923             :              visdata_p,
     924           0 :              &s.asVector()(0),
     925           0 :              &s.asVector()(1),
     926             :              gradVisAzData_p,
     927             :              gradVisElData_p,
     928             :              &Conj,
     929             :              flags_p,
     930             :              rowFlags_p,
     931           0 :              &s.asVector()(2),
     932             :              &rownr,
     933             :              uvScale_p,
     934             :              actualOffset_p,
     935             :              dataPtr_p,
     936             :              &aNx,
     937             :              &aNy,
     938             :              &npol,
     939             :              &nchan,
     940             :              vb_freq_p,
     941             :              &C::c,
     942             :              convSupport_p,
     943             :              &actualConvSize,
     944             :              &convSampling,
     945             :              &wConvSize,
     946             :              f_convFunc_p,
     947             :              chanMap_p,
     948             :              polMap_p,
     949             :              &polInUse,
     950             :              vb_ant1_p,
     951             :              vb_ant2_p,
     952             :              &Nant_p,
     953             :              &scanNo,
     954             :              &sigma,
     955             :              l_off_p, m_off_p,
     956             :              &area,
     957             :              &doGrad,
     958             :              &alwaysDoPointing,
     959             :              &npa,
     960             :              &paIndex_Fortran,
     961             :              CFMap_p,
     962             :              ConjCFMap_p,
     963             :              &currentCFPA
     964             :              ,&actualPA,&cfRefFreq_p
     965             :              );
     966           0 :     ConjCFMap.freeStorage((const Int *&)ConjCFMap_p,deleteThem(CONJCFMAP));
     967           0 :     CFMap.freeStorage((const Int *&)CFMap_p,deleteThem(CFMAP));
     968             :     
     969           0 :     l_off.freeStorage((const Float*&)l_off_p,deleteThem(RAOFF));
     970           0 :     m_off.freeStorage((const Float*&)m_off_p,deleteThem(DECOFF));
     971           0 :     uvw.freeStorage((const Double*&)uvw_p,deleteThem(UVW));
     972           0 :     dphase.freeStorage((const Double*&)dphase_p,deleteThem(DPHASE));
     973           0 :     visdata.putStorage(visdata_p,deleteThem(VISDATA));
     974           0 :     gradVisAzData.putStorage(gradVisAzData_p,deleteThem(GRADVISAZ));
     975           0 :     gradVisElData.putStorage(gradVisElData_p,deleteThem(GRADVISEL));
     976           0 :     flags.freeStorage((const Int*&) flags_p,deleteThem(FLAGS));
     977           0 :     rowFlags.freeStorage((const Int *&)rowFlags_p,deleteThem(ROWFLAGS));
     978           0 :     actualOffset.freeStorage((const Double*&)actualOffset_p,deleteThem(ACTUALOFFSET));
     979           0 :     dataPtr->freeStorage((const Complex *&)dataPtr_p,deleteThem(DATAPTR));
     980           0 :     uvScale.freeStorage((const Double*&) uvScale_p,deleteThem(UVSCALE));
     981           0 :     vb.frequency().freeStorage((const Double*&)vb_freq_p,deleteThem(VBFREQ));
     982           0 :     convSupport.freeStorage((const Int*&)convSupport_p,deleteThem(CONVSUPPORT));
     983           0 :     convFunc.freeStorage((const Complex *&)f_convFunc_p,deleteThem(CONVFUNC));
     984           0 :     chanMap.freeStorage((const Int*&)chanMap_p,deleteThem(CHANMAP));
     985           0 :     polMap.freeStorage((const Int*&) polMap_p,deleteThem(POLMAP));
     986           0 :     vb.antenna1().freeStorage((const Int*&) vb_ant1_p,deleteThem(VBANT1));
     987           0 :     vb.antenna2().freeStorage((const Int*&) vb_ant2_p,deleteThem(VBANT2));
     988           0 :   }
     989             :   //
     990             :   //----------------------------------------------------------------------
     991             :   //
     992           0 :   void PBMosaicFT::runFortranPut(Matrix<Double>& uvw,Vector<Double>& dphase,
     993             :                                  const Complex& visdata,
     994             :                                  IPosition& s,
     995             :                                  Int& /*Conj*/,
     996             :                                  Cube<Int>& flags,Vector<Int>& rowFlags,
     997             :                                  const Matrix<Float>& weight,
     998             :                                  Int& rownr,Vector<Double>& actualOffset,
     999             :                                  Array<Complex>& dataPtr,
    1000             :                                  Int& aNx, Int& aNy, Int& npol, Int& nchan,
    1001             :                                  const VisBuffer& vb,Int& Nant_p, Int& scanNo,
    1002             :                                  Double& sigma,
    1003             :                                  Array<Float>& l_off,
    1004             :                                  Array<Float>& m_off,
    1005             :                                  Matrix<Double>& sumWeight,
    1006             :                                  Double& area,
    1007             :                                  Int& doGrad,
    1008             :                                  Int& doPSF,
    1009             :                                  Int paIndex)
    1010             :   {
    1011             :     enum whichGetStorage {RAOFF,DECOFF,UVW,DPHASE,VISDATA,GRADVISAZ,GRADVISEL,
    1012             :                           FLAGS,ROWFLAGS,UVSCALE,ACTUALOFFSET,DATAPTR,VBFREQ,
    1013             :                           CONVSUPPORT,CONVWTSUPPORT,CONVFUNC,CHANMAP,POLMAP,VBANT1,VBANT2,WEIGHT,
    1014             :                           SUMWEIGHT,CONJCFMAP,CFMAP,AVGPBPTR,CONVWTS};
    1015           0 :     Vector<Bool> deleteThem(25);
    1016             :     
    1017             :     Double *uvw_p, *dphase_p, *actualOffset_p, *vb_freq_p, *uvScale_p;
    1018             :     Complex *dataPtr_p, *f_convFunc_p, *f_convWts_p,*avgPBPtr;
    1019             :     Int *flags_p, *rowFlags_p, *chanMap_p, *polMap_p, *convSupport_p, *convWtSupport_p,
    1020             :       *vb_ant1_p, *vb_ant2_p,
    1021             :       *ConjCFMap_p, *CFMap_p;
    1022             :     Float *l_off_p, *m_off_p;
    1023             :     Float *weight_p;Double *sumwt_p,*isumwt_p;
    1024             :     Double actualPA;
    1025           0 :     const Complex *visdata_p=&visdata;
    1026             :     
    1027           0 :     Matrix<Double> iSumWt(sumWeight.shape());
    1028           0 :     iSumWt=0.0;
    1029           0 :     Vector<Int> ConjCFMap, CFMap;
    1030           0 :     actualPA = getVBPA(vb);
    1031             : 
    1032           0 :     ConjCFMap = polMap;
    1033           0 :     makeCFPolMap(vb,CFMap);
    1034           0 :     makeConjPolMap(vb,CFMap,ConjCFMap);
    1035             : 
    1036           0 :     Array<Complex> rotatedConvFunc;
    1037             : //     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
    1038             : //                                     rotatedConvFunc,(currentCFPA-actualPA));
    1039           0 :     SynthesisUtils::rotateComplexArray(logIO(), convFunc, convFuncCS_p, 
    1040             :                                        rotatedConvFunc,0.0);
    1041             : 
    1042             : 
    1043           0 :     ConjCFMap_p     = ConjCFMap.getStorage(deleteThem(CONJCFMAP));
    1044           0 :     CFMap_p         = CFMap.getStorage(deleteThem(CFMAP));
    1045             :     
    1046           0 :     uvw_p           = uvw.getStorage(deleteThem(UVW));
    1047           0 :     dphase_p        = dphase.getStorage(deleteThem(DPHASE));
    1048           0 :     flags_p         = flags.getStorage(deleteThem(FLAGS));
    1049           0 :     rowFlags_p      = rowFlags.getStorage(deleteThem(ROWFLAGS));
    1050           0 :     uvScale_p       = uvScale.getStorage(deleteThem(UVSCALE));
    1051           0 :     actualOffset_p  = actualOffset.getStorage(deleteThem(ACTUALOFFSET));
    1052           0 :     dataPtr_p       = dataPtr.getStorage(deleteThem(DATAPTR));
    1053           0 :     vb_freq_p       = (Double *)(vb.frequency().getStorage(deleteThem(VBFREQ)));
    1054           0 :     convSupport_p   = convSupport.getStorage(deleteThem(CONVSUPPORT));
    1055           0 :     convWtSupport_p = convWtSupport.getStorage(deleteThem(CONVWTSUPPORT));
    1056             :     //    f_convFunc_p      = convFunc.getStorage(deleteThem(CONVFUNC));
    1057           0 :     f_convFunc_p      = rotatedConvFunc.getStorage(deleteThem(CONVFUNC));
    1058           0 :     f_convWts_p     = convWeights.getStorage(deleteThem(CONVWTS));
    1059           0 :     chanMap_p       = chanMap.getStorage(deleteThem(CHANMAP));
    1060           0 :     polMap_p        = polMap.getStorage(deleteThem(POLMAP));
    1061           0 :     vb_ant1_p       = (Int *)(vb.antenna1().getStorage(deleteThem(VBANT1)));
    1062           0 :     vb_ant2_p       = (Int *)(vb.antenna2().getStorage(deleteThem(VBANT2)));
    1063           0 :     l_off_p         = l_off.getStorage(deleteThem(RAOFF));
    1064           0 :     m_off_p         = m_off.getStorage(deleteThem(DECOFF));
    1065           0 :     weight_p        = (Float *)(weight.getStorage(deleteThem(WEIGHT)));
    1066           0 :     sumwt_p         = sumWeight.getStorage(deleteThem(SUMWEIGHT));
    1067             :     Bool tmp;
    1068           0 :     isumwt_p        = iSumWt.getStorage(tmp);
    1069             : 
    1070             :     //    Array<Complex> avgPB_p(griddedWeights.get());
    1071           0 :     Array<Complex> avgPB_p;
    1072           0 :     if (!avgPBReady)
    1073             :       {
    1074           0 :         avgPB_p.resize(griddedWeights.shape());
    1075           0 :         avgPB_p=Complex(0,0);
    1076           0 :         avgPBPtr        = avgPB_p.getStorage(deleteThem(AVGPBPTR));
    1077             :       }
    1078             :     else
    1079           0 :       avgPBPtr=NULL;
    1080             :     
    1081           0 :     Int npa=convSupport.shape()(2),actualConvSize, actualConvWtSize;
    1082           0 :     Int paIndex_Fortran = paIndex; 
    1083           0 :     Int doAvgPB=((avgPBReady==false) && 
    1084           0 :                  ((fabs(lastPAUsedForWtImg-actualPA)*57.2956 >= DELTAPA) || 
    1085           0 :                   (lastPAUsedForWtImg == MAGICPAVALUE)));
    1086           0 :     doAvgPB=(avgPBReady==false);
    1087           0 :     actualConvSize = convFunc.shape()(0);
    1088           0 :     actualConvWtSize = convWeights.shape()(0);
    1089             : 
    1090           0 :     if (fabs(lastPAUsedForWtImg-actualPA)*57.2956 >= DELTAPA) lastPAUsedForWtImg = actualPA;
    1091             : 
    1092           0 :     IPosition shp=convSupport.shape();
    1093           0 :     Int alwaysDoPointing=1;
    1094           0 :     alwaysDoPointing = doPointing;
    1095           0 :     gpbmos(uvw_p,
    1096             :            dphase_p,
    1097             :            visdata_p,
    1098           0 :            &s.asVector()(0),
    1099           0 :            &s.asVector()(1),
    1100             :            &doPSF,
    1101             :            flags_p,
    1102             :            rowFlags_p,
    1103             :            weight_p,
    1104           0 :            &s.asVector()(2),
    1105             :            &rownr,
    1106             :            uvScale_p,
    1107             :            actualOffset_p,
    1108             :            dataPtr_p,
    1109             :            &aNx,
    1110             :            &aNy,
    1111             :            &npol,
    1112             :            &nchan,
    1113             :            vb_freq_p,
    1114             :            &C::c,
    1115             :            convSupport_p,
    1116             :            &actualConvSize,
    1117             :            &actualConvWtSize,
    1118             :            &convSampling,
    1119             :            &wConvSize,
    1120             :            f_convFunc_p,
    1121             :            chanMap_p,
    1122             :            polMap_p,
    1123             :            &polInUse,
    1124             :            //      sumwt_p,
    1125             :            isumwt_p,
    1126             :            vb_ant1_p,
    1127             :            vb_ant2_p,
    1128             :            &Nant_p,
    1129             :            &scanNo,
    1130             :            &sigma,
    1131             :            l_off_p, m_off_p,
    1132             :            &area,
    1133             :            &doGrad,
    1134             :            &alwaysDoPointing,
    1135             :            &npa,
    1136             :            &paIndex_Fortran,
    1137             :            CFMap_p,
    1138             :            ConjCFMap_p,
    1139             :            &currentCFPA,&actualPA,
    1140             :            &doAvgPB,
    1141             :            avgPBPtr,&cfRefFreq_p,
    1142             :            f_convWts_p,convWtSupport_p
    1143             :            );
    1144             : 
    1145           0 :     ConjCFMap.freeStorage((const Int *&)ConjCFMap_p,deleteThem(CONJCFMAP));
    1146           0 :     CFMap.freeStorage((const Int *&)CFMap_p,deleteThem(CFMAP));
    1147             :     
    1148           0 :     l_off.freeStorage((const Float*&)l_off_p,deleteThem(RAOFF));
    1149           0 :     m_off.freeStorage((const Float*&)m_off_p,deleteThem(DECOFF));
    1150           0 :     uvw.freeStorage((const Double*&)uvw_p,deleteThem(UVW));
    1151           0 :     dphase.freeStorage((const Double*&)dphase_p,deleteThem(DPHASE));
    1152           0 :     flags.freeStorage((const Int*&) flags_p,deleteThem(FLAGS));
    1153           0 :     rowFlags.freeStorage((const Int *&)rowFlags_p,deleteThem(ROWFLAGS));
    1154           0 :     actualOffset.freeStorage((const Double*&)actualOffset_p,deleteThem(ACTUALOFFSET));
    1155           0 :     dataPtr.freeStorage((const Complex *&)dataPtr_p,deleteThem(DATAPTR));
    1156           0 :     uvScale.freeStorage((const Double*&) uvScale_p,deleteThem(UVSCALE));
    1157           0 :     vb.frequency().freeStorage((const Double*&)vb_freq_p,deleteThem(VBFREQ));
    1158           0 :     convSupport.freeStorage((const Int*&)convSupport_p,deleteThem(CONVSUPPORT));
    1159           0 :     convFunc.freeStorage((const Complex *&)f_convFunc_p,deleteThem(CONVFUNC));
    1160           0 :     convWeights.freeStorage((const Complex *&)f_convFunc_p,deleteThem(CONVWTS));
    1161           0 :     chanMap.freeStorage((const Int*&)chanMap_p,deleteThem(CHANMAP));
    1162           0 :     polMap.freeStorage((const Int*&) polMap_p,deleteThem(POLMAP));
    1163           0 :     vb.antenna1().freeStorage((const Int*&) vb_ant1_p,deleteThem(VBANT1));
    1164           0 :     vb.antenna2().freeStorage((const Int*&) vb_ant2_p,deleteThem(VBANT2));
    1165           0 :     weight.freeStorage((const Float*&)weight_p,deleteThem(WEIGHT));
    1166           0 :     sumWeight.putStorage(sumwt_p,deleteThem(SUMWEIGHT));
    1167           0 :     iSumWt.putStorage(isumwt_p,tmp);
    1168           0 :     sumWeight += iSumWt;
    1169             : 
    1170           0 :     if (!avgPBReady)
    1171             :       {
    1172           0 :         nApertures+=Complex(1.0,0.0);
    1173             :         // Get the griddedWeigths as a referenced array
    1174           0 :         Array<Complex> gwts; Bool removeDegenerateAxis=false;
    1175           0 :         griddedWeights.get(gwts, removeDegenerateAxis);
    1176             :         //      griddedWeights.put(griddedWeights.get()+avgPB_p);
    1177           0 :         gwts = gwts + avgPB_p;
    1178             :         // if (!reference)
    1179             :         //   griddedWeights.put(gwts);
    1180           0 :       }
    1181           0 :   }
    1182             :   //
    1183             :   //---------------------------------------------------------------
    1184             :   //
    1185             :   // Initialize the FFT to the Sky. Here we have to setup and
    1186             :   // initialize the grid.
    1187             :   //
    1188           0 :   void PBMosaicFT::initializeToSky(ImageInterface<Complex>& iimage,
    1189             :                                    Matrix<Float>& weight,
    1190             :                                    const VisBuffer& vb)
    1191             :   {
    1192           0 :     image=&iimage;
    1193             :     
    1194           0 :     init();
    1195           0 :     initMaps(vb);
    1196           0 :     nx    = image->shape()(0);
    1197           0 :     ny    = image->shape()(1);
    1198           0 :     npol  = image->shape()(2);
    1199           0 :     nchan = image->shape()(3);
    1200             :     
    1201           0 :     if(image->shape().product()>cachesize) isTiled=true;
    1202           0 :     else                                   isTiled=false;
    1203             :     
    1204             :     
    1205           0 :     sumWeight=0.0;
    1206           0 :     weight.resize(sumWeight.shape());
    1207           0 :     weight=0.0;
    1208             : 
    1209           0 :     if(isTiled) 
    1210             :       {
    1211           0 :         imageCache->flush();
    1212           0 :         image->set(Complex(0.0));
    1213             :         //lattice=image;
    1214           0 :         lattice=CountedPtr<Lattice<Complex> > (image, false);
    1215             :       }
    1216             :     else 
    1217             :       {
    1218           0 :         IPosition gridShape(4, nx, ny, npol, nchan);
    1219           0 :         griddedData.resize(gridShape);
    1220           0 :         griddedData=Complex(0.0);
    1221             : //      if(arrayLattice) delete arrayLattice; arrayLattice=0;
    1222           0 :         arrayLattice = new ArrayLattice<Complex>(griddedData);
    1223           0 :         lattice=arrayLattice;
    1224           0 :       }
    1225             :     //AlwaysAssert(lattice, AipsError);
    1226           0 :     PAIndex = -1;
    1227           0 :     if (resetPBs)
    1228             :       {
    1229           0 :         griddedWeights.resize(iimage.shape()); 
    1230           0 :         griddedWeights.setCoordinateInfo(iimage.coordinates());
    1231           0 :         griddedWeights.set(0.0);
    1232           0 :         noOfPASteps = 1;
    1233           0 :         pbPeaks.resize(griddedWeights.shape()(2));
    1234           0 :         pbPeaks.set(0.0);
    1235           0 :         resetPBs=false;
    1236             :       }
    1237           0 :   }
    1238             :   //
    1239             :   //---------------------------------------------------------------
    1240             :   //
    1241           0 :   void PBMosaicFT::finalizeToSky()
    1242             :   {
    1243           0 :     if(isTiled) 
    1244             :       {
    1245           0 :         logIO() << LogOrigin("PBMosaicFT", "finalizeToSky")  << LogIO::NORMAL;
    1246             :         
    1247           0 :         AlwaysAssert(image, AipsError);
    1248           0 :         AlwaysAssert(imageCache, AipsError);
    1249           0 :         imageCache->flush();
    1250           0 :         ostringstream o;
    1251           0 :         imageCache->showCacheStatistics(o);
    1252           0 :         logIO() << o.str() << LogIO::POST;
    1253           0 :       }
    1254             : 
    1255           0 :     if(pointingToImage) delete pointingToImage; pointingToImage=0;
    1256           0 :     PAIndex = -1;
    1257             : 
    1258           0 :     paChangeDetector.reset();
    1259           0 :     cfCache.finalize();
    1260           0 :     convFuncCacheReady=true;
    1261           0 :   }
    1262             : 
    1263             : } //# NAMESPACE CASA - END

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