LCOV - code coverage report
Current view: top level - msvis/MSVis - Reweighter.cc (source / functions) Hit Total Coverage
Test: casacpp_coverage.info Lines: 0 296 0.0 %
Date: 2024-10-10 19:51:30 Functions: 0 16 0.0 %

          Line data    Source code
       1             : //# Reweighter.cc 
       2             : //# Copyright (C) 1996-2007
       3             : //# Associated Universities, Inc. Washington DC, USA.
       4             : //#
       5             : //# This library is free software; you can redistribute it and/or modify
       6             : //# it under the terms of the GNU General Public License as published by
       7             : //# the Free Software Foundation; either version 2 of the License, or
       8             : //# (at your option) any later version.
       9             : //#
      10             : //# This library is distributed in the hope that it will be useful,
      11             : //# but WITHOUT ANY WARRANTY; without even the implied warranty of
      12             : //# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
      13             : //# GNU General Public License for more details.
      14             : //# 
      15             : //# You should have received a copy of the GNU General Public License
      16             : //# along with this library; if not, write to the Free Software
      17             : //# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
      18             : //#
      19             : //# Correspondence concerning AIPS++ should be addressed as follows:
      20             : //#        Internet email: casa-feedback@nrao.edu.
      21             : //#        Postal address: AIPS++ Project Office
      22             : //#                        National Radio Astronomy Observatory
      23             : //#                        520 Edgemont Road
      24             : //#                        Charlottesville, VA 22903-2475 USA
      25             : //#
      26             : //# $Id: $
      27             : 
      28             : // To make Timer reports in the inner loop of the simple copy,
      29             : // uncomment the following line:
      30             : //#define COPYTIMER
      31             : 
      32             : #include <msvis/MSVis/Reweighter.h>
      33             : #include <casacore/ms/MSSel/MSSelection.h>
      34             : //#include <ms/MSSel/MSTimeGram.h>
      35             : //#include <tables/TaQL/ExprNode.h>
      36             : #include <casacore/tables/Tables/RefRows.h>
      37             : #include <casacore/ms/MeasurementSets/MSColumns.h>
      38             : #include <casacore/casa/Arrays/Matrix.h>
      39             : #include <casacore/casa/Arrays/Cube.h>
      40             : #include <casacore/casa/Arrays/ArrayMath.h>
      41             : #include <casacore/casa/Arrays/ArrayLogical.h>
      42             : #include <casacore/casa/Arrays/ArrayUtil.h>
      43             : #include <casacore/casa/Arrays/IPosition.h>
      44             : #include <casacore/casa/Arrays/Slice.h>
      45             : #include <casacore/casa/Logging/LogIO.h>
      46             : #include <casacore/casa/OS/File.h>
      47             : #include <casacore/casa/OS/HostInfo.h>
      48             : #include <casacore/casa/OS/Memory.h>              // Can be commented out along with
      49             : //                                         // Memory:: calls.
      50             : 
      51             : //#ifdef COPYTIMER
      52             : #include <casacore/casa/OS/Timer.h>
      53             : //#endif
      54             : 
      55             : #include <casacore/casa/Containers/Record.h>
      56             : #include <casacore/casa/BasicSL/String.h>
      57             : #include <casacore/casa/Utilities/Assert.h>
      58             : #include <casacore/casa/Utilities/GenSort.h>
      59             : #include <casacore/casa/System/AppInfo.h>
      60             : #include <casacore/casa/System/ProgressMeter.h>
      61             : #include <casacore/casa/Quanta/QuantumHolder.h>
      62             : #include <msvis/MSVis/GroupProcessor.h>
      63             : //#include <msvis/MSVis/VisSet.h>
      64             : #include <msvis/MSVis/StatWT.h>
      65             : #include <msvis/MSVis/VisBuffer.h>
      66             : #include <msvis/MSVis/VisBufferComponents.h>
      67             : #include <msvis/MSVis/VisChunkAverager.h>
      68             : #include <msvis/MSVis/VisIterator.h>
      69             : //#include <msvis/MSVis/VisibilityIterator.h>
      70             : #include <casacore/tables/DataMan/IncrementalStMan.h>
      71             : #include <casacore/tables/Tables/ScalarColumn.h>
      72             : #include <casacore/tables/Tables/ScaColDesc.h>
      73             : #include <casacore/tables/DataMan/StandardStMan.h>
      74             : #include <casacore/tables/Tables/Table.h>
      75             : #include <casacore/tables/Tables/PlainTable.h>
      76             : #include <casacore/tables/Tables/TableDesc.h>
      77             : #include <casacore/tables/Tables/TableInfo.h>
      78             : #include <casacore/tables/Tables/TableLock.h>
      79             : #include <casacore/tables/Tables/TableRecord.h>
      80             : #include <casacore/tables/Tables/TableCopy.h>
      81             : #include <casacore/tables/Tables/TableRow.h>
      82             : #include <casacore/tables/DataMan/TiledColumnStMan.h>
      83             : #include <casacore/tables/DataMan/TiledShapeStMan.h>
      84             : #include <casacore/tables/DataMan/TiledDataStMan.h>
      85             : #include <casacore/tables/DataMan/TiledStManAccessor.h>
      86             : #include <casacore/ms/MeasurementSets/MSTileLayout.h>
      87             : #include <sstream>
      88             : #include <iomanip>
      89             : #include <functional>
      90             : #include <map>
      91             : #include <set>
      92             : #include <casacore/scimath/Mathematics/Smooth.h>
      93             : #include <casacore/casa/Quanta/MVTime.h>
      94             : 
      95             : using namespace casacore;
      96             : namespace casa {
      97             : 
      98             : typedef ROVisibilityIterator ROVisIter;
      99             : typedef VisibilityIterator VisIter;
     100             : 
     101           0 : Reweighter::Reweighter(const String& theMS, const Bool dorms, const uInt minsamp) :
     102           0 :   ms_p(MeasurementSet(theMS, Table::Update)),
     103           0 :   mssel_p(ms_p),
     104           0 :   dorms_p(dorms),
     105           0 :   minsamp_p(minsamp),
     106           0 :   msc_p(NULL),
     107           0 :   antennaSel_p(false),
     108           0 :   timeBin_p(-1.0),
     109           0 :   scanString_p(""),
     110           0 :   intentString_p(""),
     111           0 :   obsString_p(""),
     112           0 :   timeRange_p(""),
     113           0 :   arrayExpr_p(""),
     114           0 :   combine_p(""),
     115           0 :   fitspw_p("*"),
     116           0 :   outspw_p("*")
     117             : {
     118           0 : }
     119             :   
     120           0 : Reweighter::~Reweighter()
     121             : {
     122           0 :   delete msc_p;
     123           0 :   msc_p = NULL;
     124           0 : }
     125             : 
     126           0 : Bool Reweighter::selectSpw(std::set<Int>& spwset, Vector<Int>& chanStartv,
     127             :                            Vector<Int>& chanEndv, Vector<Int>& chanStepv,
     128             :                            const String& spwstr)
     129             : {
     130           0 :   LogIO os(LogOrigin("Reweighter", "selectSpw()"));
     131             : 
     132           0 :   MSSelection mssel;
     133           0 :   String myspwstr(spwstr == "" ? "*" : spwstr);
     134             : 
     135           0 :   mssel.setSpwExpr(myspwstr);
     136             : 
     137             :   // Each row should have spw, start, stop, step
     138             :   // A single width is a default, but multiple widths should be used
     139             :   // literally.
     140           0 :   Matrix<Int> chansel = mssel.getChanList(&ms_p, 1);
     141             : 
     142           0 :   if(chansel.nrow() > 0) {         // Use myspwstr if it selected anything...
     143           0 :     Vector<Int> spwv(chansel.column(0));
     144             : 
     145           0 :     uInt nspwsel = spwv.size();
     146           0 :     chanStartv.resize(nspwsel);
     147           0 :     chanEndv.resize(nspwsel);
     148           0 :     chanStepv.resize(nspwsel);
     149             : 
     150           0 :     chanStartv = chansel.column(1);
     151           0 :     chanEndv   = chansel.column(2);
     152           0 :     chanStepv  = chansel.column(3);
     153             : 
     154           0 :     uInt nspw = chanEndv.nelements();
     155             : 
     156           0 :     for(uInt k = 0; k < nspw; ++k){
     157           0 :       spwset.insert(spwv[k]);
     158             : 
     159           0 :       if(chanStepv[k] == 0)     // CAS-2224, triggered by spw='0:2'
     160           0 :         chanStepv[k] = 1;       // (as opposed to '0:2~2').
     161             :         
     162             :       //nchan[k] = 1 + (chanEndv[k] - chanStartv[k]) / chanStepv[k];
     163             :       //if(nchan[k] < 1)
     164             :       //  nchan[k] = 1;
     165             :     }
     166           0 :   }
     167             :   else{                            // select everything and rely on widths.
     168           0 :     MSSpWindowColumns mySpwTab(ms_p.spectralWindow());
     169           0 :     uInt nspw = mySpwTab.nrow();
     170           0 :     Vector<Int> nchan(nspw);
     171             : 
     172           0 :     nchan = mySpwTab.numChan().getColumn();
     173             :             
     174           0 :     chanStartv.resize(nspw);
     175           0 :     chanStepv.resize(nspw);
     176           0 :     for(uInt k = 0; k < nspw; ++k){
     177           0 :       spwset.insert(k);      
     178           0 :       chanStartv[k] = 0;
     179           0 :       chanEndv[k]   = nchan[k] - 1;
     180           0 :       chanStepv[k]  = 1;
     181             :     }
     182           0 :   }
     183             :     
     184           0 :   mssel.getChanSlices(chanSlices_p, &ms_p, 1);
     185           0 :   return true;
     186           0 : }
     187             : 
     188           0 : Bool Reweighter::selectCorrelations(const String& corrstr)
     189             : {
     190           0 :   LogIO os(LogOrigin("Reweighter", "selectCorrelations()"));
     191           0 :   MSSelection mssel;
     192           0 :   const Bool areSelecting = corrstr != "" && corrstr != "*";
     193             : 
     194           0 :   if(areSelecting)
     195           0 :     mssel.setPolnExpr(corrstr);
     196           0 :   mssel.getCorrSlices(corrSlices_p, &ms_p);
     197             :   //return getCorrTypes(polIDs_p, corrTypes_p, mssel, ms_p, areSelecting);
     198           0 :   return areSelecting;
     199           0 : }
     200             : 
     201           0 : Bool Reweighter::getCorrTypes(Vector<Int>& polIDs,
     202             :                               Vector<Vector<Int> >& corrTypes,
     203             :                               const MSColumns& msc)
     204             : {
     205           0 :   Bool cando = true;
     206             : 
     207           0 :   polIDs = msc.dataDescription().polarizationId().getColumn();
     208           0 :   corrTypes = msc.polarization().corrType().getColumn();
     209           0 :   return cando;
     210             : }
     211             : 
     212           0 : Bool Reweighter::setmsselect(const String& fitspw, const String& outspw,
     213             :                              const String& field,  const String& baseline,
     214             :                              const String& scan,   const String& subarray,
     215             :                              const String& correlation, const String& intent,
     216             :                              const String& obs)
     217             : {
     218           0 :   LogIO os(LogOrigin("Reweighter", "setmsselect()"));
     219             :   Bool  ok;
     220             :     
     221             :   // All of the requested selection functions will be tried, even if an
     222             :   // earlier one has indicated its failure.  This allows all of the selection
     223             :   // strings to be tested, yielding more complete feedback for the user
     224             :   // (fewer retries).  This is a matter of taste, though.  If the selections
     225             :   // turn out to be slow, this function should return on the first false.
     226             : 
     227             :   // Do the output spw selection first because the channel vectors are dummies;
     228             :   // for output we only care about the spws.
     229           0 :   if(!selectSpw(outspwset_p, fitStart_p, fitEnd_p, fitStep_p, outspw)){
     230             :     os << LogIO::SEVERE
     231             :        << "No spectral windows selected for reweighting."
     232           0 :        << LogIO::POST;
     233           0 :     ok = false;
     234             :   }
     235           0 :   chanSlices_p.resize(0);
     236             :   // Check for : in outspw, and warn about it, at the Python level.
     237             : 
     238           0 :   if(!selectSpw(fitspwset_p, fitStart_p, fitEnd_p, fitStep_p, fitspw)){
     239             :     os << LogIO::SEVERE
     240             :        << "No channels selected for calculating the scatter."
     241           0 :        << LogIO::POST;
     242           0 :     ok = false;
     243             :   }
     244           0 :   Record selrec = ms_p.msseltoindex(outspw, field);
     245           0 :   ok = selectSource(selrec.asArrayInt("field"));
     246             : 
     247           0 :   if(baseline != ""){
     248           0 :     Vector<Int> antid(0);
     249           0 :     Vector<String> antstr(1,baseline);
     250           0 :     selectAntenna(antid, antstr);
     251           0 :   }
     252           0 :   scanString_p    = scan;
     253           0 :   intentString_p  = intent;
     254           0 :   obsString_p     = obs;
     255             : 
     256           0 :   if(subarray != "")
     257           0 :     selectArray(subarray);
     258             : 
     259           0 :   if(!selectCorrelations(correlation)){
     260             :     //os << LogIO::SEVERE << "No correlations selected." << LogIO::POST;
     261             :     //For now, false here means no selection== use all available correlations
     262             :     //so no nead to raise an error.
     263             :     //ok = false;
     264             :   }
     265             : 
     266           0 :   return ok;
     267           0 : }
     268             : 
     269           0 : Bool Reweighter::selectSource(const Vector<Int>& fieldid)
     270             : {
     271           0 :   LogIO os(LogOrigin("Reweighter", "selectSource()"));
     272           0 :   Bool cando = true;
     273             : 
     274           0 :   if(fieldid.nelements() < 1){
     275           0 :     fieldId_p = Vector<Int>(1, -1);
     276             :   }
     277           0 :   else if(fieldid.nelements() > ms_p.field().nrow()){
     278             :     os << LogIO::SEVERE
     279             :        << "More fields were requested than are in the input MS.\n"
     280           0 :        << LogIO::POST;
     281           0 :     cando = false;
     282             :   }
     283           0 :   else if(max(fieldid) >= static_cast<Int>(ms_p.field().nrow())){
     284             :     // Arriving here is very unlikely since if fieldid came from MSSelection
     285             :     // bad fields were presumably already quietly dropped.
     286             :     os << LogIO::SEVERE
     287             :        << "At least 1 field was requested that is not in the input MS.\n"
     288           0 :        << LogIO::POST;      
     289           0 :     cando = false;
     290             :   }
     291             :   else{
     292           0 :     fieldId_p = fieldid;
     293             :   }
     294             : 
     295           0 :   if(fieldId_p.nelements() == 1 && fieldId_p[0] < 0){
     296           0 :     fieldId_p.resize(ms_p.field().nrow());
     297           0 :     indgen(fieldId_p);
     298             :   }
     299           0 :   return cando;
     300           0 : }
     301             : 
     302           0 : MS::PredefinedColumns Reweighter::dataColStrToEnum(const String& col)
     303             : {
     304           0 :   LogIO os(LogOrigin("Reweighter", "dataColStrToEnum()"));
     305           0 :   String tmpName(col);
     306             : 
     307           0 :   tmpName.upcase();
     308             : 
     309           0 :   MS::PredefinedColumns result = MS::DATA;
     310             :             
     311           0 :   if(tmpName == "OBSERVED" || tmpName == "DATA" || tmpName == MS::columnName(MS::DATA))
     312           0 :     result = MS::DATA;
     313           0 :   else if(tmpName == "FLOAT" || tmpName == "FLOAT_DATA" || tmpName == MS::columnName(MS::FLOAT_DATA))
     314           0 :     result = MS::FLOAT_DATA;
     315           0 :   else if(tmpName == "LAG" || tmpName == "LAG_DATA" || tmpName == MS::columnName(MS::LAG_DATA))
     316           0 :     result = MS::LAG_DATA;
     317           0 :   else if(tmpName == "MODEL" || tmpName == "MODEL_DATA" || tmpName == MS::columnName(MS::MODEL_DATA))
     318           0 :     result = MS::MODEL_DATA;
     319           0 :   else if(tmpName == "CORRECTED" || tmpName == "CORRECTED_DATA" || 
     320           0 :           tmpName == MS::columnName(MS::CORRECTED_DATA))
     321           0 :     result = MS::CORRECTED_DATA;
     322             :   else
     323             :     os << LogIO::WARN
     324             :        << "Unrecognized data column " << tmpName << "...using DATA."
     325           0 :        << LogIO::POST;
     326           0 :   return result;
     327           0 : }
     328             : 
     329           0 : void Reweighter::selectTime(Double timeBin, String timerng)
     330             : {  
     331           0 :   timeBin_p   = timeBin;
     332           0 :   timeRange_p = timerng;
     333           0 : }  
     334             :   
     335           0 : Bool Reweighter::reweight(String& colname, const String& combine)
     336             : {
     337             :     //Bool retval = true;
     338           0 :   LogIO os(LogOrigin("Reweighter", "reweight()"));
     339             : 
     340             :   try{
     341           0 :     if(!makeSelection()){
     342             :       os << LogIO::SEVERE 
     343             :          << "Failed on selection: the combination of spw, field, antenna, correlation, "
     344             :          << "and timerange may be invalid." 
     345           0 :          << LogIO::POST;
     346           0 :       ms_p=MeasurementSet();
     347           0 :       return false;
     348             :     }
     349           0 :     msc_p = new MSColumns(mssel_p);
     350             :     // Note again the parseColumnNames() a few lines back that stops setupMS()
     351             :     // from being called if the MS doesn't have the requested columns.
     352             :       
     353           0 :     combine_p = combine;
     354             : 
     355             :     //Detaching the selected part
     356           0 :     ms_p = MeasurementSet();
     357             : 
     358           0 :     Block<Int> sort;
     359           0 :     if(!setSortOrder(sort, "obs,scan,state", false)){
     360             :       os << LogIO::WARN
     361             :          << "Something in the combine string is not supported for reweighting."
     362           0 :          << LogIO::POST;
     363             :     }
     364             : 
     365             :     // Aaargh...everywhere else VisIter is used a timeInterval of 0 is treated as
     366             :     // DBL_MAX, meaning that TIME can be in sort but effectively be ignored for
     367             :     // major chunking.  Why couldn't they just have said DBL_MAX in the first
     368             :     // place?
     369           0 :     ROVisibilityIterator viIn(mssel_p, sort, false, DBL_MIN);
     370             : 
     371             :     // Make sure it is initialized before any copies are made.
     372           0 :     viIn.originChunks();
     373             : 
     374             : 
     375             :     // NB: The following correlation selection---which doesn't work
     376             :     //  in multi-corrshape datasets---has been rendered meaningless
     377             :     //  within StatWT.  In general, it is probably not desirable to
     378             :     //  make the weight disposition correlation-dependent, in any
     379             :     //  case.  As such, correlation selection has been disabled
     380             :     //  in the user interface, too.   (gmoellen, 2015Aug12)
     381             : 
     382             :     // Make a list of indices of selected correlations
     383           0 :     vector<uInt> selcorrs;
     384           0 :     uInt nSelCorrs=corrSlices_p[0].nelements();
     385           0 :     if (nSelCorrs>0) {
     386           0 :      for (uInt i = 0; i < nSelCorrs; i++) {
     387           0 :          Slice slice=corrSlices_p[0][i];
     388           0 :          selcorrs.push_back(slice.start());
     389             :      }
     390             :     }
     391             :     else { // no selection == all 
     392           0 :       for (Int i = 0; i < viIn.nCorr(); i++) selcorrs.push_back(static_cast<uInt>(i));
     393             :     } 
     394             : 
     395           0 :     StatWT statwt(viIn, dataColStrToEnum(colname), fitspw_p, outspw_p, dorms_p,
     396           0 :          minsamp_p,selcorrs);
     397           0 :     GroupProcessor gp(viIn, &statwt);
     398             : 
     399           0 :     gp.go();
     400             : 
     401             :     // There should be now be statistically determined sigmas and weights for
     402             :     // each selected row.  If smoothing is wanted, i.e. convolving by a
     403             :     // gaussian in time (taking the ends into account), do it now with a pass
     404             :     // over just WEIGHT, SIGMA, and the flags.
     405             :     //
     406             :     // In theory two passes is a little less accurate than gathering all the
     407             :     // data for a time window and then calculating the variance, but I show
     408             :     // here that the loss of accuracy is very small at worst, and in practice
     409             :     // two passes is much better.
     410             :     //
     411             :     // The variance of \sigma^2 is \sigma^4 (\frac{2}{n - 1} + \frac{k}{n}),
     412             :     // where the kurtosis k is 0 for a normal distribution.  It will be dropped
     413             :     // from here on since it does not affect the argument.
     414             :     //
     415             :     // So for a sample of mn visibilities (gather up all the data for a time
     416             :     // window before calculating the variances), the variance of \sigma^2 is
     417             :     // 2 \sigma^4 / (mn - 1).
     418             :     //
     419             :     // If the variance of the time window is instead calculated from the
     420             :     // variances of m groups of size n, the variance of the variance is
     421             :     // 2 \sigma^4 / [m (n - 1)]
     422             :     //
     423             :     // Thus there is a difference, but a small one if n >> 1 (i.e. a reasonable
     424             :     // number of channels).  More importantly, the m groups of n method
     425             :     //  * is robust against the n groups having different means.
     426             :     //    The only likely way that all the groups would have exactly the same
     427             :     //    mean is if the mean is 0, in which case rms should be used instead of
     428             :     //    stddev and the relevant sample size is simply mn no matter how
     429             :     //    they're grouped.  (I think; untested)
     430             :     //  * m groups of n is a lot more flexible for programming and needs less
     431             :     //    memory.  It does mean some extra I/O for another pass, but it's only
     432             :     //    over WEIGHT, SIGMA, FLAG_ROW, and unfortunately FLAG.
     433             :     
     434           0 :     return true;
     435           0 :   }
     436           0 :   catch(AipsError x){
     437           0 :     ms_p = MeasurementSet();
     438           0 :     throw(x);
     439           0 :   }
     440           0 :   catch(...){
     441           0 :     ms_p = MeasurementSet();
     442           0 :     throw(AipsError("Unknown exception caught"));
     443           0 :   }
     444           0 : }
     445             : 
     446           0 : void Reweighter::makeUnionSpw()
     447             : {
     448           0 :   std::set<Int> unionset = fitspwset_p;
     449           0 :   std::set<Int>::iterator it;
     450           0 :   uInt i = 0;
     451             : 
     452           0 :   for(it = outspwset_p.begin(); it != outspwset_p.end(); ++it)
     453           0 :     unionset.insert(*it);
     454           0 :   unionspw_p.resize(unionset.size());
     455             : 
     456           0 :   for(it = unionset.begin(); it != unionset.end(); ++it)
     457           0 :     unionspw_p[i++] = *it;
     458           0 : }
     459             : 
     460           0 : Bool Reweighter::makeSelection()
     461             : {    
     462           0 :   LogIO os(LogOrigin("Reweighter", "makeSelection()"));
     463             :     
     464             :   //VisSet/MSIter will check if the SORTED exists
     465             :   //and resort if necessary
     466             :   {
     467             :     // Matrix<Int> noselection;
     468             :     // VisSet vs(ms_p, noselection);
     469           0 :     Block<Int> sort;
     470           0 :     ROVisibilityIterator(ms_p, sort);
     471           0 :   }
     472             :    
     473             :   const MeasurementSet *elms;
     474           0 :   elms = &ms_p;
     475           0 :   MeasurementSet sorted;
     476           0 :   if(ms_p.keywordSet().isDefined("SORTED_TABLE")){
     477           0 :     sorted = ms_p.keywordSet().asTable("SORTED_TABLE");
     478             :     //If ms is not writable and sort is a subselection...use original ms
     479           0 :     if( ms_p.nrow() == sorted.nrow())
     480           0 :       elms = &sorted;
     481             :   }
     482             :  
     483           0 :   MSSelection thisSelection;
     484           0 :   if(fieldId_p.nelements() > 0)
     485           0 :     thisSelection.setFieldExpr(MSSelection::indexExprStr(fieldId_p));
     486           0 :   if(unionspw_p.nelements() > 0)
     487           0 :     thisSelection.setSpwExpr(MSSelection::indexExprStr(unionspw_p));
     488           0 :   if(antennaSel_p){
     489           0 :     if(antennaId_p.nelements() > 0){
     490           0 :       thisSelection.setAntennaExpr(MSSelection::indexExprStr( antennaId_p ));
     491             :     }
     492           0 :     if(antennaSelStr_p[0] != "")
     493           0 :       thisSelection.setAntennaExpr(MSSelection::nameExprStr( antennaSelStr_p));
     494             :   }
     495           0 :   if(timeRange_p != "")
     496           0 :     thisSelection.setTimeExpr(timeRange_p);
     497             :     
     498           0 :   thisSelection.setScanExpr(scanString_p);
     499           0 :   thisSelection.setStateExpr(intentString_p);
     500           0 :   thisSelection.setObservationExpr(obsString_p);
     501           0 :   if(arrayExpr_p != "")
     502           0 :     thisSelection.setArrayExpr(arrayExpr_p);
     503           0 :   if(corrString_p != "")
     504           0 :     thisSelection.setPolnExpr(corrString_p);
     505             :     
     506           0 :   TableExprNode exprNode=thisSelection.toTableExprNode(elms);
     507           0 :   selTimeRanges_p = thisSelection.getTimeList();
     508             : 
     509             :   // Now remake the selected ms
     510           0 :   if(!(exprNode.isNull())){
     511           0 :     mssel_p = MeasurementSet((*elms)(exprNode));
     512             :   }
     513             :   else{
     514             :     // Null take all the ms ...setdata() blank means that
     515           0 :     mssel_p = MeasurementSet((*elms));
     516             :   }
     517             :   //mssel_p.rename(ms_p.tableName()+"/SELECTED_TABLE", Table::Scratch);
     518           0 :   if(mssel_p.nrow() == 0)
     519           0 :     return false;
     520             : 
     521             :   // Setup antNewIndex_p now that mssel_p is ready.
     522           0 :   if(antennaSel_p){
     523             :     // Watch out! getAntenna*List() and getBaselineList() return negative
     524             :     // numbers for negated antennas!
     525             :     //Vector<Int> selAnt1s(thisSelection.getAntenna1List());
     526             :     //Vector<Int> selAnt2s(thisSelection.getAntenna2List());
     527           0 :     ScalarColumn<Int> ant1c(mssel_p, MS::columnName(MS::ANTENNA1));
     528           0 :     ScalarColumn<Int> ant2c(mssel_p, MS::columnName(MS::ANTENNA2));
     529           0 :     Vector<Int> selAnts(ant1c.getColumn());
     530           0 :     uInt nAnts = selAnts.nelements();
     531             : 
     532           0 :     selAnts.resize(2 * nAnts, true);
     533           0 :     selAnts(Slice(nAnts, nAnts)) = ant2c.getColumn();
     534           0 :     nAnts = GenSort<Int>::sort(selAnts, Sort::Ascending, Sort::NoDuplicates);
     535           0 :     selAnts.resize(nAnts, true);
     536           0 :     Int maxAnt = max(selAnts);
     537             : 
     538           0 :     if(maxAnt < 0){
     539             :       os << LogIO::SEVERE
     540             :          << "The maximum selected antenna number, " << maxAnt
     541             :          << ", seems to be < 0."
     542           0 :          << LogIO::POST;
     543           0 :       return false;
     544             :     }
     545             : 
     546           0 :     Bool trivial = true;
     547           0 :     for(uInt k = 0; k < nAnts; ++k)
     548           0 :       trivial &= (selAnts[k] == static_cast<Int>(k));   // trivial = selAnts == indgen(nAnts)
     549             :                                        // It is possible to exclude baselines
     550           0 :     antennaSel_p = !trivial;           // without excluding any antennas.
     551           0 :   }                                    // This still gets tripped up by VLA:OUT.
     552             :    
     553           0 :   if(mssel_p.nrow() < ms_p.nrow()){
     554             :     os << LogIO::NORMAL
     555             :        << mssel_p.nrow() << " out of " << ms_p.nrow() << " rows are going to be" 
     556             :        << " considered due to the selection criteria." 
     557           0 :        << LogIO::POST;
     558             :   }
     559           0 :   return true;
     560           0 : }
     561             : 
     562           0 : Bool Reweighter::shouldWatch(Bool& conflict, const String& col,
     563             :                              const String& uncombinable,
     564             :                              const Bool verbose) const
     565             : {
     566           0 :   Bool wantWatch = !combine_p.contains(col);
     567             : 
     568           0 :   if(!wantWatch && uncombinable.contains(col)){
     569           0 :     conflict = true;
     570           0 :     wantWatch = false;
     571             : 
     572           0 :     if(verbose){
     573           0 :       LogIO os(LogOrigin("Reweighter", "shouldWatch()"));
     574             : 
     575             :       os << LogIO::WARN
     576             :          << "Combining by " << col
     577             :          << " was requested, but it is not allowed by this operation and will be ignored."
     578           0 :          << LogIO::POST;
     579           0 :     }
     580             :   }
     581           0 :   return wantWatch;
     582             : }
     583             : 
     584           0 : Bool Reweighter::setSortOrder(Block<Int>& sort, const String& uncombinable,
     585             :                               const Bool verbose) const
     586             : {
     587           0 :   Bool conflict = false;
     588           0 :   uInt n_cols_to_watch = 7;     // 3 + #(watchables), whether or not they are watched.
     589             : 
     590             :   // Already separated by the chunking.
     591             :   //const Bool watch_array(!combine_p.contains("arr")); // Pirate talk for "array".
     592             : 
     593           0 :   Bool watch_obs   = shouldWatch(conflict, "obs",   uncombinable, verbose);
     594           0 :   Bool watch_scan  = shouldWatch(conflict, "scan",  uncombinable, verbose);
     595           0 :   Bool watch_spw   = shouldWatch(conflict, "spw",   uncombinable, verbose);
     596           0 :   Bool watch_state = shouldWatch(conflict, "state", uncombinable, verbose);
     597             : 
     598             :   // if(watch_obs)
     599             :   //   ++n_cols_to_watch;
     600             :   // if(watch_scan)
     601             :   //   ++n_cols_to_watch;
     602             :   // if(watch_spw)
     603             :   //   ++n_cols_to_watch;
     604             :   // if(watch_state)
     605             :   //   ++n_cols_to_watch;
     606             : 
     607           0 :   uInt colnum = 1;
     608             : 
     609           0 :   sort.resize(n_cols_to_watch);
     610           0 :   sort[0] = MS::ARRAY_ID;
     611           0 :   if(watch_scan){
     612           0 :     sort[colnum] = MS::SCAN_NUMBER;
     613           0 :     ++colnum;
     614             :   }
     615           0 :   if(watch_state){
     616           0 :     sort[colnum] = MS::STATE_ID;
     617           0 :     ++colnum;
     618             :   }
     619           0 :   sort[colnum] = MS::FIELD_ID;
     620           0 :   ++colnum;
     621           0 :   if(watch_spw){
     622           0 :     sort[colnum] = MS::DATA_DESC_ID;
     623           0 :     ++colnum;
     624             :   }
     625           0 :   sort[colnum] = MS::TIME;
     626           0 :   ++colnum;  
     627           0 :   if(watch_obs){
     628           0 :     sort[colnum] = MS::OBSERVATION_ID;
     629           0 :     ++colnum;
     630             :   }
     631             : 
     632             :   // Now all the axes that should be combined should be added, so that they end
     633             :   // up in the same chunk.
     634           0 :   if(!watch_scan){
     635           0 :     sort[colnum] = MS::SCAN_NUMBER;
     636           0 :     ++colnum;
     637             :   }
     638           0 :   if(!watch_state){
     639           0 :     sort[colnum] = MS::STATE_ID;
     640           0 :     ++colnum;
     641             :   }
     642           0 :   if(!watch_spw){
     643           0 :     sort[colnum] = MS::DATA_DESC_ID;
     644           0 :     ++colnum;
     645             :   }
     646           0 :   if(!watch_obs){
     647           0 :     sort[colnum] = MS::OBSERVATION_ID;
     648             :     //++colnum;
     649             :   }
     650             : 
     651           0 :   return !conflict;
     652             : }
     653             : 
     654           0 : const ArrayColumn<Complex>& Reweighter::right_column(const MSColumns *msclala,
     655             :                                                        const MS::PredefinedColumns col)
     656             : {
     657           0 :   if(col == MS::DATA)
     658           0 :     return msclala->data();
     659           0 :   else if(col == MS::MODEL_DATA)
     660           0 :     return msclala->modelData();
     661             :   //  else if(col == MS::FLOAT_DATA) // Not complex.
     662             :   //  return msclala->floatData();
     663           0 :   else if(col == MS::LAG_DATA)
     664           0 :     return msclala->lagData();
     665             :   else                                // The honored-by-time-if-nothing-else
     666           0 :     return msclala->correctedData();  // default.
     667             : }
     668             : 
     669             : } //#End casa namespace

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