2023-11-04 09:13:36	INFO	::casa	Using configuration file ~/.casa/config.py
2023-11-04 09:13:36	INFO	::casa	
2023-11-04 09:13:36	INFO	::casa	Checking Measures tables in data repository sub-directory /wheeldirectory/casa-CAS-14200-7-py3.8.el8/lib/py/lib/python3.8/site-packages/casadata/__data__/geodetic
2023-11-04 09:13:36	INFO	::casa	  IERSeop2000 (version date, last date in table (UTC)): 2023/10/06/15:00, 2023/09/06/00:00:00
2023-11-04 09:13:36	INFO	::casa	  IERSeop97 (version date, last date in table (UTC)): 2023/10/06/15:00, 2023/09/06/00:00:00
2023-11-04 09:13:36	INFO	::casa	  IERSpredict (version date, last date in table (UTC)): 2023/10/29/15:00, 2024/01/27/00:00:00
2023-11-04 09:13:36	INFO	::casa	  TAI_UTC (version date, last date in table (UTC)): 2023/10/13/15:00, 2017/01/01/00:00:00
2023-11-04 09:13:37	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:37	INFO	flagdata::::casa	##### Begin Task: flagdata           #####
2023-11-04 09:13:37	INFO	flagdata::::casa	flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True )
2023-11-04 09:13:37	INFO	flagdata::::casa	Backup original flags before applying new flags
2023-11-04 09:13:37	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:37	INFO	FlagVersion::saveFlagVersion	Creating new backup flag file called flagdata_1
2023-11-04 09:13:37	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:37	INFO	flagdata::::casa	Manual mode is active
2023-11-04 09:13:37	INFO	FlagCalTableHandler::selectData 	Original CalTable has 196 rows, and selected CalTable has 7 rows
2023-11-04 09:13:37	INFO	flagdata::::casa	Initializing the agents
2023-11-04 09:13:37	INFO	AgentFlagger::initAgents	There are initially 1 agents in the list. Agents: manual
2023-11-04 09:13:37	INFO	Manual::setAgentParameters 	autocorr is 0
2023-11-04 09:13:37	INFO	AgentFlagger::initAgents	There are 1 valid agents in the list. Agents: manual
2023-11-04 09:13:37	INFO	flagdata::::casa	Running the agentflagger tool
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:37	INFO	FlagCalTableHandler::	Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:37	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:37	INFO	FlagCalTableHandler::nextChunk 	==================================================================================== 
2023-11-04 09:13:37	INFO	Manual::tableSummary	=> Percentage of data flagged in table selection: 100%
2023-11-04 09:13:37	INFO	AgentFlagger::run	=> Writing flags to the MS
2023-11-04 09:13:37	INFO	flagdata::::casa	Task flagdata complete. Start time: 2023-11-04 09:13:36.558240 End time: 2023-11-04 09:13:36.601595
2023-11-04 09:13:37	INFO	flagdata::::casa	##### End Task: flagdata             #####
2023-11-04 09:13:37	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:37	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:37	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:37	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01' )
2023-11-04 09:13:37	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:37	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:37	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:37	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:37	INFO	rerefant::::	Applying refant: VA01 refantmode = strict (flag all antennas when refant flagged)
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/09:28:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/09:40:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/09:50:45.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/10:22:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/10:34:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::::	At 1995/04/13/10:46:15.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:37	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:37	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:37	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:36.605989 End time: 2023-11-04 09:13:36.744243
2023-11-04 09:13:37	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:37	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:37	INFO	fringefit::::casa	##########################################
2023-11-04 09:13:37	INFO	fringefit::::casa	##### Begin Task: fringefit          #####
2023-11-04 09:13:37	INFO	fringefit::::casa	fringefit( vis='n08c1_reref.ms', caltable='fringe.cal', field='', spw='', intent='', selectdata=True, timerange='', uvrange='', antenna='', scan='', observation='', msselect='', solint='inf', combine='', refant='EF', minsnr=3.0, zerorates=False, globalsolve=True, niter=100, delaywindow=[], ratewindow=[], append=False, corrdepflags=False, corrcomb='none', docallib=False, callib='', gaintable=[], gainfield=[], interp=[], spwmap=[], paramactive=[], concatspws=True, parang=False )
2023-11-04 09:13:37	INFO	fringefit::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:37	INFO	fringefit::calibrater::open	Opening MS: n08c1_reref.ms for calibration.
2023-11-04 09:13:37	INFO	fringefit::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:37	INFO	fringefit::::casa	Selecting data
2023-11-04 09:13:37	INFO	calibrater::setdata	Beginning selectvis--(MSSelection version)-------
2023-11-04 09:13:37	INFO	calibrater::reset	Reseting solve/apply state
2023-11-04 09:13:37	INFO	Calibrater::selectvis	Performing selection on MeasurementSet
2023-11-04 09:13:37	INFO	Calibrater::selectvis	Selection did not drop any rows
2023-11-04 09:13:37	INFO	Calibrater::selectvis	Frequency selection: Selecting all channels in all spws.
2023-11-04 09:13:37	INFO	calibrater::setdata	chanmode=none nchan=1 start=0 step=1 mStart='0km/s' mStep='0km/s' msSelect=''
2023-11-04 09:13:37	INFO	calibrater::setsolve	Beginning setsolve--(MSSelection version)-------
2023-11-04 09:13:37	INFO	Calibrater::setsolve	Arranging to SOLVE:
2023-11-04 09:13:37	INFO	Calibrater::setsolve	.   Fringe Jones: table=fringe.cal append=false solint=inf refantmode='flex' refant='EF' minsnr=3 apmode=AP solnorm=false
2023-11-04 09:13:37	INFO	calibrater::solve	Beginning solve-----------------------------
2023-11-04 09:13:37	INFO	Calibrater::solve	The following calibration terms are arranged for apply:
2023-11-04 09:13:37	INFO	Calibrater::solve	.   (None)
2023-11-04 09:13:37	INFO	Calibrater::solve	The following calibration term is arranged for solve:
2023-11-04 09:13:37	INFO	Calibrater::solve	.   Fringe Jones: table=fringe.cal append=false solint=inf refantmode='flex' refant='EF' minsnr=3 apmode=AP solnorm=false
2023-11-04 09:13:37	INFO	FreqMetaData::calcFreqMeta	Derived frequency meta-info for solutions:
2023-11-04 09:13:37	INFO	FreqMetaData::calcFreqMeta	 Selected spw=0 (nchan=1) has centroid freq = 4978365000
2023-11-04 09:13:37	INFO	FreqMetaData::calcFreqMeta	 Selected spw=1 (nchan=1) has centroid freq = 4986365000
2023-11-04 09:13:37	INFO	FreqMetaData::calcFreqMeta	 Selected spw=2 (nchan=1) has centroid freq = 4994365000
2023-11-04 09:13:37	INFO	FreqMetaData::calcFreqMeta	 Selected spw=3 (nchan=1) has centroid freq = 5002365000
2023-11-04 09:13:37	INFO	Calibrater::solve	For solint = inf, found 8 solution intervals.
2023-11-04 09:13:37	INFO		Solving for fringes for spw=0 at t=2008/03/10/17:07:31.4
2023-11-04 09:13:37	INFO		Using reference antenna 0
2023-11-04 09:13:38	INFO		sPok [8, 11]
2023-11-04 09:13:38	INFO		Antenna 1 correlation 0 has (FFT) SNR of 484.442.
2023-11-04 09:13:38	INFO		Antenna 3 correlation 0 has (FFT) SNR of 3391.69.
2023-11-04 09:13:38	INFO		Antenna 1 correlation 1 has (FFT) SNR of 507.895.
2023-11-04 09:13:38	INFO		Antenna 3 correlation 1 has (FFT) SNR of 3257.34.
2023-11-04 09:13:38	INFO		Starting least squares optimization.
2023-11-04 09:13:38	INFO		Least squares complete for correlation 0 after 5 iterations.
2023-11-04 09:13:38	INFO		Least squares complete for correlation 1 after 4 iterations.
2023-11-04 09:13:38	INFO		Solving for fringes for spw=1 at t=2008/03/10/17:07:31.4
2023-11-04 09:13:38	INFO		Using reference antenna 0
2023-11-04 09:13:39	INFO		sPok [8, 11]
2023-11-04 09:13:39	INFO		Antenna 1 correlation 0 has (FFT) SNR of 864.329.
2023-11-04 09:13:39	INFO		Antenna 3 correlation 0 has (FFT) SNR of 2050.59.
2023-11-04 09:13:39	INFO		Antenna 1 correlation 1 has (FFT) SNR of 819.961.
2023-11-04 09:13:39	INFO		Antenna 3 correlation 1 has (FFT) SNR of 3523.29.
2023-11-04 09:13:39	INFO		Starting least squares optimization.
2023-11-04 09:13:39	INFO		Least squares complete for correlation 0 after 4 iterations.
2023-11-04 09:13:39	INFO		Least squares complete for correlation 1 after 4 iterations.
2023-11-04 09:13:40	INFO		Solving for fringes for spw=2 at t=2008/03/10/17:07:31.4
2023-11-04 09:13:40	INFO		Using reference antenna 0
2023-11-04 09:13:40	INFO		sPok [8, 11]
2023-11-04 09:13:40	INFO		Antenna 1 correlation 0 has (FFT) SNR of 871.329.
2023-11-04 09:13:40	INFO		Antenna 3 correlation 0 has (FFT) SNR of 3467.03.
2023-11-04 09:13:40	INFO		Antenna 1 correlation 1 has (FFT) SNR of 1702.26.
2023-11-04 09:13:40	INFO		Antenna 3 correlation 1 has (FFT) SNR of 4272.89.
2023-11-04 09:13:40	INFO		Starting least squares optimization.
2023-11-04 09:13:40	INFO		Least squares complete for correlation 0 after 4 iterations.
2023-11-04 09:13:40	INFO		Least squares complete for correlation 1 after 3 iterations.
2023-11-04 09:13:41	INFO		Solving for fringes for spw=3 at t=2008/03/10/17:07:31.4
2023-11-04 09:13:41	INFO		Using reference antenna 0
2023-11-04 09:13:42	INFO		sPok [8, 11]
2023-11-04 09:13:42	INFO		Antenna 1 correlation 0 has (FFT) SNR of 631.846.
2023-11-04 09:13:42	INFO		Antenna 3 correlation 0 has (FFT) SNR of 3582.43.
2023-11-04 09:13:42	INFO		Antenna 1 correlation 1 has (FFT) SNR of 448.963.
2023-11-04 09:13:42	INFO		Antenna 3 correlation 1 has (FFT) SNR of 2690.43.
2023-11-04 09:13:42	INFO		Starting least squares optimization.
2023-11-04 09:13:42	INFO		Least squares complete for correlation 0 after 4 iterations.
2023-11-04 09:13:42	INFO		Least squares complete for correlation 1 after 5 iterations.
2023-11-04 09:13:42	INFO		Solving for fringes for spw=0 at t=2008/03/10/17:10:00.5
2023-11-04 09:13:42	INFO		Using reference antenna 0
2023-11-04 09:13:42	INFO		sPok [8, 11]
2023-11-04 09:13:42	INFO		Antenna 1 correlation 0 has (FFT) SNR of 135.909.
2023-11-04 09:13:42	INFO		Antenna 3 correlation 0 has (FFT) SNR of 148.651.
2023-11-04 09:13:42	INFO		Antenna 1 correlation 1 has (FFT) SNR of 145.391.
2023-11-04 09:13:42	INFO		Antenna 3 correlation 1 has (FFT) SNR of 129.134.
2023-11-04 09:13:42	INFO		Starting least squares optimization.
2023-11-04 09:13:43	INFO		Least squares complete for correlation 0 after 10 iterations.
2023-11-04 09:13:43	INFO		Least squares complete for correlation 1 after 8 iterations.
2023-11-04 09:13:43	INFO		Solving for fringes for spw=1 at t=2008/03/10/17:10:00.5
2023-11-04 09:13:43	INFO		Using reference antenna 0
2023-11-04 09:13:43	INFO		sPok [8, 11]
2023-11-04 09:13:43	INFO		Antenna 1 correlation 0 has (FFT) SNR of 194.479.
2023-11-04 09:13:43	INFO		Antenna 3 correlation 0 has (FFT) SNR of 138.368.
2023-11-04 09:13:43	INFO		Antenna 1 correlation 1 has (FFT) SNR of 183.276.
2023-11-04 09:13:43	INFO		Antenna 3 correlation 1 has (FFT) SNR of 146.912.
2023-11-04 09:13:43	INFO		Starting least squares optimization.
2023-11-04 09:13:43	INFO		Least squares complete for correlation 0 after 8 iterations.
2023-11-04 09:13:44	INFO		Least squares complete for correlation 1 after 8 iterations.
2023-11-04 09:13:44	INFO		Solving for fringes for spw=2 at t=2008/03/10/17:10:00.5
2023-11-04 09:13:44	INFO		Using reference antenna 0
2023-11-04 09:13:44	INFO		sPok [8, 11]
2023-11-04 09:13:44	INFO		Antenna 1 correlation 0 has (FFT) SNR of 186.755.
2023-11-04 09:13:44	INFO		Antenna 3 correlation 0 has (FFT) SNR of 130.867.
2023-11-04 09:13:44	INFO		Antenna 1 correlation 1 has (FFT) SNR of 208.845.
2023-11-04 09:13:44	INFO		Antenna 3 correlation 1 has (FFT) SNR of 139.975.
2023-11-04 09:13:44	INFO		Starting least squares optimization.
2023-11-04 09:13:44	INFO		Least squares complete for correlation 0 after 8 iterations.
2023-11-04 09:13:44	INFO		Least squares complete for correlation 1 after 8 iterations.
2023-11-04 09:13:45	INFO		Solving for fringes for spw=3 at t=2008/03/10/17:10:00.5
2023-11-04 09:13:45	INFO		Using reference antenna 0
2023-11-04 09:13:45	INFO		sPok [8, 11]
2023-11-04 09:13:45	INFO		Antenna 1 correlation 0 has (FFT) SNR of 159.663.
2023-11-04 09:13:45	INFO		Antenna 3 correlation 0 has (FFT) SNR of 132.301.
2023-11-04 09:13:45	INFO		Antenna 1 correlation 1 has (FFT) SNR of 138.049.
2023-11-04 09:13:45	INFO		Antenna 3 correlation 1 has (FFT) SNR of 140.275.
2023-11-04 09:13:45	INFO		Starting least squares optimization.
2023-11-04 09:13:45	INFO		Least squares complete for correlation 0 after 8 iterations.
2023-11-04 09:13:45	INFO		Least squares complete for correlation 1 after 8 iterations.
2023-11-04 09:13:45	INFO	Calibrater::solve	  Found good Fringe Jones solutions in 8 solution intervals.
2023-11-04 09:13:45	INFO		Applying refant: EF refantmode = flex (hold alternate refants' phase constant) when refant flagged
2023-11-04 09:13:45	INFO		Writing solutions to table: fringe.cal
2023-11-04 09:13:46	INFO	Calibrater::solve	----- PER ANTENNA INFO -----
2023-11-04 09:13:46	INFO	Calibrater::solve	       ANT: 0    ANT: 1    ANT: 2    ANT: 3    ANT: 4    ANT: 5    ANT: 6    ANT: 7    ANT: 8    ANT: 9    ANT: 10   
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 0 [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0] 
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 1 [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0] 
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 2 [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0] 
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 3 [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0]  [0, 0, 0, 0, 0, 0, 0, 0] 
2023-11-04 09:13:46	INFO	Calibrater::solve	----- PER SPW INFO -----
2023-11-04 09:13:46	INFO	Calibrater::solve	       expected  data_unflagged  above_minblperant  above_minsnr
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 0 [2, 2, 2, 2, 2, 2, 2, 2]  [2, 2, 0, 0, 0, 0, 0, 0]        [0, 0, 0, 0, 0, 0, 0, 0]            [0, 0, 0, 0, 0, 0, 0, 0]
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 1 [2, 2, 2, 2, 2, 2, 2, 2]  [2, 2, 0, 0, 0, 0, 0, 0]        [0, 0, 0, 0, 0, 0, 0, 0]            [0, 0, 0, 0, 0, 0, 0, 0]
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 2 [2, 2, 2, 2, 2, 2, 2, 2]  [2, 2, 0, 0, 0, 0, 0, 0]        [0, 0, 0, 0, 0, 0, 0, 0]            [0, 0, 0, 0, 0, 0, 0, 0]
2023-11-04 09:13:46	INFO	Calibrater::solve	SPW: 3 [2, 2, 2, 2, 2, 2, 2, 2]  [2, 2, 0, 0, 0, 0, 0, 0]        [0, 0, 0, 0, 0, 0, 0, 0]            [0, 0, 0, 0, 0, 0, 0, 0]
2023-11-04 09:13:46	INFO	Calibrater::solve	----- GLOBAL INFO -----
2023-11-04 09:13:46	INFO	Calibrater::solve	expected  data_unflagged  above_minblperant  above_minsnr
2023-11-04 09:13:46	INFO	Calibrater::solve	[8, 8, 8, 8, 8, 8, 8, 8]  [8, 8, 0, 0, 0, 0, 0, 0]        [0, 0, 0, 0, 0, 0, 0, 0]            [0, 0, 0, 0, 0, 0, 0, 0]
2023-11-04 09:13:46	INFO	calibrater::solve	Finished solving.
2023-11-04 09:13:46	INFO	fringefit::::casa	Calibration solve statistics per spw:  (expected/attempted/succeeded):
2023-11-04 09:13:46	INFO	fringefit::::casa	  Spw 0: 2/2/2
2023-11-04 09:13:46	INFO	fringefit::::casa	  Spw 1: 2/2/2
2023-11-04 09:13:46	INFO	fringefit::::casa	  Spw 2: 2/2/2
2023-11-04 09:13:46	INFO	fringefit::::casa	  Spw 3: 2/2/2
2023-11-04 09:13:46	INFO	fringefit::::casa	Task fringefit complete. Start time: 2023-11-04 09:13:36.968348 End time: 2023-11-04 09:13:45.530424
2023-11-04 09:13:46	INFO	fringefit::::casa	##### End Task: fringefit            #####
2023-11-04 09:13:46	INFO	fringefit::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:46	INFO	rerefant::::casa	rerefant( vis='n08c1_reref.ms', tablein='fringe.cal', caltable='reref.cal', refantmode='flex', refant='ON' )
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	Opening MS: n08c1_reref.ms for calibration.
2023-11-04 09:13:46	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:46	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:46	INFO	rerefant::::	Applying refant: ON refantmode = flex (hold alternate refants' phase constant) when refant flagged
2023-11-04 09:13:46	INFO	rerefant::Calibrater::reRefant	Storing result in reref.cal
2023-11-04 09:13:46	INFO	rerefant::::	Writing solutions to table: reref.cal
2023-11-04 09:13:46	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:45.532356 End time: 2023-11-04 09:13:45.692285
2023-11-04 09:13:46	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:46	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:46	INFO	flagdata::::casa	##### Begin Task: flagdata           #####
2023-11-04 09:13:46	INFO	flagdata::::casa	flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='1~3', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True )
2023-11-04 09:13:46	INFO	flagdata::::casa	Backup original flags before applying new flags
2023-11-04 09:13:46	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:46	INFO	FlagVersion::saveFlagVersion	Creating new backup flag file called flagdata_2
2023-11-04 09:13:46	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:46	INFO	flagdata::::casa	Manual mode is active
2023-11-04 09:13:46	INFO	FlagCalTableHandler::selectData 	Original CalTable has 196 rows, and selected CalTable has 3 rows
2023-11-04 09:13:46	INFO	flagdata::::casa	Initializing the agents
2023-11-04 09:13:46	INFO	AgentFlagger::initAgents	There are initially 1 agents in the list. Agents: manual
2023-11-04 09:13:46	INFO	Manual::setAgentParameters 	autocorr is 0
2023-11-04 09:13:46	INFO	AgentFlagger::initAgents	There are 1 valid agents in the list. Agents: manual
2023-11-04 09:13:46	INFO	flagdata::::casa	Running the agentflagger tool
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 1 [progress: 33%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 2 [progress: 66%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 3 [progress: 100%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::nextChunk 	==================================================================================== 
2023-11-04 09:13:46	INFO	Manual::tableSummary	=> Percentage of data flagged in table selection: 100%
2023-11-04 09:13:46	INFO	AgentFlagger::run	=> Writing flags to the MS
2023-11-04 09:13:46	INFO	flagdata::::casa	Task flagdata complete. Start time: 2023-11-04 09:13:45.834901 End time: 2023-11-04 09:13:45.878795
2023-11-04 09:13:46	INFO	flagdata::::casa	##### End Task: flagdata             #####
2023-11-04 09:13:46	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:46	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01,VA02' )
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:46	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:46	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:46	INFO	rerefant::::	Applying refant: VA01 (VA02) refantmode = flex (hold alternate refants' phase constant) when refant flagged
2023-11-04 09:13:46	INFO	rerefant::::	At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), using refant VA02 (id=1) (alternate)
2023-11-04 09:13:46	INFO	rerefant::::	 NB: An alternate refant was used at least once to maintain
2023-11-04 09:13:46	INFO	rerefant::::+	  phase continuity where the user's preferred refant drops out.
2023-11-04 09:13:46	INFO	rerefant::::+	  Alternate refants are held constant in phase (_not_ zeroed)
2023-11-04 09:13:46	INFO	rerefant::::+	  during these periods, and the preferred refant may return at
2023-11-04 09:13:46	INFO	rerefant::::+	  a non-zero phase.  This is generally harmless.
2023-11-04 09:13:46	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:46	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:46	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:45.880077 End time: 2023-11-04 09:13:46.061925
2023-11-04 09:13:46	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:46	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:46	INFO	flagdata::::casa	##### Begin Task: flagdata           #####
2023-11-04 09:13:46	INFO	flagdata::::casa	flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True )
2023-11-04 09:13:46	INFO	flagdata::::casa	Backup original flags before applying new flags
2023-11-04 09:13:46	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:46	INFO	FlagVersion::saveFlagVersion	Creating new backup flag file called flagdata_3
2023-11-04 09:13:46	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:46	INFO	flagdata::::casa	Manual mode is active
2023-11-04 09:13:46	INFO	FlagCalTableHandler::selectData 	Original CalTable has 196 rows, and selected CalTable has 7 rows
2023-11-04 09:13:46	INFO	flagdata::::casa	Initializing the agents
2023-11-04 09:13:46	INFO	AgentFlagger::initAgents	There are initially 1 agents in the list. Agents: manual
2023-11-04 09:13:46	INFO	Manual::setAgentParameters 	autocorr is 0
2023-11-04 09:13:46	INFO	AgentFlagger::initAgents	There are 1 valid agents in the list. Agents: manual
2023-11-04 09:13:46	INFO	flagdata::::casa	Running the agentflagger tool
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:46	INFO	FlagCalTableHandler::	Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:46	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:46	INFO	FlagCalTableHandler::nextChunk 	==================================================================================== 
2023-11-04 09:13:46	INFO	Manual::tableSummary	=> Percentage of data flagged in table selection: 100%
2023-11-04 09:13:46	INFO	AgentFlagger::run	=> Writing flags to the MS
2023-11-04 09:13:46	INFO	flagdata::::casa	Task flagdata complete. Start time: 2023-11-04 09:13:46.191616 End time: 2023-11-04 09:13:46.250429
2023-11-04 09:13:46	INFO	flagdata::::casa	##### End Task: flagdata             #####
2023-11-04 09:13:46	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:46	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:46	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01,VA02' )
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:46	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:46	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:46	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:46	INFO	rerefant::::	Applying refant: VA01 (VA02) refantmode = flex (hold alternate refants' phase constant) when refant flagged
2023-11-04 09:13:46	INFO	rerefant::::	At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), using refant VA02 (id=1) (alternate)
2023-11-04 09:13:46	INFO	rerefant::::	 NB: An alternate refant was used at least once to maintain
2023-11-04 09:13:46	INFO	rerefant::::+	  phase continuity where the user's preferred refant drops out.
2023-11-04 09:13:46	INFO	rerefant::::+	  Alternate refants are held constant in phase (_not_ zeroed)
2023-11-04 09:13:46	INFO	rerefant::::+	  during these periods, and the preferred refant may return at
2023-11-04 09:13:46	INFO	rerefant::::+	  a non-zero phase.  This is generally harmless.
2023-11-04 09:13:46	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:46	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:46	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:46.252288 End time: 2023-11-04 09:13:46.421370
2023-11-04 09:13:46	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:46	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:47	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:47	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01' )
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:47	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:47	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:47	INFO	rerefant::::	Applying refant: VA01 refantmode = flex (hold alternate refants' phase constant) when refant flagged
2023-11-04 09:13:47	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:47	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:47	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:46.515355 End time: 2023-11-04 09:13:46.649853
2023-11-04 09:13:47	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:47	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:47	INFO	flagdata::::casa	##### Begin Task: flagdata           #####
2023-11-04 09:13:47	INFO	flagdata::::casa	flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True )
2023-11-04 09:13:47	INFO	flagdata::::casa	Backup original flags before applying new flags
2023-11-04 09:13:47	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:47	INFO	FlagVersion::saveFlagVersion	Creating new backup flag file called flagdata_4
2023-11-04 09:13:47	INFO	AgentFlagger::open	Table type is Calibration
2023-11-04 09:13:47	INFO	flagdata::::casa	Manual mode is active
2023-11-04 09:13:47	INFO	FlagCalTableHandler::selectData 	Original CalTable has 196 rows, and selected CalTable has 7 rows
2023-11-04 09:13:47	INFO	flagdata::::casa	Initializing the agents
2023-11-04 09:13:47	INFO	AgentFlagger::initAgents	There are initially 1 agents in the list. Agents: manual
2023-11-04 09:13:47	INFO	Manual::setAgentParameters 	autocorr is 0
2023-11-04 09:13:47	INFO	AgentFlagger::initAgents	There are 1 valid agents in the list. Agents: manual
2023-11-04 09:13:47	INFO	flagdata::::casa	Running the agentflagger tool
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	------------------------------------------------------------------------------------ 
2023-11-04 09:13:47	INFO	FlagCalTableHandler::	Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1
2023-11-04 09:13:47	INFO	Manual::chunkSummary	=> Data flagged so far 100% (2/2)
2023-11-04 09:13:47	INFO	FlagCalTableHandler::nextChunk 	==================================================================================== 
2023-11-04 09:13:47	INFO	Manual::tableSummary	=> Percentage of data flagged in table selection: 100%
2023-11-04 09:13:47	INFO	AgentFlagger::run	=> Writing flags to the MS
2023-11-04 09:13:47	INFO	flagdata::::casa	Task flagdata complete. Start time: 2023-11-04 09:13:46.733334 End time: 2023-11-04 09:13:46.769841
2023-11-04 09:13:47	INFO	flagdata::::casa	##### End Task: flagdata             #####
2023-11-04 09:13:47	INFO	flagdata::::casa	##########################################
2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:47	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:47	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01, VA02' )
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:47	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:47	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:47	INFO	rerefant::::	Applying refant: VA01 (VA02) refantmode = strict (flag all antennas when refant flagged)
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/09:28:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/09:40:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/09:50:45.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/10:22:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/10:34:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::::	At 1995/04/13/10:46:15.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly.
2023-11-04 09:13:47	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:47	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:47	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:46.770908 End time: 2023-11-04 09:13:46.900095
2023-11-04 09:13:47	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
.2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
2023-11-04 09:13:47	INFO	rerefant::::casa	##### Begin Task: rerefant           #####
2023-11-04 09:13:47	INFO	rerefant::::casa	rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01' )
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	****Using NEW VI2-driven calibrater tool****
2023-11-04 09:13:47	INFO	rerefant::calibrater::open	Opening MS: vis.ms for calibration.
2023-11-04 09:13:47	INFO	rerefant::Calibrater::	Initializing nominal selection to the whole MS.
2023-11-04 09:13:47	INFO	rerefant::calibrater::rerefant	Beginning rerefant--(MSSelection version)-------
2023-11-04 09:13:47	INFO	rerefant::::	Applying refant: VA01 refantmode = strict (flag all antennas when refant flagged)
2023-11-04 09:13:47	INFO	rerefant::Calibrater::reRefant	Storing result in out.cal
2023-11-04 09:13:47	INFO	rerefant::::	Writing solutions to table: out.cal
2023-11-04 09:13:47	INFO	rerefant::::casa	Task rerefant complete. Start time: 2023-11-04 09:13:47.003559 End time: 2023-11-04 09:13:47.168946
2023-11-04 09:13:47	INFO	rerefant::::casa	##### End Task: rerefant             #####
2023-11-04 09:13:47	INFO	rerefant::::casa	##########################################
.
Using configuration file ~/.casa/config.py

Using matplotlib backend: agg
CASA 6.6.0.11a14200.dev7 -- Common Astronomy Software Applications [6.6.0.11a14200.dev7]

----------------------------------------------------------------------
Ran 7 tests in 10.729s

OK