2024-09-24 19:09:58 INFO ::casa Using user configuration file /home/casatest/.casa/config.py 2024-09-24 19:09:58 INFO ::casa loaded config file : /wheeldirectory/casa-CAS-14371-4-py3.8.el8/lib/py/lib/python3.8/site-packages/casaconfig/config.py 2024-09-24 19:09:58 INFO ::casa loaded config file : /home/casatest/.casa/config.py 2024-09-24 19:09:58 INFO ::casa 2024-09-24 19:09:58 INFO ::casa config values 2024-09-24 19:09:58 INFO ::casa agg = False 2024-09-24 19:09:58 INFO ::casa cachedir = '/home/casatest/.casa' 2024-09-24 19:09:58 INFO ::casa casaconfig_verbose = 1 2024-09-24 19:09:58 INFO ::casa colors = 'Neutral' 2024-09-24 19:09:58 INFO ::casa data_auto_update = False 2024-09-24 19:09:58 INFO ::casa datapath = ['/opt/casa/data/master', '/opt/casa/data/casatestdata'] 2024-09-24 19:09:58 INFO ::casa iplog = False 2024-09-24 19:09:58 INFO ::casa iplogfile = '/home/casatest/casa6/casatasks/tests/casashell_tests/work/test_task_rerefant_casashell/ipython-20240924-190955.log' 2024-09-24 19:09:58 INFO ::casa log2term = True 2024-09-24 19:09:58 INFO ::casa logfile = '/home/casatest/casa6/casatasks/tests/casashell_tests/work/test_task_rerefant_casashell/casa-20240924-190955.log' 2024-09-24 19:09:58 INFO ::casa measures_auto_update = False 2024-09-24 19:09:58 INFO ::casa measurespath = '/opt/casa/data/master' 2024-09-24 19:09:58 INFO ::casa nogui = False 2024-09-24 19:09:58 INFO ::casa nologfile = False 2024-09-24 19:09:58 INFO ::casa nologger = True 2024-09-24 19:09:58 INFO ::casa pipeline = False 2024-09-24 19:09:58 INFO ::casa startupfile = '/home/casatest/.casa/startup.py' 2024-09-24 19:09:58 INFO ::casa user_site = False 2024-09-24 19:09:58 INFO ::casa 2024-09-24 19:09:58 INFO ::casa casarundata version is unknown, this is probably a legacy version not installed by casaconfig 2024-09-24 19:09:58 INFO ::casa measures version is unknown, this is probably a legacy version not installed by casaconfig 2024-09-24 19:09:58 INFO ::casa 2024-09-24 19:09:58 INFO ::casa Checking Measures tables in data repository sub-directory /opt/casa/data/master/geodetic 2024-09-24 19:09:58 INFO ::casa IERSeop2000 (version date, last date in table (UTC)): 2024/08/31/15:00, 2024/08/01/00:00:00 2024-09-24 19:09:58 INFO ::casa IERSeop97 (version date, last date in table (UTC)): 2024/08/31/15:00, 2024/08/01/00:00:00 2024-09-24 19:09:58 INFO ::casa IERSpredict (version date, last date in table (UTC)): 2024/09/23/15:00, 2024/12/22/00:00:00 2024-09-24 19:09:58 INFO ::casa TAI_UTC (version date, last date in table (UTC)): 2024/08/28/15:00, 2017/01/01/00:00:00 2024-09-24 19:09:58 INFO flagdata::::casa ########################################## 2024-09-24 19:09:58 INFO flagdata::::casa ##### Begin Task: flagdata ##### 2024-09-24 19:09:58 INFO flagdata::::casa flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True ) 2024-09-24 19:09:58 INFO flagdata::::casa Backup original flags before applying new flags 2024-09-24 19:09:58 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:09:58 INFO FlagVersion::saveFlagVersion Creating new backup flag file called flagdata_1 2024-09-24 19:09:58 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:09:58 INFO flagdata::::casa Manual mode is active 2024-09-24 19:09:58 INFO FlagCalTableHandler::selectData Original CalTable has 196 rows, and selected CalTable has 7 rows 2024-09-24 19:09:58 INFO flagdata::::casa Initializing the agents 2024-09-24 19:09:58 INFO AgentFlagger::initAgents There are initially 1 agents in the list. Agents: manual 2024-09-24 19:09:58 INFO Manual::setAgentParameters autocorr is 0 2024-09-24 19:09:58 INFO AgentFlagger::initAgents There are 1 valid agents in the list. Agents: manual 2024-09-24 19:09:58 INFO flagdata::::casa Running the agentflagger tool 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:09:58 INFO FlagCalTableHandler:: Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:09:58 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:09:58 INFO FlagCalTableHandler::nextChunk ==================================================================================== 2024-09-24 19:09:58 INFO Manual::tableSummary => Percentage of data flagged in table selection: 100% 2024-09-24 19:09:58 INFO AgentFlagger::run => Writing flags to the MS 2024-09-24 19:09:58 INFO flagdata::::casa Task flagdata complete. Start time: 2024-09-24 19:09:57.662713 End time: 2024-09-24 19:09:57.732384 2024-09-24 19:09:58 INFO flagdata::::casa ##### End Task: flagdata ##### 2024-09-24 19:09:58 INFO flagdata::::casa ########################################## 2024-09-24 19:09:58 INFO rerefant::::casa ########################################## 2024-09-24 19:09:58 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:09:58 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01' ) 2024-09-24 19:09:58 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:09:58 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:09:58 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:09:58 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:09:58 INFO rerefant:::: Applying refant: VA01 refantmode = strict (flag all antennas when refant flagged) 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/09:28:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/09:40:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/09:50:45.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/10:22:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/10:34:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant:::: At 1995/04/13/10:46:15.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:09:58 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:09:58 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:09:58 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:09:57.739696 End time: 2024-09-24 19:09:57.924408 2024-09-24 19:09:58 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:09:58 INFO rerefant::::casa ########################################## 2024-09-24 19:09:58 INFO fringefit::::casa ########################################## 2024-09-24 19:09:58 INFO fringefit::::casa ##### Begin Task: fringefit ##### 2024-09-24 19:09:58 INFO fringefit::::casa fringefit( vis='n08c1_reref.ms', caltable='fringe.cal', field='', spw='', intent='', selectdata=True, timerange='', uvrange='', antenna='', scan='', observation='', msselect='', solint='inf', combine='', refant='EF', minsnr=3.0, zerorates=False, globalsolve=True, niter=100, delaywindow=[], ratewindow=[], append=False, corrdepflags=False, corrcomb='none', docallib=False, callib='', gaintable=[], gainfield=[], interp=[], spwmap=[], paramactive=[], concatspws=True, parang=False ) 2024-09-24 19:09:58 INFO fringefit::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:09:58 INFO fringefit::calibrater::open Opening MS: n08c1_reref.ms for calibration. 2024-09-24 19:09:58 INFO fringefit::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:09:58 INFO fringefit::::casa Selecting data 2024-09-24 19:09:58 INFO calibrater::setdata Beginning selectvis--(MSSelection version)------- 2024-09-24 19:09:58 INFO calibrater::reset Reseting solve/apply state 2024-09-24 19:09:58 INFO Calibrater::selectvis Performing selection on MeasurementSet 2024-09-24 19:09:58 INFO Calibrater::selectvis Selection did not drop any rows 2024-09-24 19:09:58 INFO Calibrater::selectvis Frequency selection: Selecting all channels in all spws. 2024-09-24 19:09:58 INFO calibrater::setdata chanmode=none nchan=1 start=0 step=1 mStart='0km/s' mStep='0km/s' msSelect='' 2024-09-24 19:09:58 INFO calibrater::setsolve Beginning setsolve--(MSSelection version)------- 2024-09-24 19:09:58 INFO Calibrater::setsolve Arranging to SOLVE: 2024-09-24 19:09:58 INFO Calibrater::setsolve . Fringe Jones: table=fringe.cal append=false solint=inf refantmode='flex' refant='EF' minsnr=3 apmode=AP solnorm=false 2024-09-24 19:09:58 INFO calibrater::solve Beginning solve----------------------------- 2024-09-24 19:09:58 INFO Calibrater::solve The following calibration terms are arranged for apply: 2024-09-24 19:09:58 INFO Calibrater::solve . (None) 2024-09-24 19:09:58 INFO Calibrater::solve The following calibration term is arranged for solve: 2024-09-24 19:09:58 INFO Calibrater::solve . Fringe Jones: table=fringe.cal append=false solint=inf refantmode='flex' refant='EF' minsnr=3 apmode=AP solnorm=false 2024-09-24 19:09:58 INFO FreqMetaData::calcFreqMeta Derived frequency meta-info for solutions: 2024-09-24 19:09:58 INFO FreqMetaData::calcFreqMeta Selected spw=0 (nchan=1) has centroid freq = 4978365000 2024-09-24 19:09:58 INFO FreqMetaData::calcFreqMeta Selected spw=1 (nchan=1) has centroid freq = 4986365000 2024-09-24 19:09:58 INFO FreqMetaData::calcFreqMeta Selected spw=2 (nchan=1) has centroid freq = 4994365000 2024-09-24 19:09:58 INFO FreqMetaData::calcFreqMeta Selected spw=3 (nchan=1) has centroid freq = 5002365000 2024-09-24 19:09:58 INFO Calibrater::solve For solint = inf, found 8 solution intervals. 2024-09-24 19:09:58 INFO Solving for fringes for spw=0 at t=2008/03/10/17:07:31.4 2024-09-24 19:09:58 INFO Using reference antenna 0 2024-09-24 19:09:59 INFO sPok [8, 11] 2024-09-24 19:09:59 INFO Antenna 1 correlation 0 has (FFT) SNR of 484.442. 2024-09-24 19:09:59 INFO Antenna 3 correlation 0 has (FFT) SNR of 3391.69. 2024-09-24 19:09:59 INFO Antenna 1 correlation 1 has (FFT) SNR of 507.895. 2024-09-24 19:09:59 INFO Antenna 3 correlation 1 has (FFT) SNR of 3257.34. 2024-09-24 19:09:59 INFO Starting least squares optimization. 2024-09-24 19:09:59 INFO Least squares complete for correlation 0 after 5 iterations. 2024-09-24 19:09:59 INFO Least squares complete for correlation 1 after 4 iterations. 2024-09-24 19:10:00 INFO Solving for fringes for spw=1 at t=2008/03/10/17:07:31.4 2024-09-24 19:10:00 INFO Using reference antenna 0 2024-09-24 19:10:00 INFO sPok [8, 11] 2024-09-24 19:10:00 INFO Antenna 1 correlation 0 has (FFT) SNR of 864.329. 2024-09-24 19:10:00 INFO Antenna 3 correlation 0 has (FFT) SNR of 2050.59. 2024-09-24 19:10:00 INFO Antenna 1 correlation 1 has (FFT) SNR of 819.961. 2024-09-24 19:10:00 INFO Antenna 3 correlation 1 has (FFT) SNR of 3523.29. 2024-09-24 19:10:00 INFO Starting least squares optimization. 2024-09-24 19:10:00 INFO Least squares complete for correlation 0 after 4 iterations. 2024-09-24 19:10:01 INFO Least squares complete for correlation 1 after 4 iterations. 2024-09-24 19:10:01 INFO Solving for fringes for spw=2 at t=2008/03/10/17:07:31.4 2024-09-24 19:10:01 INFO Using reference antenna 0 2024-09-24 19:10:01 INFO sPok [8, 11] 2024-09-24 19:10:01 INFO Antenna 1 correlation 0 has (FFT) SNR of 871.329. 2024-09-24 19:10:01 INFO Antenna 3 correlation 0 has (FFT) SNR of 3467.03. 2024-09-24 19:10:01 INFO Antenna 1 correlation 1 has (FFT) SNR of 1702.26. 2024-09-24 19:10:01 INFO Antenna 3 correlation 1 has (FFT) SNR of 4272.89. 2024-09-24 19:10:01 INFO Starting least squares optimization. 2024-09-24 19:10:02 INFO Least squares complete for correlation 0 after 4 iterations. 2024-09-24 19:10:02 INFO Least squares complete for correlation 1 after 3 iterations. 2024-09-24 19:10:02 INFO Solving for fringes for spw=3 at t=2008/03/10/17:07:31.4 2024-09-24 19:10:02 INFO Using reference antenna 0 2024-09-24 19:10:02 INFO sPok [8, 11] 2024-09-24 19:10:03 INFO Antenna 1 correlation 0 has (FFT) SNR of 631.846. 2024-09-24 19:10:03 INFO Antenna 3 correlation 0 has (FFT) SNR of 3582.43. 2024-09-24 19:10:03 INFO Antenna 1 correlation 1 has (FFT) SNR of 448.963. 2024-09-24 19:10:03 INFO Antenna 3 correlation 1 has (FFT) SNR of 2690.43. 2024-09-24 19:10:03 INFO Starting least squares optimization. 2024-09-24 19:10:03 INFO Least squares complete for correlation 0 after 4 iterations. 2024-09-24 19:10:03 INFO Least squares complete for correlation 1 after 5 iterations. 2024-09-24 19:10:03 INFO Solving for fringes for spw=0 at t=2008/03/10/17:10:00.5 2024-09-24 19:10:03 INFO Using reference antenna 0 2024-09-24 19:10:03 INFO sPok [8, 11] 2024-09-24 19:10:03 INFO Antenna 1 correlation 0 has (FFT) SNR of 135.909. 2024-09-24 19:10:03 INFO Antenna 3 correlation 0 has (FFT) SNR of 148.651. 2024-09-24 19:10:03 INFO Antenna 1 correlation 1 has (FFT) SNR of 145.391. 2024-09-24 19:10:03 INFO Antenna 3 correlation 1 has (FFT) SNR of 129.134. 2024-09-24 19:10:03 INFO Starting least squares optimization. 2024-09-24 19:10:03 INFO Least squares complete for correlation 0 after 10 iterations. 2024-09-24 19:10:04 INFO Least squares complete for correlation 1 after 8 iterations. 2024-09-24 19:10:04 INFO Solving for fringes for spw=1 at t=2008/03/10/17:10:00.5 2024-09-24 19:10:04 INFO Using reference antenna 0 2024-09-24 19:10:04 INFO sPok [8, 11] 2024-09-24 19:10:04 INFO Antenna 1 correlation 0 has (FFT) SNR of 194.479. 2024-09-24 19:10:04 INFO Antenna 3 correlation 0 has (FFT) SNR of 138.368. 2024-09-24 19:10:04 INFO Antenna 1 correlation 1 has (FFT) SNR of 183.276. 2024-09-24 19:10:04 INFO Antenna 3 correlation 1 has (FFT) SNR of 146.912. 2024-09-24 19:10:04 INFO Starting least squares optimization. 2024-09-24 19:10:04 INFO Least squares complete for correlation 0 after 8 iterations. 2024-09-24 19:10:04 INFO Least squares complete for correlation 1 after 8 iterations. 2024-09-24 19:10:04 INFO Solving for fringes for spw=2 at t=2008/03/10/17:10:00.5 2024-09-24 19:10:04 INFO Using reference antenna 0 2024-09-24 19:10:05 INFO sPok [8, 11] 2024-09-24 19:10:05 INFO Antenna 1 correlation 0 has (FFT) SNR of 186.755. 2024-09-24 19:10:05 INFO Antenna 3 correlation 0 has (FFT) SNR of 130.867. 2024-09-24 19:10:05 INFO Antenna 1 correlation 1 has (FFT) SNR of 208.845. 2024-09-24 19:10:05 INFO Antenna 3 correlation 1 has (FFT) SNR of 139.975. 2024-09-24 19:10:05 INFO Starting least squares optimization. 2024-09-24 19:10:05 INFO Least squares complete for correlation 0 after 8 iterations. 2024-09-24 19:10:05 INFO Least squares complete for correlation 1 after 8 iterations. 2024-09-24 19:10:05 INFO Solving for fringes for spw=3 at t=2008/03/10/17:10:00.5 2024-09-24 19:10:05 INFO Using reference antenna 0 2024-09-24 19:10:06 INFO sPok [8, 11] 2024-09-24 19:10:06 INFO Antenna 1 correlation 0 has (FFT) SNR of 159.663. 2024-09-24 19:10:06 INFO Antenna 3 correlation 0 has (FFT) SNR of 132.301. 2024-09-24 19:10:06 INFO Antenna 1 correlation 1 has (FFT) SNR of 138.049. 2024-09-24 19:10:06 INFO Antenna 3 correlation 1 has (FFT) SNR of 140.275. 2024-09-24 19:10:06 INFO Starting least squares optimization. 2024-09-24 19:10:06 INFO Least squares complete for correlation 0 after 8 iterations. 2024-09-24 19:10:06 INFO Least squares complete for correlation 1 after 8 iterations. 2024-09-24 19:10:06 INFO Calibrater::solve Found good Fringe Jones solutions in 8 solution intervals. 2024-09-24 19:10:06 INFO Applying refant: EF refantmode = flex (hold alternate refants' phase constant) when refant flagged 2024-09-24 19:10:06 INFO Writing solutions to table: fringe.cal 2024-09-24 19:10:06 INFO Calibrater::solve ----- PER ANTENNA INFO ----- 2024-09-24 19:10:06 INFO Calibrater::solve ANT: 0 ANT: 1 ANT: 2 ANT: 3 ANT: 4 ANT: 5 ANT: 6 ANT: 7 ANT: 8 ANT: 9 ANT: 10 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 0 [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 1 [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 2 [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 3 [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve ----- PER SPW INFO ----- 2024-09-24 19:10:06 INFO Calibrater::solve expected data_unflagged above_minblperant above_minsnr 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 0 [2, 2, 2, 2, 2, 2, 2, 2] [2, 2, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 1 [2, 2, 2, 2, 2, 2, 2, 2] [2, 2, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 2 [2, 2, 2, 2, 2, 2, 2, 2] [2, 2, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve SPW: 3 [2, 2, 2, 2, 2, 2, 2, 2] [2, 2, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO Calibrater::solve ----- GLOBAL INFO ----- 2024-09-24 19:10:06 INFO Calibrater::solve expected data_unflagged above_minblperant above_minsnr 2024-09-24 19:10:06 INFO Calibrater::solve [8, 8, 8, 8, 8, 8, 8, 8] [8, 8, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] [0, 0, 0, 0, 0, 0, 0, 0] 2024-09-24 19:10:06 INFO calibrater::solve Finished solving. 2024-09-24 19:10:06 INFO fringefit::::casa Calibration solve statistics per spw: (expected/attempted/succeeded): 2024-09-24 19:10:06 INFO fringefit::::casa Spw 0: 2/2/2 2024-09-24 19:10:06 INFO fringefit::::casa Spw 1: 2/2/2 2024-09-24 19:10:06 INFO fringefit::::casa Spw 2: 2/2/2 2024-09-24 19:10:06 INFO fringefit::::casa Spw 3: 2/2/2 2024-09-24 19:10:06 INFO fringefit::::casa Task fringefit complete. Start time: 2024-09-24 19:09:58.155769 End time: 2024-09-24 19:10:06.076194 2024-09-24 19:10:06 INFO fringefit::::casa ##### End Task: fringefit ##### 2024-09-24 19:10:06 INFO fringefit::::casa ########################################## 2024-09-24 19:10:06 INFO rerefant::::casa ########################################## 2024-09-24 19:10:06 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:06 INFO rerefant::::casa rerefant( vis='n08c1_reref.ms', tablein='fringe.cal', caltable='reref.cal', refantmode='flex', refant='ON' ) 2024-09-24 19:10:06 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:06 INFO rerefant::calibrater::open Opening MS: n08c1_reref.ms for calibration. 2024-09-24 19:10:06 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:06 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:06 INFO rerefant:::: Applying refant: ON refantmode = flex (hold alternate refants' phase constant) when refant flagged 2024-09-24 19:10:06 INFO rerefant::Calibrater::reRefant Storing result in reref.cal 2024-09-24 19:10:06 INFO rerefant:::: Writing solutions to table: reref.cal 2024-09-24 19:10:06 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:06.078468 End time: 2024-09-24 19:10:06.278201 2024-09-24 19:10:06 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:06 INFO rerefant::::casa ########################################## 2024-09-24 19:10:06 INFO flagdata::::casa ########################################## 2024-09-24 19:10:06 INFO flagdata::::casa ##### Begin Task: flagdata ##### 2024-09-24 19:10:06 INFO flagdata::::casa flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='1~3', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True ) 2024-09-24 19:10:06 INFO flagdata::::casa Backup original flags before applying new flags 2024-09-24 19:10:06 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:06 INFO FlagVersion::saveFlagVersion Creating new backup flag file called flagdata_2 2024-09-24 19:10:06 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:06 INFO flagdata::::casa Manual mode is active 2024-09-24 19:10:06 INFO FlagCalTableHandler::selectData Original CalTable has 196 rows, and selected CalTable has 3 rows 2024-09-24 19:10:06 INFO flagdata::::casa Initializing the agents 2024-09-24 19:10:06 INFO AgentFlagger::initAgents There are initially 1 agents in the list. Agents: manual 2024-09-24 19:10:06 INFO Manual::setAgentParameters autocorr is 0 2024-09-24 19:10:06 INFO AgentFlagger::initAgents There are 1 valid agents in the list. Agents: manual 2024-09-24 19:10:06 INFO flagdata::::casa Running the agentflagger tool 2024-09-24 19:10:06 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:06 INFO FlagCalTableHandler:: Chunk = 1 [progress: 33%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:06 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:06 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:06 INFO FlagCalTableHandler:: Chunk = 2 [progress: 66%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:06 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:06 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:06 INFO FlagCalTableHandler:: Chunk = 3 [progress: 100%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:06 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:06 INFO FlagCalTableHandler::nextChunk ==================================================================================== 2024-09-24 19:10:06 INFO Manual::tableSummary => Percentage of data flagged in table selection: 100% 2024-09-24 19:10:06 INFO AgentFlagger::run => Writing flags to the MS 2024-09-24 19:10:06 INFO flagdata::::casa Task flagdata complete. Start time: 2024-09-24 19:10:06.404173 End time: 2024-09-24 19:10:06.442233 2024-09-24 19:10:06 INFO flagdata::::casa ##### End Task: flagdata ##### 2024-09-24 19:10:06 INFO flagdata::::casa ########################################## 2024-09-24 19:10:06 INFO rerefant::::casa ########################################## 2024-09-24 19:10:06 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:06 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01,VA02' ) 2024-09-24 19:10:06 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:06 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:10:06 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:06 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:06 INFO rerefant:::: Applying refant: VA01 (VA02) refantmode = flex (hold alternate refants' phase constant) when refant flagged 2024-09-24 19:10:06 INFO rerefant:::: At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), using refant VA02 (id=1) (alternate) 2024-09-24 19:10:06 INFO rerefant:::: NB: An alternate refant was used at least once to maintain 2024-09-24 19:10:06 INFO rerefant::::+ phase continuity where the user's preferred refant drops out. 2024-09-24 19:10:06 INFO rerefant::::+ Alternate refants are held constant in phase (_not_ zeroed) 2024-09-24 19:10:06 INFO rerefant::::+ during these periods, and the preferred refant may return at 2024-09-24 19:10:06 INFO rerefant::::+ a non-zero phase. This is generally harmless. 2024-09-24 19:10:06 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:10:06 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:10:07 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:06.443131 End time: 2024-09-24 19:10:06.597210 2024-09-24 19:10:07 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO flagdata::::casa ########################################## 2024-09-24 19:10:07 INFO flagdata::::casa ##### Begin Task: flagdata ##### 2024-09-24 19:10:07 INFO flagdata::::casa flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True ) 2024-09-24 19:10:07 INFO flagdata::::casa Backup original flags before applying new flags 2024-09-24 19:10:07 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:07 INFO FlagVersion::saveFlagVersion Creating new backup flag file called flagdata_3 2024-09-24 19:10:07 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:07 INFO flagdata::::casa Manual mode is active 2024-09-24 19:10:07 INFO FlagCalTableHandler::selectData Original CalTable has 196 rows, and selected CalTable has 7 rows 2024-09-24 19:10:07 INFO flagdata::::casa Initializing the agents 2024-09-24 19:10:07 INFO AgentFlagger::initAgents There are initially 1 agents in the list. Agents: manual 2024-09-24 19:10:07 INFO Manual::setAgentParameters autocorr is 0 2024-09-24 19:10:07 INFO AgentFlagger::initAgents There are 1 valid agents in the list. Agents: manual 2024-09-24 19:10:07 INFO flagdata::::casa Running the agentflagger tool 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler::nextChunk ==================================================================================== 2024-09-24 19:10:07 INFO Manual::tableSummary => Percentage of data flagged in table selection: 100% 2024-09-24 19:10:07 INFO AgentFlagger::run => Writing flags to the MS 2024-09-24 19:10:07 INFO flagdata::::casa Task flagdata complete. Start time: 2024-09-24 19:10:06.686893 End time: 2024-09-24 19:10:06.726905 2024-09-24 19:10:07 INFO flagdata::::casa ##### End Task: flagdata ##### 2024-09-24 19:10:07 INFO flagdata::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01,VA02' ) 2024-09-24 19:10:07 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:07 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:10:07 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:07 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:07 INFO rerefant:::: Applying refant: VA01 (VA02) refantmode = flex (hold alternate refants' phase constant) when refant flagged 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), using refant VA02 (id=1) (alternate) 2024-09-24 19:10:07 INFO rerefant:::: NB: An alternate refant was used at least once to maintain 2024-09-24 19:10:07 INFO rerefant::::+ phase continuity where the user's preferred refant drops out. 2024-09-24 19:10:07 INFO rerefant::::+ Alternate refants are held constant in phase (_not_ zeroed) 2024-09-24 19:10:07 INFO rerefant::::+ during these periods, and the preferred refant may return at 2024-09-24 19:10:07 INFO rerefant::::+ a non-zero phase. This is generally harmless. 2024-09-24 19:10:07 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:10:07 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:10:07 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:06.727778 End time: 2024-09-24 19:10:06.888391 2024-09-24 19:10:07 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='flex', refant='VA01' ) 2024-09-24 19:10:07 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:07 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:10:07 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:07 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:07 INFO rerefant:::: Applying refant: VA01 refantmode = flex (hold alternate refants' phase constant) when refant flagged 2024-09-24 19:10:07 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:10:07 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:10:07 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:06.947348 End time: 2024-09-24 19:10:07.107917 2024-09-24 19:10:07 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO flagdata::::casa ########################################## 2024-09-24 19:10:07 INFO flagdata::::casa ##### Begin Task: flagdata ##### 2024-09-24 19:10:07 INFO flagdata::::casa flagdata( vis='copycal.gcal', mode='manual', autocorr=False, inpfile='', reason='any', tbuff=0.0, spw='', field='', antenna='VA01', uvrange='', timerange='', correlation='', scan='', intent='', array='', observation='', feed='', clipminmax=[], datacolumn='DATA', clipoutside=True, channelavg=False, chanbin=1, timeavg=False, timebin='0s', clipzeros=False, quackinterval=1.0, quackmode='beg', quackincrement=False, tolerance=0.0, addantenna='', lowerlimit=0.0, upperlimit=90.0, ntime='scan', combinescans=False, timecutoff=4.0, freqcutoff=3.0, timefit='line', freqfit='poly', maxnpieces=7, flagdimension='freqtime', usewindowstats='none', halfwin=1, extendflags=True, winsize=3, timedev='', freqdev='', timedevscale=5.0, freqdevscale=5.0, spectralmax=1000000.0, spectralmin=0.0, antint_ref_antenna='', minchanfrac=0.6, verbose=False, extendpols=True, growtime=50.0, growfreq=50.0, growaround=False, flagneartime=False, flagnearfreq=False, minrel=0.0, maxrel=1.0, minabs=0, maxabs=-1, spwchan=False, spwcorr=False, basecnt=False, fieldcnt=False, name='Summary', action='apply', display='', flagbackup=True, savepars=False, cmdreason='', outfile='', overwrite=True, writeflags=True ) 2024-09-24 19:10:07 INFO flagdata::::casa Backup original flags before applying new flags 2024-09-24 19:10:07 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:07 INFO FlagVersion::saveFlagVersion Creating new backup flag file called flagdata_4 2024-09-24 19:10:07 INFO AgentFlagger::open Table type is Calibration 2024-09-24 19:10:07 INFO flagdata::::casa Manual mode is active 2024-09-24 19:10:07 INFO FlagCalTableHandler::selectData Original CalTable has 196 rows, and selected CalTable has 7 rows 2024-09-24 19:10:07 INFO flagdata::::casa Initializing the agents 2024-09-24 19:10:07 INFO AgentFlagger::initAgents There are initially 1 agents in the list. Agents: manual 2024-09-24 19:10:07 INFO Manual::setAgentParameters autocorr is 0 2024-09-24 19:10:07 INFO AgentFlagger::initAgents There are 1 valid agents in the list. Agents: manual 2024-09-24 19:10:07 INFO flagdata::::casa Running the agentflagger tool 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 1 [progress: 14%], Observation = 0~0, Scan = 1~1, Field = 0 (1331+30500002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 2 [progress: 28%], Observation = 0~0, Scan = 2~2, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 3 [progress: 42%], Observation = 0~0, Scan = 3~3, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 4 [progress: 57%], Observation = 0~0, Scan = 4~4, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 5 [progress: 71%], Observation = 0~0, Scan = 5~5, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 6 [progress: 85%], Observation = 0~0, Scan = 6~6, Field = 2 (N5921_2), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler:: ------------------------------------------------------------------------------------ 2024-09-24 19:10:07 INFO FlagCalTableHandler:: Chunk = 7 [progress: 100%], Observation = 0~0, Scan = 7~7, Field = 1 (1445+09900002_0), Spw = 0, Channels = 1, CalSolutions = [ Sol1 Sol2 ], Total Rows = 1 2024-09-24 19:10:07 INFO Manual::chunkSummary => Data flagged so far 100% (2/2) 2024-09-24 19:10:07 INFO FlagCalTableHandler::nextChunk ==================================================================================== 2024-09-24 19:10:07 INFO Manual::tableSummary => Percentage of data flagged in table selection: 100% 2024-09-24 19:10:07 INFO AgentFlagger::run => Writing flags to the MS 2024-09-24 19:10:07 INFO flagdata::::casa Task flagdata complete. Start time: 2024-09-24 19:10:07.195825 End time: 2024-09-24 19:10:07.234418 2024-09-24 19:10:07 INFO flagdata::::casa ##### End Task: flagdata ##### 2024-09-24 19:10:07 INFO flagdata::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:07 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01, VA02' ) 2024-09-24 19:10:07 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:07 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:10:07 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:07 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:07 INFO rerefant:::: Applying refant: VA01 (VA02) refantmode = strict (flag all antennas when refant flagged) 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/09:21:46.0 (Spw=0, Fld=0), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/09:28:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/09:40:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/09:50:45.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/10:22:30.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/10:34:30.0 (Spw=0, Fld=2), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant:::: At 1995/04/13/10:46:15.0 (Spw=0, Fld=1), refant (id=0) was flagged; flagging all antennas strictly. 2024-09-24 19:10:07 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:10:07 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:10:07 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:07.235266 End time: 2024-09-24 19:10:07.415606 2024-09-24 19:10:07 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:07 INFO rerefant::::casa ########################################## 2024-09-24 19:10:08 INFO rerefant::::casa ########################################## 2024-09-24 19:10:08 INFO rerefant::::casa ##### Begin Task: rerefant ##### 2024-09-24 19:10:08 INFO rerefant::::casa rerefant( vis='vis.ms', tablein='copycal.gcal', caltable='out.cal', refantmode='strict', refant='VA01' ) 2024-09-24 19:10:08 INFO rerefant::calibrater::open ****Using NEW VI2-driven calibrater tool**** 2024-09-24 19:10:08 INFO rerefant::calibrater::open Opening MS: vis.ms for calibration. 2024-09-24 19:10:08 INFO rerefant::Calibrater:: Initializing nominal selection to the whole MS. 2024-09-24 19:10:08 INFO rerefant::calibrater::rerefant Beginning rerefant--(MSSelection version)------- 2024-09-24 19:10:08 INFO rerefant:::: Applying refant: VA01 refantmode = strict (flag all antennas when refant flagged) 2024-09-24 19:10:08 INFO rerefant::Calibrater::reRefant Storing result in out.cal 2024-09-24 19:10:08 INFO rerefant:::: Writing solutions to table: out.cal 2024-09-24 19:10:08 INFO rerefant::::casa Task rerefant complete. Start time: 2024-09-24 19:10:07.509098 End time: 2024-09-24 19:10:07.689877 2024-09-24 19:10:08 INFO rerefant::::casa ##### End Task: rerefant ##### 2024-09-24 19:10:08 INFO rerefant::::casa ########################################## Using user configuration file /home/casatest/.casa/config.py Using matplotlib backend: agg CASA 6.7.0.4a14371.dev4 -- Common Astronomy Software Applications [6.7.0.4a14371.dev4] Running tests... ---------------------------------------------------------------------- ....... ---------------------------------------------------------------------- Ran 7 tests in 10.173s OK Generating XML reports...